RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 BVES-AS1Q5T3Y7 98 aa10.3□□□□□ -0.76
SCN1B-202ENST00000415950 ZNF562Q6V9R5 426 aa10.3□□□□□ -0.76
SCN1B-202ENST00000415950 C11orf52Q96A22 123 aa10.3□□□□□ -0.76
SCN1B-202ENST00000415950 SHANK2-AS3Q9BTD1 123 aa10.3□□□□□ -0.76
SCN1B-202ENST00000415950 GAGE1Q13065 139 aa10.3□□□□□ -0.76
SCN1B-202ENST00000415950 FAM104BQ5XKR9 115 aa10.3□□□□□ -0.76
SCN1B-202ENST00000415950 GAGE2AQ6NT46 116 aa10.3□□□□□ -0.76
SCN1B-202ENST00000415950 C2orf66Q6UXQ4 117 aa10.3□□□□□ -0.76
SCN1B-202ENST00000415950 Q8TCH9 128 aa10.3□□□□□ -0.76
SCN1B-202ENST00000415950 CHD8Q9HCK8 2581 aa10.3□□□□□ -0.76
SCN1B-202ENST00000415950 ARHGAP32A7KAX9 2087 aa10.3□□□□□ -0.76
SCN1B-202ENST00000415950 C6orf226Q5I0X4 101 aa10.3□□□□□ -0.76
SCN1B-202ENST00000415950 OBSL1O75147 1896 aa10.29□□□□□ -0.76
SCN1B-202ENST00000415950 TIMM21Q9BVV7 248 aa10.29□□□□□ -0.76
SCN1B-202ENST00000415950 NUP210Q8TEM1 1887 aaPredicted RBP10.29□□□□□ -0.76
SCN1B-202ENST00000415950 H3BMG7 143 aa10.29□□□□□ -0.76
SCN1B-202ENST00000415950 LINC01559Q495D7 138 aa10.29□□□□□ -0.76
SCN1B-202ENST00000415950 RPL36AP83881 106 aaKnown RBP10.29□□□□□ -0.76
SCN1B-202ENST00000415950 PCP2Q8IVA1 136 aa10.29□□□□□ -0.76
SCN1B-202ENST00000415950 RPL36ALQ969Q0 106 aaKnown RBP10.29□□□□□ -0.76
SCN1B-202ENST00000415950 SRSF8Q9BRL6 282 aaKnown RBP10.29□□□□□ -0.76
SCN1B-202ENST00000415950 TP53TG1Q9Y2A0 90 aa10.29□□□□□ -0.76
SCN1B-202ENST00000415950 A0A0G2JNJ9 132 aa10.28□□□□□ -0.76
SCN1B-202ENST00000415950 NDUFB8O95169 186 aa10.28□□□□□ -0.76
SCN1B-202ENST00000415950 FXYD5Q96DB9 178 aa10.28□□□□□ -0.76
SCN1B-202ENST00000415950 Q9UFV3 132 aa10.28□□□□□ -0.76
SCN1B-202ENST00000415950 G3V318 75 aa10.28□□□□□ -0.76
SCN1B-202ENST00000415950 EFNA4P52798 201 aa10.28□□□□□ -0.76
SCN1B-202ENST00000415950 LYPD1Q8N2G4 141 aa10.28□□□□□ -0.76
SCN1B-202ENST00000415950 MRPL35Q9NZE8 188 aaKnown RBP10.28□□□□□ -0.76
SCN1B-202ENST00000415950 DKK2Q9UBU2 259 aa10.28□□□□□ -0.76
SCN1B-202ENST00000415950 TECTAO75443 2155 aa10.28□□□□□ -0.76
SCN1B-202ENST00000415950 EML5Q05BV3 1969 aa10.28□□□□□ -0.76
SCN1B-202ENST00000415950 PROP1O75360 226 aa10.28□□□□□ -0.76
SCN1B-202ENST00000415950 RPL35AP18077 110 aaKnown RBP10.28□□□□□ -0.76
SCN1B-202ENST00000415950 HLA-DMBP28068 263 aa10.28□□□□□ -0.76
SCN1B-202ENST00000415950 NSUN5P1Q3KNT7 163 aa10.28□□□□□ -0.76
SCN1B-202ENST00000415950 MRPL51Q4U2R6 128 aaKnown RBP10.28□□□□□ -0.76
SCN1B-202ENST00000415950 HCFC1P51610 2035 aa10.28□□□□□ -0.76
SCN1B-202ENST00000415950 PIP4P2Q8N4L2 257 aa10.27□□□□□ -0.76
SCN1B-202ENST00000415950 PKD1L2Q7Z442 2459 aa10.27□□□□□ -0.76
SCN1B-202ENST00000415950 NAV2Q8IVL1 2488 aa10.27□□□□□ -0.77
SCN1B-202ENST00000415950 IGHV3-16A0A0C4DH30 117 aa10.27□□□□□ -0.77
SCN1B-202ENST00000415950 C9orf118A6NHY6 69 aa10.27□□□□□ -0.77
SCN1B-202ENST00000415950 ITGB1BP1O14713 200 aa10.27□□□□□ -0.77
SCN1B-202ENST00000415950 FAM120AOSQ5T036 256 aa10.27□□□□□ -0.77
SCN1B-202ENST00000415950 IL17RELQ6ZVW7 336 aa10.27□□□□□ -0.77
SCN1B-202ENST00000415950 IGLC7A0M8Q6 106 aa10.27□□□□□ -0.77
SCN1B-202ENST00000415950 E7EUB6 86 aa10.27□□□□□ -0.77
SCN1B-202ENST00000415950 MRPL52Q86TS9 123 aaKnown RBP10.27□□□□□ -0.77
SCN1B-202ENST00000415950 LY6G5BQ8NDX9 201 aa10.27□□□□□ -0.77
SCN1B-202ENST00000415950 RNF138Q8WVD3 245 aa10.27□□□□□ -0.77
SCN1B-202ENST00000415950 YPEL4Q96NS1 127 aa10.27□□□□□ -0.77
SCN1B-202ENST00000415950 SIGLEC8Q9NYZ4 499 aa10.27□□□□□ -0.77
SCN1B-202ENST00000415950 SPTBN4Q9H254 2564 aa10.27□□□□□ -0.77
SCN1B-202ENST00000415950 SAA4P35542 130 aa10.26□□□□□ -0.77
SCN1B-202ENST00000415950 BRWD1-AS2P59051 145 aa10.26□□□□□ -0.77
SCN1B-202ENST00000415950 TCF15Q12870 199 aa10.26□□□□□ -0.77
SCN1B-202ENST00000415950 PIEZO1Q92508 2521 aa10.26□□□□□ -0.77
SCN1B-202ENST00000415950 LGALS1P09382 135 aaKnown RBP10.26□□□□□ -0.77
SCN1B-202ENST00000415950 SYNJ2BPP57105 145 aa10.26□□□□□ -0.77
SCN1B-202ENST00000415950 NPYP01303 97 aa10.26□□□□□ -0.77
SCN1B-202ENST00000415950 TRBV19A0A075B6N1 114 aa10.26□□□□□ -0.77
SCN1B-202ENST00000415950 GATA1P15976 413 aaPredicted RBP10.26□□□□□ -0.77
SCN1B-202ENST00000415950 MRPL36Q9P0J6 103 aaKnown RBP10.26□□□□□ -0.77
SCN1B-202ENST00000415950 KMT2EQ8IZD2 1858 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 DEFB130BP0DP73 79 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 DEFB130AP0DP74 79 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 SPINK13Q1W4C9 94 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 ANKRD39Q53RE8 183 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 KLF12Q9Y4X4 402 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 FREM2Q5SZK8 3169 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 RASL10AQ92737 203 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 RNF5Q99942 180 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 BPESC1Q9GZL8 116 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 MSRB2Q9Y3D2 182 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 INS-IGF2F8WCM5 200 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 INSP01308 110 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 COX8AP10176 69 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 ANXA2RQ3ZCQ2 193 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 PATE2Q6UY27 113 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 RS1O15537 224 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 DEFB131AP59861 70 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 Q6ZSR3 168 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 PRADC1Q9BSG0 188 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 GFRA4Q9GZZ7 299 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 KLK9Q9UKQ9 250 aa10.25□□□□□ -0.77
SCN1B-202ENST00000415950 TRIOO75962 3097 aa10.24□□□□□ -0.77
SCN1B-202ENST00000415950 C2orf16Q68DN1 1984 aa10.24□□□□□ -0.77
SCN1B-202ENST00000415950 MYMXA0A1B0GTQ4 84 aa10.24□□□□□ -0.77
SCN1B-202ENST00000415950 E7EQL1 145 aa10.24□□□□□ -0.77
SCN1B-202ENST00000415950 FNDC10F2Z333 226 aa10.24□□□□□ -0.77
SCN1B-202ENST00000415950 RITA1Q96K30 269 aa10.24□□□□□ -0.77
SCN1B-202ENST00000415950 ZNF106Q9H2Y7 1883 aaKnown RBP10.24□□□□□ -0.77
SCN1B-202ENST00000415950 ATP6V0E1O15342 81 aa10.24□□□□□ -0.77
SCN1B-202ENST00000415950 PFN2P35080 140 aa10.24□□□□□ -0.77
SCN1B-202ENST00000415950 PRR25Q96S07 402 aa10.24□□□□□ -0.77
SCN1B-202ENST00000415950 RNF114Q9Y508 228 aa10.24□□□□□ -0.77
SCN1B-202ENST00000415950 VWC2LB2RUY7 222 aa10.23□□□□□ -0.77
SCN1B-202ENST00000415950 MSRB1Q9NZV6 116 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms