RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 USP9XQ93008 2570 aaPredicted RBP9.44□□□□□ -0.9
UBA3-203ENST00000415609 BRI3O95415 125 aa9.44□□□□□ -0.9
UBA3-203ENST00000415609 G0S2P27469 103 aa9.44□□□□□ -0.9
UBA3-203ENST00000415609 FOXE3Q13461 319 aa9.44□□□□□ -0.9
UBA3-203ENST00000415609 PMCHL2Q9BQD1 86 aa9.44□□□□□ -0.9
UBA3-203ENST00000415609 ST20Q9HBF5 79 aa9.44□□□□□ -0.9
UBA3-203ENST00000415609 C11orf21Q9P2W6 132 aa9.44□□□□□ -0.9
UBA3-203ENST00000415609 ZFHX3Q15911 3703 aa9.44□□□□□ -0.9
UBA3-203ENST00000415609 RPL11P62913 178 aaKnown RBP9.43□□□□□ -0.9
UBA3-203ENST00000415609 COL5A1-AS1Q5SY13 56 aa9.43□□□□□ -0.9
UBA3-203ENST00000415609 PRSS57Q6UWY2 283 aa9.43□□□□□ -0.9
UBA3-203ENST00000415609 OR8A1Q8NGG7 326 aa9.43□□□□□ -0.9
UBA3-203ENST00000415609 NPFFR1Q9GZQ6 430 aa9.43□□□□□ -0.9
UBA3-203ENST00000415609 SPG11Q96JI7 2443 aa9.43□□□□□ -0.9
UBA3-203ENST00000415609 A0A096LNJ9 63 aa9.43□□□□□ -0.9
UBA3-203ENST00000415609 PRB1P04280 392 aa9.43□□□□□ -0.9
UBA3-203ENST00000415609 SLC25A16P16260 332 aa9.43□□□□□ -0.9
UBA3-203ENST00000415609 GATA3P23771 443 aa9.43□□□□□ -0.9
UBA3-203ENST00000415609 LINC01545Q5VT33 79 aa9.43□□□□□ -0.9
UBA3-203ENST00000415609 RNF185Q96GF1 192 aa9.43□□□□□ -0.9
UBA3-203ENST00000415609 MRPS16Q9Y3D3 137 aaKnown RBP9.43□□□□□ -0.9
UBA3-203ENST00000415609 A0A0G2JLM5 398 aa9.42□□□□□ -0.9
UBA3-203ENST00000415609 UTP20O75691 2785 aaKnown RBP9.42□□□□□ -0.9
UBA3-203ENST00000415609 FXYD7P58549 80 aa9.42□□□□□ -0.9
UBA3-203ENST00000415609 GPHB5Q86YW7 130 aa9.42□□□□□ -0.9
UBA3-203ENST00000415609 CELSR2Q9HCU4 2923 aa9.41□□□□□ -0.9
UBA3-203ENST00000415609 J3KRW8 73 aa9.41□□□□□ -0.9
UBA3-203ENST00000415609 TCF21O43680 179 aa9.41□□□□□ -0.9
UBA3-203ENST00000415609 IGLV1-40P01703 118 aa9.41□□□□□ -0.9
UBA3-203ENST00000415609 HBDP02042 147 aa9.41□□□□□ -0.9
UBA3-203ENST00000415609 PPBPP02775 128 aa9.41□□□□□ -0.9
UBA3-203ENST00000415609 ZNF25P17030 456 aaPredicted RBP9.41□□□□□ -0.9
UBA3-203ENST00000415609 TFPI2P48307 235 aa9.41□□□□□ -0.9
UBA3-203ENST00000415609 TMEM95Q3KNT9 176 aa9.41□□□□□ -0.9
UBA3-203ENST00000415609 Q6ZQT7 251 aa9.41□□□□□ -0.9
UBA3-203ENST00000415609 OR10J6PQ8NGY7 276 aa9.41□□□□□ -0.9
UBA3-203ENST00000415609 MAP1LC3AQ9H492 121 aa9.41□□□□□ -0.9
UBA3-203ENST00000415609 TP73-AS1Q9UF72 201 aa9.41□□□□□ -0.9
UBA3-203ENST00000415609 ACACBO00763 2458 aa9.41□□□□□ -0.9
UBA3-203ENST00000415609 MAP1AP78559 2803 aaPredicted RBP9.41□□□□□ -0.9
UBA3-203ENST00000415609 IGKV3-7A0A075B6H7 116 aa9.41□□□□□ -0.9
UBA3-203ENST00000415609 HINT1P49773 126 aaPredicted RBP9.41□□□□□ -0.9
UBA3-203ENST00000415609 PRR9Q5T870 116 aa9.41□□□□□ -0.9
UBA3-203ENST00000415609 LINC01356Q8N9X3 169 aa9.41□□□□□ -0.9
UBA3-203ENST00000415609 PPP1R14DQ9NXH3 145 aa9.41□□□□□ -0.9
UBA3-203ENST00000415609 SOCS3O14543 225 aa9.4□□□□□ -0.9
UBA3-203ENST00000415609 OVOL1O14753 267 aa9.4□□□□□ -0.9
UBA3-203ENST00000415609 GAS8-AS1O95177 125 aa9.4□□□□□ -0.9
UBA3-203ENST00000415609 IGHV4-59P01825 116 aa9.4□□□□□ -0.9
UBA3-203ENST00000415609 EVI2AP22794 236 aa9.4□□□□□ -0.9
UBA3-203ENST00000415609 DEFB112Q30KQ8 113 aa9.4□□□□□ -0.9
UBA3-203ENST00000415609 TM4SF20Q53R12 229 aa9.4□□□□□ -0.9
UBA3-203ENST00000415609 STPG4Q8N801 248 aa9.4□□□□□ -0.9
UBA3-203ENST00000415609 IGHV7-4-1A0A0J9YVY3 117 aa9.39□□□□□ -0.91
UBA3-203ENST00000415609 COX6B1P14854 86 aa9.39□□□□□ -0.91
UBA3-203ENST00000415609 DEFB1P60022 68 aa9.39□□□□□ -0.91
UBA3-203ENST00000415609 CFHR3Q02985 330 aa9.39□□□□□ -0.91
UBA3-203ENST00000415609 SMIM15Q7Z3B0 74 aa9.39□□□□□ -0.91
UBA3-203ENST00000415609 LINC00477Q96M19 166 aa9.39□□□□□ -0.91
UBA3-203ENST00000415609 RHPN1-AS1Q9BWJ2 59 aa9.39□□□□□ -0.91
UBA3-203ENST00000415609 UFC1Q9Y3C8 167 aa9.39□□□□□ -0.91
UBA3-203ENST00000415609 LENEPQ9Y5L5 61 aa9.39□□□□□ -0.91
UBA3-203ENST00000415609 SELENOKQ9Y6D0 94 aa9.39□□□□□ -0.91
UBA3-203ENST00000415609 MYO18BQ8IUG5 2567 aa9.39□□□□□ -0.91
UBA3-203ENST00000415609 CRYBG3Q68DQ2 2970 aa9.39□□□□□ -0.91
UBA3-203ENST00000415609 H3BVH4 76 aa9.39□□□□□ -0.91
UBA3-203ENST00000415609 TNFRSF6BO95407 300 aa9.39□□□□□ -0.91
UBA3-203ENST00000415609 SPANXN1Q5VSR9 72 aa9.39□□□□□ -0.91
UBA3-203ENST00000415609 SLC25A34Q6PIV7 304 aa9.39□□□□□ -0.91
UBA3-203ENST00000415609 MAPK1IP1LQ8NDC0 245 aa9.39□□□□□ -0.91
UBA3-203ENST00000415609 DAZ1Q9NQZ3 744 aaKnown RBP9.39□□□□□ -0.91
UBA3-203ENST00000415609 MS4A6AQ9H2W1 248 aa9.38□□□□□ -0.91
UBA3-203ENST00000415609 SCRT2Q9NQ03 307 aa9.38□□□□□ -0.91
UBA3-203ENST00000415609 PEF1Q9UBV8 284 aaKnown RBP9.38□□□□□ -0.91
UBA3-203ENST00000415609 GOLT1BQ9Y3E0 138 aa9.38□□□□□ -0.91
UBA3-203ENST00000415609 A1L4Q6 167 aa9.38□□□□□ -0.91
UBA3-203ENST00000415609 TGFAP01135 160 aa9.38□□□□□ -0.91
UBA3-203ENST00000415609 GATA1P15976 413 aaPredicted RBP9.38□□□□□ -0.91
UBA3-203ENST00000415609 ZFAND2AQ8N6M9 145 aa9.38□□□□□ -0.91
UBA3-203ENST00000415609 TMEM208Q9BTX3 173 aa9.38□□□□□ -0.91
UBA3-203ENST00000415609 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.37□□□□□ -0.912e-6■■■■■ 38.3
UBA3-203ENST00000415609 F6UB75 175 aa9.37□□□□□ -0.91
UBA3-203ENST00000415609 CACNG7P62955 275 aa9.37□□□□□ -0.91
UBA3-203ENST00000415609 IFI27L1Q96BM0 104 aa9.37□□□□□ -0.91
UBA3-203ENST00000415609 NXT2Q9NPJ8 142 aaKnown RBP9.37□□□□□ -0.91
UBA3-203ENST00000415609 A0A096LNT2 108 aa9.36□□□□□ -0.91
UBA3-203ENST00000415609 TRAV21A0A0B4J279 112 aa9.36□□□□□ -0.91
UBA3-203ENST00000415609 J3QLI3 93 aa9.36□□□□□ -0.91
UBA3-203ENST00000415609 SNAI2O43623 268 aa9.36□□□□□ -0.91
UBA3-203ENST00000415609 SRD5A1P18405 259 aa9.36□□□□□ -0.91
UBA3-203ENST00000415609 WFDC3Q8IUB2 231 aa9.36□□□□□ -0.91
UBA3-203ENST00000415609 SMPXQ9UHP9 88 aa9.36□□□□□ -0.91
UBA3-203ENST00000415609 EDN2P20800 178 aa9.36□□□□□ -0.91
UBA3-203ENST00000415609 PSMB8P28062 276 aa9.36□□□□□ -0.91
UBA3-203ENST00000415609 LEPP41159 167 aa9.36□□□□□ -0.91
UBA3-203ENST00000415609 LGALS9BQ3B8N2 356 aa9.36□□□□□ -0.91
UBA3-203ENST00000415609 LGALS9CQ6DKI2 356 aa9.36□□□□□ -0.91
UBA3-203ENST00000415609 OR2K2Q8NGT1 345 aa9.36□□□□□ -0.91
UBA3-203ENST00000415609 BBC3Q96PG8 261 aaPredicted RBP9.36□□□□□ -0.91
UBA3-203ENST00000415609 ZNF580Q9UK33 172 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms