RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 UBE2CO00762 179 aa4.97□□□□□ -1.61
LINC00343-201ENST00000414368 CXorf1O96002 111 aa4.97□□□□□ -1.61
LINC00343-201ENST00000414368 CA1P00915 261 aaPredicted RBP4.97□□□□□ -1.61
LINC00343-201ENST00000414368 IGKV2D-40P01614 121 aaPredicted RBP4.97□□□□□ -1.61
LINC00343-201ENST00000414368 ERCC8Q13216 396 aa4.97□□□□□ -1.61
LINC00343-201ENST00000414368 FAM74A1Q5RGS3 127 aa4.97□□□□□ -1.61
LINC00343-201ENST00000414368 AMTNQ6UX39 209 aa4.97□□□□□ -1.61
LINC00343-201ENST00000414368 KIR2DL5AQ8N109 375 aa4.97□□□□□ -1.61
LINC00343-201ENST00000414368 KIR2DL5BQ8NHK3 375 aa4.97□□□□□ -1.61
LINC00343-201ENST00000414368 SUN5Q8TC36 379 aa4.97□□□□□ -1.61
LINC00343-201ENST00000414368 SFT2D1Q8WV19 159 aa4.97□□□□□ -1.61
LINC00343-201ENST00000414368 RNF183Q96D59 192 aa4.97□□□□□ -1.61
LINC00343-201ENST00000414368 OVOL2Q9BRP0 275 aa4.97□□□□□ -1.61
LINC00343-201ENST00000414368 MAP1LC3BQ9GZQ8 125 aa4.97□□□□□ -1.61
LINC00343-201ENST00000414368 U3KQK5 164 aa4.97□□□□□ -1.61
LINC00343-201ENST00000414368 GAGE12JA6NER3 117 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 A8MTW9 85 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 DUSP14O95147 198 aaKnown RBP4.96□□□□□ -1.62
LINC00343-201ENST00000414368 CT45A10P0DMU9 189 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 UBE2G2P60604 165 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 GNG5P63218 68 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 SPINK13Q1W4C9 94 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 ALKAL2Q6UX46 152 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 CSNK1G2-AS1Q8NCQ2 148 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 OR10J6PQ8NGY7 276 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 MBD3L1Q8WWY6 194 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 RCHY1Q96PM5 261 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 VGLL1Q99990 258 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 AGPAT4-IT1Q9H0P7 198 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 OTORQ9NRC9 128 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 TMEM167BQ9NRX6 74 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 RPH3ALQ9UNE2 315 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 PRELID1Q9Y255 219 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 YTHDF2Q9Y5A9 579 aaKnown RBP4.96□□□□□ -1.62
LINC00343-201ENST00000414368 TENM2Q9NT68 2774 aa4.96□□□□□ -1.62
LINC00343-201ENST00000414368 TRAV12-2A0A075B6T6 113 aa4.95□□□□□ -1.62
LINC00343-201ENST00000414368 GGTLC3B5MD39 225 aa4.95□□□□□ -1.62
LINC00343-201ENST00000414368 SLC25A5P05141 298 aaKnown RBP4.95□□□□□ -1.62
LINC00343-201ENST00000414368 SULT1A2P50226 295 aa4.95□□□□□ -1.62
LINC00343-201ENST00000414368 NUTF2P61970 127 aaKnown RBP4.95□□□□□ -1.62
LINC00343-201ENST00000414368 CCL20P78556 96 aa4.95□□□□□ -1.62
LINC00343-201ENST00000414368 EIF5AL1Q6IS14 154 aaKnown RBP4.95□□□□□ -1.62
LINC00343-201ENST00000414368 MORN3Q6PF18 240 aaPredicted RBP4.95□□□□□ -1.62
LINC00343-201ENST00000414368 DPPA3Q6W0C5 159 aa4.95□□□□□ -1.62
LINC00343-201ENST00000414368 LYPD1Q8N2G4 141 aa4.95□□□□□ -1.62
LINC00343-201ENST00000414368 OR11H2Q8NH07 326 aa4.95□□□□□ -1.62
LINC00343-201ENST00000414368 MRPL53Q96EL3 112 aaKnown RBP4.95□□□□□ -1.62
LINC00343-201ENST00000414368 SGK494Q96LW2 274 aa4.95□□□□□ -1.62
LINC00343-201ENST00000414368 IGHV3OR16-12A0A075B7B8 117 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 TRAV8-1A0A0A6YYK1 113 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 IGLV5-39A0A0G2JS06 123 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 FAM74A7A6NL05 159 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 ZNF705EA8MWA4 302 aaPredicted RBP4.94□□□□□ -1.62
LINC00343-201ENST00000414368 DEFB4AO15263 64 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 CRXO43186 299 aaPredicted RBP4.94□□□□□ -1.62
LINC00343-201ENST00000414368 PAGE4O60829 102 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 PRM2P04554 102 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 RBMY1A1P0DJD3 496 aaKnown RBP4.94□□□□□ -1.62
LINC00343-201ENST00000414368 RBMY1CP0DJD4 496 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 CSN1S1P47710 185 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 RAB5CP51148 216 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 RBMY1FQ15415 496 aaKnown RBP4.94□□□□□ -1.62
LINC00343-201ENST00000414368 CST9LP1Q5W188 147 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 C9orf47Q6ZRZ4 202 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 GOLT1AQ6ZVE7 132 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 C1orf158Q8N1D5 194 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 Q8TAT8 98 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 CMTM2Q8TAZ6 248 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 RXFP4Q8TDU9 374 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 RARRES2Q99969 163 aa4.94□□□□□ -1.62
LINC00343-201ENST00000414368 TRAV34A0A0B4J273 112 aa4.93□□□□□ -1.62
LINC00343-201ENST00000414368 A0A1W2PRE2 83 aa4.93□□□□□ -1.62
LINC00343-201ENST00000414368 IFNA7P01567 189 aa4.93□□□□□ -1.62
LINC00343-201ENST00000414368 TCRAP04437 139 aa4.93□□□□□ -1.62
LINC00343-201ENST00000414368 CDKN1BP46527 198 aa4.93□□□□□ -1.62
LINC00343-201ENST00000414368 TMEM78Q5T7P6 136 aa4.93□□□□□ -1.62
LINC00343-201ENST00000414368 Q6ZQT7 251 aa4.93□□□□□ -1.62
LINC00343-201ENST00000414368 C5orf17Q8NAS9 161 aa4.93□□□□□ -1.62
LINC00343-201ENST00000414368 TMEM18Q96B42 140 aa4.93□□□□□ -1.62
LINC00343-201ENST00000414368 IGF2BP2-AS1Q96M15 143 aa4.93□□□□□ -1.62
LINC00343-201ENST00000414368 LINC00477Q96M19 166 aa4.93□□□□□ -1.62
LINC00343-201ENST00000414368 LINC00479Q96M42 142 aa4.93□□□□□ -1.62
LINC00343-201ENST00000414368 C1QTNF4Q9BXJ3 329 aa4.93□□□□□ -1.62
LINC00343-201ENST00000414368 ZNF492Q9P255 531 aa4.93□□□□□ -1.62
LINC00343-201ENST00000414368 EPDR1Q9UM22 224 aa4.93□□□□□ -1.62
LINC00343-201ENST00000414368 TP53TG1Q9Y2A0 90 aa4.93□□□□□ -1.62
LINC00343-201ENST00000414368 TRAV1-1A0A0B4J248 108 aa4.92□□□□□ -1.62
LINC00343-201ENST00000414368 TRAV12-3A0A0B4J271 114 aa4.92□□□□□ -1.62
LINC00343-201ENST00000414368 A0A0J9YWU9 116 aa4.92□□□□□ -1.62
LINC00343-201ENST00000414368 RBAKDNA6NC62 111 aa4.92□□□□□ -1.62
LINC00343-201ENST00000414368 CBY3A6NI87 242 aa4.92□□□□□ -1.62
LINC00343-201ENST00000414368 ZNF705GA8MUZ8 300 aaPredicted RBP4.92□□□□□ -1.62
LINC00343-201ENST00000414368 HTN1P15515 57 aa4.92□□□□□ -1.62
LINC00343-201ENST00000414368 TSPOP30536 169 aa4.92□□□□□ -1.62
LINC00343-201ENST00000414368 RNASE4P34096 147 aaKnown RBP4.92□□□□□ -1.62
LINC00343-201ENST00000414368 LEPP41159 167 aa4.92□□□□□ -1.62
LINC00343-201ENST00000414368 ATP5G3P48201 142 aa4.92□□□□□ -1.62
LINC00343-201ENST00000414368 ZNF138P52744 262 aa4.92□□□□□ -1.62
LINC00343-201ENST00000414368 BTN1A1Q13410 526 aa4.92□□□□□ -1.62
LINC00343-201ENST00000414368 PRR9Q5T870 116 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms