RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 LYZL1Q6UWQ5 148 aa10.35□□□□□ -0.75
SSR4P1-201ENST00000415143 PRSS57Q6UWY2 283 aa10.35□□□□□ -0.75
SSR4P1-201ENST00000415143 C9orf47Q6ZRZ4 202 aa10.35□□□□□ -0.75
SSR4P1-201ENST00000415143 Q96MF0 132 aa10.35□□□□□ -0.75
SSR4P1-201ENST00000415143 RCHY1Q96PM5 261 aa10.35□□□□□ -0.75
SSR4P1-201ENST00000415143 NDUFAF3Q9BU61 184 aa10.35□□□□□ -0.75
SSR4P1-201ENST00000415143 PEF1Q9UBV8 284 aaKnown RBP10.35□□□□□ -0.75
SSR4P1-201ENST00000415143 UFC1Q9Y3C8 167 aa10.35□□□□□ -0.75
SSR4P1-201ENST00000415143 IGHV3-66A0A0C4DH42 116 aa10.34□□□□□ -0.75
SSR4P1-201ENST00000415143 IGHG4P01861 327 aa10.34□□□□□ -0.75
SSR4P1-201ENST00000415143 CTRLP40313 264 aa10.34□□□□□ -0.75
SSR4P1-201ENST00000415143 ID1P41134 155 aa10.34□□□□□ -0.75
SSR4P1-201ENST00000415143 BLCAPP62952 87 aa10.34□□□□□ -0.75
SSR4P1-201ENST00000415143 DEFB112Q30KQ8 113 aa10.34□□□□□ -0.75
SSR4P1-201ENST00000415143 SMIM15Q7Z3B0 74 aa10.34□□□□□ -0.75
SSR4P1-201ENST00000415143 OR10J6PQ8NGY7 276 aa10.34□□□□□ -0.75
SSR4P1-201ENST00000415143 C20orf144Q9BQM9 153 aa10.34□□□□□ -0.75
SSR4P1-201ENST00000415143 A0A096LNT2 108 aa10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 KIR2DL5BA0A0G2JN68 375 aa10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 KIR2DL5BA0A0G2JPC4 375 aa10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 ZNF207O43670 478 aaKnown RBP10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 AVPP01185 164 aa10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 PPBPP02775 128 aa10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 BTF3P20290 206 aaKnown RBP10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 HLA-DMBP28068 263 aa10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 CFHR3Q02985 330 aa10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 FOXE3Q13461 319 aa10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 MRPL52Q86TS9 123 aaKnown RBP10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 GPHB5Q86YW7 130 aa10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 KIR2DL5AQ8N109 375 aa10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 KLHDC1Q8N7A1 406 aa10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 ZNF738Q8NE65 137 aa10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 AGPAT4-IT1Q9H0P7 198 aa10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 DAZ1Q9NQZ3 744 aaKnown RBP10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 HSPB8Q9UJY1 196 aa10.33□□□□□ -0.76
SSR4P1-201ENST00000415143 TMSB15BA0A087X1C1 80 aa10.32□□□□□ -0.76
SSR4P1-201ENST00000415143 TRAV8-2A0A0B4J237 113 aa10.32□□□□□ -0.76
SSR4P1-201ENST00000415143 IGHV7-4-1A0A0J9YVY3 117 aa10.32□□□□□ -0.76
SSR4P1-201ENST00000415143 TRBV7-9A0A0J9YWB2 115 aa10.32□□□□□ -0.76
SSR4P1-201ENST00000415143 FAM181BA6NEQ2 426 aa10.32□□□□□ -0.76
SSR4P1-201ENST00000415143 ERCC8Q13216 396 aa10.32□□□□□ -0.76
SSR4P1-201ENST00000415143 FAM104BQ5XKR9 115 aa10.32□□□□□ -0.76
SSR4P1-201ENST00000415143 IGFL4Q6B9Z1 124 aa10.32□□□□□ -0.76
SSR4P1-201ENST00000415143 FA2HQ7L5A8 372 aa10.32□□□□□ -0.76
SSR4P1-201ENST00000415143 PRSS3P2Q8NHM4 247 aa10.32□□□□□ -0.76
SSR4P1-201ENST00000415143 Q8TAT8 98 aa10.32□□□□□ -0.76
SSR4P1-201ENST00000415143 RNF223E7ERA6 249 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 IGHV3-11P01762 117 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 IGHV4-59P01825 116 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 ELANEP08246 267 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 C3orf79P0CE67 100 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 IGLC6P0CF74 106 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 IGHV4-31P0DP07 118 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 CACNG7P62955 275 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 TWIST1Q15672 202 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 Q6YL49 198 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 ORMDL3Q8N138 153 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 FAM19A2Q8N3H0 131 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 RNF182Q8N6D2 247 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 TMEM191AQ9H0A3 160 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 VPREB3Q9UKI3 123 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 LAMTOR2Q9Y2Q5 125 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 U3KQK5 164 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 WNK2Q9Y3S1 2297 aa10.31□□□□□ -0.76
SSR4P1-201ENST00000415143 IGHV3OR16-13A0A075B7E8 117 aa10.3□□□□□ -0.76
SSR4P1-201ENST00000415143 IGHV3-49A0A0A0MS15 119 aa10.3□□□□□ -0.76
SSR4P1-201ENST00000415143 IGHV3-74A0A0B4J1X5 117 aa10.3□□□□□ -0.76
SSR4P1-201ENST00000415143 PRAC2D3DTV9 90 aa10.3□□□□□ -0.76
SSR4P1-201ENST00000415143 LEPROTL1O95214 131 aa10.3□□□□□ -0.76
SSR4P1-201ENST00000415143 RPL11P62913 178 aaKnown RBP10.3□□□□□ -0.76
SSR4P1-201ENST00000415143 IL17RELQ6ZVW7 336 aa10.3□□□□□ -0.76
SSR4P1-201ENST00000415143 C14orf144Q96I85 54 aa10.3□□□□□ -0.76
SSR4P1-201ENST00000415143 MIEN1Q9BRT3 115 aa10.3□□□□□ -0.76
SSR4P1-201ENST00000415143 TMEM70Q9BUB7 260 aa10.3□□□□□ -0.76
SSR4P1-201ENST00000415143 CNFNQ9BYD5 112 aa10.3□□□□□ -0.76
SSR4P1-201ENST00000415143 SMPXQ9UHP9 88 aa10.3□□□□□ -0.76
SSR4P1-201ENST00000415143 FSHBP01225 129 aa10.29□□□□□ -0.76
SSR4P1-201ENST00000415143 PSMB8P28062 276 aa10.29□□□□□ -0.76
SSR4P1-201ENST00000415143 ZNF80P51504 273 aaPredicted RBP10.29□□□□□ -0.76
SSR4P1-201ENST00000415143 PRELID3AQ96N28 172 aa10.29□□□□□ -0.76
SSR4P1-201ENST00000415143 RHPN1-AS1Q9BWJ2 59 aa10.29□□□□□ -0.76
SSR4P1-201ENST00000415143 MAP1LC3CQ9BXW4 147 aa10.29□□□□□ -0.76
SSR4P1-201ENST00000415143 KLK15Q9H2R5 256 aa10.29□□□□□ -0.76
SSR4P1-201ENST00000415143 AP5S1Q9NUS5 200 aa10.29□□□□□ -0.76
SSR4P1-201ENST00000415143 TRAV21A0A0B4J279 112 aa10.28□□□□□ -0.76
SSR4P1-201ENST00000415143 CKS2P33552 79 aa10.28□□□□□ -0.76
SSR4P1-201ENST00000415143 PET117Q6UWS5 81 aa10.28□□□□□ -0.76
SSR4P1-201ENST00000415143 UNQ9165/PRO28630Q6UXU0 137 aa10.28□□□□□ -0.76
SSR4P1-201ENST00000415143 OR10AG1Q8NH19 301 aa10.28□□□□□ -0.76
SSR4P1-201ENST00000415143 ABCA1O95477 2261 aa10.27□□□□□ -0.76
SSR4P1-201ENST00000415143 M0R143 59 aa10.27□□□□□ -0.77
SSR4P1-201ENST00000415143 TRBV12-3P01733 135 aa10.27□□□□□ -0.77
SSR4P1-201ENST00000415143 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.27□□□□□ -0.77
SSR4P1-201ENST00000415143 IGHV1-24A0A0C4DH33 117 aa10.26□□□□□ -0.77
SSR4P1-201ENST00000415143 TMEM213A2RRL7 107 aa10.26□□□□□ -0.77
SSR4P1-201ENST00000415143 D6R8Y8 96 aa10.26□□□□□ -0.77
SSR4P1-201ENST00000415143 M0QZ24 198 aa10.26□□□□□ -0.77
SSR4P1-201ENST00000415143 ZNF705AQ6ZN79 300 aaPredicted RBP10.26□□□□□ -0.77
SSR4P1-201ENST00000415143 UQCR10Q9UDW1 63 aa10.26□□□□□ -0.77
SSR4P1-201ENST00000415143 PAM16Q9Y3D7 125 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms