RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 KLF3P57682 345 aaPredicted RBP1.7□□□□□ -2.14
MCF2-204ENST00000414978 KRTAP10-3P60369 221 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 RPS20P60866 119 aaKnown RBP1.7□□□□□ -2.14
MCF2-204ENST00000414978 ATP5G2Q06055 141 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 DHRS2Q13268 280 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 C1orf194Q5T5A4 169 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 LAMTOR1Q6IAA8 161 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 KRTAP5-3Q6L8H2 238 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 LHFPL1Q86WI0 220 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 Q8N7P7 452 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 WFDC9Q8NEX5 89 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 OR2T35Q8NGX2 323 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 ORAOV1Q8WV07 137 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 ZNF2Q9BSG1 426 aaPredicted RBP1.7□□□□□ -2.14
MCF2-204ENST00000414978 PDCD10Q9BUL8 212 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 WASHC3Q9Y3C0 194 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 DNAH2Q9P225 4427 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 KIAA2026Q5HYC2 2103 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 IGKV1-6A0A0C4DH72 117 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 ZNF98A6NK75 572 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 ATP6V1G2-DDX39BF2Z307 99 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 K7EIL1 84 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 RBFOX2O43251 390 aaKnown RBP eCLIP1.7□□□□□ -2.14
MCF2-204ENST00000414978 GLRXP35754 106 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 FXYD4P59646 89 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 RAB4BP61018 213 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 BAMBIQ13145 260 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 SURF2Q15527 256 aaPredicted RBP1.7□□□□□ -2.14
MCF2-204ENST00000414978 SMIM21Q3B7S5 101 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 TMEM128Q5BJH2 165 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 LY6G5BQ8NDX9 201 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 OR10G4Q8NGN3 311 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 TMEM222Q9H0R3 208 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 HSPB11Q9Y547 144 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 ARID1AO14497 2285 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 TMEM223A0PJW6 202 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 OR5H14A6NHG9 310 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 UPK2O00526 184 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 BET1O15155 118 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 HMGB3O15347 200 aaKnown RBP1.69□□□□□ -2.14
MCF2-204ENST00000414978 SNAPC5O75971 98 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 SIX6O95475 246 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 OR2H2O95918 312 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 ZNF728P0DKX0 622 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 SULT1A1P50225 295 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 EDDM3AQ14507 147 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 LPCAT3Q6P1A2 487 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 WDR86Q86TI4 376 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 SGPP2Q8IWX5 399 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 CYYR1Q96J86 154 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 ZNF355PQ9NSJ1 428 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 TAAR3PQ9P1P4 343 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 TRAPPC2LQ9UL33 140 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 WSB1Q9Y6I7 421 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 TGP01266 2768 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 FXYD6-FXYD2A0A087WZ82 144 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 A0A1B0GVX0 72 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 SFT2D2O95562 160 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 NAPSAO96009 420 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 CTSDP07339 412 aaPredicted RBP1.69□□□□□ -2.14
MCF2-204ENST00000414978 MUC1P15941 1255 aaPredicted RBP1.69□□□□□ -2.14
MCF2-204ENST00000414978 NFYAP23511 347 aaPredicted RBP1.69□□□□□ -2.14
MCF2-204ENST00000414978 S100GP29377 79 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 H2BFSP57053 126 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 SNRPD2P62316 118 aaKnown RBP1.69□□□□□ -2.14
MCF2-204ENST00000414978 TNFAIP6P98066 277 aaPredicted RBP1.69□□□□□ -2.14
MCF2-204ENST00000414978 AADACL3Q5VUY0 350 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 Q6ZR03 302 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 Q6ZS49 121 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 ZNF826PQ6ZT77 177 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 LRP11Q86VZ4 500 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 ORMDL3Q8N138 153 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 SLC25A29Q8N8R3 303 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 OR1L1Q8NH94 360 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 FXYD6Q9H0Q3 95 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 RPUSD1Q9UJJ7 312 aaKnown RBP1.69□□□□□ -2.14
MCF2-204ENST00000414978 TLN2Q9Y4G6 2542 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 AKAP6Q13023 2319 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 HUWE1Q7Z6Z7 4374 aaKnown RBP1.69□□□□□ -2.14
MCF2-204ENST00000414978 IGHV2-26A0A0B4J1V2 119 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 TMEM30CPA0ZSE6 113 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 RFPL4AA6NLU0 287 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 RFPL4AL1F8VTS6 287 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 PPYP01298 95 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 IFNA21P01568 189 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 SCTP09683 121 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 MDKP21741 143 aaPredicted RBP1.69□□□□□ -2.14
MCF2-204ENST00000414978 CD200P41217 278 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 PIGPP57054 158 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 HLA-DRB3P79483 266 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 RPL19P84098 196 aaKnown RBP1.69□□□□□ -2.14
MCF2-204ENST00000414978 RHEBQ15382 184 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 RNASE13Q5GAN3 156 aaKnown RBP1.69□□□□□ -2.14
MCF2-204ENST00000414978 Q6P435 159 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 C9orf62Q8N4C0 152 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 MRPL30Q8TCC3 161 aaKnown RBP1.69□□□□□ -2.14
MCF2-204ENST00000414978 RTN4IP1Q8WWV3 396 aaPredicted RBP1.69□□□□□ -2.14
MCF2-204ENST00000414978 NDFIP1Q9BT67 221 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 RASL12Q9NYN1 266 aa1.69□□□□□ -2.14
MCF2-204ENST00000414978 TP73-AS1Q9UF72 201 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 226.6 ms