RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 CSN1S1P47710 185 aa10.72□□□□□ -0.69
ACTB-202ENST00000414620 IBA57Q5T440 356 aaKnown RBP10.72□□□□□ -0.69
ACTB-202ENST00000414620 SCGB1C1Q8TD33 95 aa10.72□□□□□ -0.69
ACTB-202ENST00000414620 C18orf15Q96N68 181 aa10.72□□□□□ -0.69
ACTB-202ENST00000414620 MARVELD1Q9BSK0 173 aa10.72□□□□□ -0.69
ACTB-202ENST00000414620 MBD2Q9UBB5 411 aa10.72□□□□□ -0.69
ACTB-202ENST00000414620 RPH3ALQ9UNE2 315 aa10.72□□□□□ -0.69
ACTB-202ENST00000414620 RYR1P21817 5038 aa10.72□□□□□ -0.69
ACTB-202ENST00000414620 IFNA5P01569 189 aa10.71□□□□□ -0.69
ACTB-202ENST00000414620 PET100P0DJ07 73 aa10.71□□□□□ -0.69
ACTB-202ENST00000414620 ZNF415Q09FC8 603 aa10.71□□□□□ -0.69
ACTB-202ENST00000414620 KHDC3LQ587J8 217 aa10.71□□□□□ -0.69
ACTB-202ENST00000414620 ST6GAL2Q96JF0 529 aa10.71□□□□□ -0.69
ACTB-202ENST00000414620 PAX4O43316 350 aa10.7□□□□□ -0.7
ACTB-202ENST00000414620 RPL12P30050 165 aaKnown RBP10.7□□□□□ -0.7
ACTB-202ENST00000414620 SPATA12Q7Z6I5 190 aa10.7□□□□□ -0.7
ACTB-202ENST00000414620 HYLS1Q96M11 299 aa10.7□□□□□ -0.7
ACTB-202ENST00000414620 KRTAP4-5Q9BYR2 181 aa10.7□□□□□ -0.7
ACTB-202ENST00000414620 DIRC3C9JPN6 131 aa10.69□□□□□ -0.7
ACTB-202ENST00000414620 TAS2R45P59539 299 aa10.69□□□□□ -0.7
ACTB-202ENST00000414620 DEFA1P59665 94 aa10.69□□□□□ -0.7
ACTB-202ENST00000414620 DEFA3P59666 94 aa10.69□□□□□ -0.7
ACTB-202ENST00000414620 C8orf49Q96NF6 230 aa10.69□□□□□ -0.7
ACTB-202ENST00000414620 WFDC1Q9HC57 220 aa10.69□□□□□ -0.7
ACTB-202ENST00000414620 NAGKQ9UJ70 344 aa10.69□□□□□ -0.7
ACTB-202ENST00000414620 ICOSQ9Y6W8 199 aa10.69□□□□□ -0.7
ACTB-202ENST00000414620 RBAKDNA6NC62 111 aa10.68□□□□□ -0.7
ACTB-202ENST00000414620 ZNF266Q14584 549 aa10.68□□□□□ -0.7
ACTB-202ENST00000414620 LYPD1Q8N2G4 141 aa10.68□□□□□ -0.7
ACTB-202ENST00000414620 MDFICQ9P1T7 246 aa10.68□□□□□ -0.7
ACTB-202ENST00000414620 TRBV7-9A0A0J9YWB2 115 aa10.67□□□□□ -0.7
ACTB-202ENST00000414620 A0A1W2PPQ1 181 aa10.67□□□□□ -0.7
ACTB-202ENST00000414620 HMGB3O15347 200 aaKnown RBP10.67□□□□□ -0.7
ACTB-202ENST00000414620 NXPH4O95158 308 aa10.67□□□□□ -0.7
ACTB-202ENST00000414620 SFTA3P0C7M3 94 aa10.67□□□□□ -0.7
ACTB-202ENST00000414620 CRYBA4P53673 196 aa10.67□□□□□ -0.7
ACTB-202ENST00000414620 LINC00315P59091 139 aa10.67□□□□□ -0.7
ACTB-202ENST00000414620 RAB2AP61019 212 aa10.67□□□□□ -0.7
ACTB-202ENST00000414620 TMEM183BQ1AE95 376 aa10.67□□□□□ -0.7
ACTB-202ENST00000414620 TMEM183AQ8IXX5 376 aa10.67□□□□□ -0.7
ACTB-202ENST00000414620 PRO0255Q9UI72 69 aa10.67□□□□□ -0.7
ACTB-202ENST00000414620 TRGV4A0A0C4DH28 118 aa10.66□□□□□ -0.7
ACTB-202ENST00000414620 PGPA6NDG6 321 aa10.66□□□□□ -0.7
ACTB-202ENST00000414620 SIVA1O15304 175 aa10.66□□□□□ -0.7
ACTB-202ENST00000414620 FHL2Q14192 279 aa10.66□□□□□ -0.7
ACTB-202ENST00000414620 ACOT6Q3I5F7 207 aaPredicted RBP10.66□□□□□ -0.7
ACTB-202ENST00000414620 Q6AWC8 147 aa10.66□□□□□ -0.7
ACTB-202ENST00000414620 CMTM2Q8TAZ6 248 aa10.66□□□□□ -0.7
ACTB-202ENST00000414620 OTORQ9NRC9 128 aa10.66□□□□□ -0.7
ACTB-202ENST00000414620 A0A1W2PPV4 95 aa10.65□□□□□ -0.7
ACTB-202ENST00000414620 F6UZH7 168 aa10.65□□□□□ -0.7
ACTB-202ENST00000414620 KRTAP10-2P60368 255 aa10.65□□□□□ -0.7
ACTB-202ENST00000414620 GNG5P63218 68 aa10.65□□□□□ -0.7
ACTB-202ENST00000414620 FAM159AQ6UWV7 190 aa10.65□□□□□ -0.7
ACTB-202ENST00000414620 GOLT1AQ6ZVE7 132 aa10.65□□□□□ -0.7
ACTB-202ENST00000414620 ZNF479Q96JC4 524 aa10.65□□□□□ -0.7
ACTB-202ENST00000414620 HHLA3Q9XRX5 114 aa10.65□□□□□ -0.7
ACTB-202ENST00000414620 TRGV11A0A075B6L2 103 aa10.64□□□□□ -0.71
ACTB-202ENST00000414620 MAPKAPK5-AS1Q8N8E1 139 aa10.64□□□□□ -0.71
ACTB-202ENST00000414620 ALG5Q9Y673 324 aa10.64□□□□□ -0.71
ACTB-202ENST00000414620 TRAV8-1A0A0A6YYK1 113 aa10.63□□□□□ -0.71
ACTB-202ENST00000414620 CDK2AP2O75956 126 aa10.63□□□□□ -0.71
ACTB-202ENST00000414620 SLAQ13239 276 aa10.63□□□□□ -0.71
ACTB-202ENST00000414620 MRPL23Q16540 153 aaKnown RBP10.63□□□□□ -0.71
ACTB-202ENST00000414620 FAM74A1Q5RGS3 127 aa10.63□□□□□ -0.71
ACTB-202ENST00000414620 LYPD5Q6UWN5 251 aa10.63□□□□□ -0.71
ACTB-202ENST00000414620 PQLC2Q6ZP29 291 aa10.63□□□□□ -0.71
ACTB-202ENST00000414620 SGK494Q96LW2 274 aa10.63□□□□□ -0.71
ACTB-202ENST00000414620 LENEPQ9Y5L5 61 aa10.63□□□□□ -0.71
ACTB-202ENST00000414620 TNFRSF18Q9Y5U5 241 aa10.63□□□□□ -0.71
ACTB-202ENST00000414620 HSPG2P98160 4391 aa10.63□□□□□ -0.71
ACTB-202ENST00000414620 LRP1BQ9NZR2 4599 aa10.63□□□□□ -0.71
ACTB-202ENST00000414620 ABCA13Q86UQ4 5058 aa10.62□□□□□ -0.71
ACTB-202ENST00000414620 GNRH2O43555 120 aa10.62□□□□□ -0.71
ACTB-202ENST00000414620 Q6ZRN7 208 aaPredicted RBP10.62□□□□□ -0.71
ACTB-202ENST00000414620 HSD17B11Q8NBQ5 300 aa10.62□□□□□ -0.71
ACTB-202ENST00000414620 OR10G4Q8NGN3 311 aa10.62□□□□□ -0.71
ACTB-202ENST00000414620 OR10G9Q8NGN4 311 aa10.62□□□□□ -0.71
ACTB-202ENST00000414620 OR10G7Q8NGN6 311 aa10.62□□□□□ -0.71
ACTB-202ENST00000414620 TVP23CQ96ET8 276 aa10.62□□□□□ -0.71
ACTB-202ENST00000414620 K7EQD1 137 aa10.61□□□□□ -0.71
ACTB-202ENST00000414620 TYMSP04818 313 aa10.61□□□□□ -0.71
ACTB-202ENST00000414620 ARL14EPLP0DKL9 152 aa10.61□□□□□ -0.71
ACTB-202ENST00000414620 GYPEP15421 78 aa10.61□□□□□ -0.71
ACTB-202ENST00000414620 BTF3P20290 206 aaKnown RBP10.61□□□□□ -0.71
ACTB-202ENST00000414620 SRIP30626 198 aa10.61□□□□□ -0.71
ACTB-202ENST00000414620 FUSP35637 526 aaKnown RBP eCLIP10.61□□□□□ -0.716e-7■■■□□ 16.1
ACTB-202ENST00000414620 CDC34P49427 236 aaPredicted RBP10.61□□□□□ -0.71
ACTB-202ENST00000414620 NEGR1Q7Z3B1 354 aa10.61□□□□□ -0.71
ACTB-202ENST00000414620 PCNPQ8WW12 178 aaKnown RBP10.61□□□□□ -0.71
ACTB-202ENST00000414620 TMED6Q8WW62 240 aa10.61□□□□□ -0.71
ACTB-202ENST00000414620 SPXQ9BT56 116 aa10.61□□□□□ -0.71
ACTB-202ENST00000414620 TREM1Q9NP99 234 aa10.61□□□□□ -0.71
ACTB-202ENST00000414620 TRAV21A0A0B4J279 112 aa10.6□□□□□ -0.71
ACTB-202ENST00000414620 IGHV3-16A0A0C4DH30 117 aa10.6□□□□□ -0.71
ACTB-202ENST00000414620 WFDC10BQ8IUB3 73 aa10.6□□□□□ -0.71
ACTB-202ENST00000414620 RASL10AQ92737 203 aa10.6□□□□□ -0.71
ACTB-202ENST00000414620 TRAV4A0A0B4J268 109 aa10.59□□□□□ -0.71
ACTB-202ENST00000414620 LOC100131303A0A0U1RQF7 123 aa10.59□□□□□ -0.71
ACTB-202ENST00000414620 TDRG1Q3Y452 100 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms