RNA–Protein interactions for RNA: ENST00000414069.2

SPRN-201, Transcript of shadow of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRN, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRN-201ENST00000414069 C1RLQ9NZP8 487 aa16.2■□□□□ 0.18
SPRN-201ENST00000414069 SORL1Q92673 2214 aa16.2■□□□□ 0.18
SPRN-201ENST00000414069 A1L4Q6 167 aa16.19■□□□□ 0.18
SPRN-201ENST00000414069 C19orf71A6NCJ1 209 aa16.19■□□□□ 0.18
SPRN-201ENST00000414069 CRIP1P50238 77 aa16.19■□□□□ 0.18
SPRN-201ENST00000414069 RNF182Q8N6D2 247 aa16.19■□□□□ 0.18
SPRN-201ENST00000414069 OR5A1Q8NGJ0 315 aa16.19■□□□□ 0.18
SPRN-201ENST00000414069 SONP18583 2426 aaKnown RBP16.19■□□□□ 0.18
SPRN-201ENST00000414069 CTSGP08311 255 aa16.19■□□□□ 0.18
SPRN-201ENST00000414069 EFNA4P52798 201 aa16.19■□□□□ 0.18
SPRN-201ENST00000414069 AMTNQ6UX39 209 aa16.19■□□□□ 0.18
SPRN-201ENST00000414069 FAM106CPP0CH98 169 aa16.19■□□□□ 0.18
SPRN-201ENST00000414069 PET117Q6UWS5 81 aa16.19■□□□□ 0.18
SPRN-201ENST00000414069 ANKRD17O75179 2603 aaKnown RBP16.18■□□□□ 0.18
SPRN-201ENST00000414069 MYO9AB2RTY4 2548 aa16.18■□□□□ 0.18
SPRN-201ENST00000414069 PPIFP30405 207 aaKnown RBP16.18■□□□□ 0.18
SPRN-201ENST00000414069 LMO4P61968 165 aa16.18■□□□□ 0.18
SPRN-201ENST00000414069 AAMDCQ9H7C9 122 aa16.18■□□□□ 0.18
SPRN-201ENST00000414069 LOC389332A0A1B0GUA5 103 aa16.17■□□□□ 0.18
SPRN-201ENST00000414069 PRSS22Q9GZN4 317 aa16.17■□□□□ 0.18
SPRN-201ENST00000414069 SMIM17P0DL12 118 aa16.17■□□□□ 0.18
SPRN-201ENST00000414069 RBPMS2Q6ZRY4 209 aaKnown RBP16.17■□□□□ 0.18
SPRN-201ENST00000414069 C18orf15Q96N68 181 aa16.17■□□□□ 0.18
SPRN-201ENST00000414069 CCDC168Q8NDH2 2452 aa16.17■□□□□ 0.18
SPRN-201ENST00000414069 NPIPB5A8MRT5 1133 aa16.17■□□□□ 0.18
SPRN-201ENST00000414069 IGHV4-39P01824 125 aa16.17■□□□□ 0.18
SPRN-201ENST00000414069 LCNL1Q6ZST4 164 aa16.17■□□□□ 0.18
SPRN-201ENST00000414069 SPAG8Q99932 426 aaPredicted RBP16.17■□□□□ 0.18
SPRN-201ENST00000414069 VGLL1Q99990 258 aa16.17■□□□□ 0.18
SPRN-201ENST00000414069 TRAV40A0A0B4J280 105 aa16.16■□□□□ 0.18
SPRN-201ENST00000414069 ERCC8Q13216 396 aa16.16■□□□□ 0.18
SPRN-201ENST00000414069 IGKV3-7A0A075B6H7 116 aa16.16■□□□□ 0.18
SPRN-201ENST00000414069 APOHP02749 345 aaPredicted RBP16.16■□□□□ 0.18
SPRN-201ENST00000414069 TMEM14CQ9P0S9 112 aa16.16■□□□□ 0.18
SPRN-201ENST00000414069 SCGB1A1P11684 91 aa16.15■□□□□ 0.18
SPRN-201ENST00000414069 FAM106AQ4KMX7 169 aa16.15■□□□□ 0.18
SPRN-201ENST00000414069 NAV2Q8IVL1 2488 aa16.15■□□□□ 0.18
SPRN-201ENST00000414069 A0A1B0GXF2 115 aa16.15■□□□□ 0.18
SPRN-201ENST00000414069 WI2-2373I1.2A0A1W2PRP0 233 aa16.15■□□□□ 0.18
SPRN-201ENST00000414069 J3KRW8 73 aa16.15■□□□□ 0.18
SPRN-201ENST00000414069 WIPF2Q8TF74 440 aaPredicted RBP16.15■□□□□ 0.18
SPRN-201ENST00000414069 H3BMG7 143 aa16.14■□□□□ 0.18
SPRN-201ENST00000414069 TTC9CQ8N5M4 171 aa16.14■□□□□ 0.18
SPRN-201ENST00000414069 TMEM213A2RRL7 107 aa16.14■□□□□ 0.17
SPRN-201ENST00000414069 MRPS12O15235 138 aaKnown RBP16.14■□□□□ 0.17
SPRN-201ENST00000414069 FGF6P10767 208 aa16.14■□□□□ 0.17
SPRN-201ENST00000414069 Q8N6K4 173 aa16.14■□□□□ 0.17
SPRN-201ENST00000414069 USP24Q9UPU5 2620 aa16.14■□□□□ 0.17
SPRN-201ENST00000414069 CT45A10P0DMU9 189 aa16.14■□□□□ 0.17
SPRN-201ENST00000414069 AJUBAQ96IF1 538 aa16.14■□□□□ 0.17
SPRN-201ENST00000414069 IGHV4-61A0A0C4DH41 118 aa16.13■□□□□ 0.17
SPRN-201ENST00000414069 FXYD2P54710 66 aa16.13■□□□□ 0.17
SPRN-201ENST00000414069 LINC01545Q5VT33 79 aa16.13■□□□□ 0.17
SPRN-201ENST00000414069 CHCHD1Q96BP2 118 aaKnown RBP16.13■□□□□ 0.17
SPRN-201ENST00000414069 CENPVL3A0A0U1RRI6 287 aa16.13■□□□□ 0.17
SPRN-201ENST00000414069 PRAC2D3DTV9 90 aa16.13■□□□□ 0.17
SPRN-201ENST00000414069 CACNG7P62955 275 aa16.13■□□□□ 0.17
SPRN-201ENST00000414069 SHISA2Q6UWI4 295 aa16.13■□□□□ 0.17
SPRN-201ENST00000414069 FA2HQ7L5A8 372 aa16.13■□□□□ 0.17
SPRN-201ENST00000414069 SMIM13P0DJ93 91 aa16.12■□□□□ 0.17
SPRN-201ENST00000414069 CSN1S1P47710 185 aa16.12■□□□□ 0.17
SPRN-201ENST00000414069 C20orf78Q9BR46 151 aa16.12■□□□□ 0.17
SPRN-201ENST00000414069 NHP2Q9NX24 153 aaKnown RBP16.12■□□□□ 0.17
SPRN-201ENST00000414069 SMAD5-AS1Q9Y6J3 95 aa16.12■□□□□ 0.17
SPRN-201ENST00000414069 NPFFO15130 113 aa16.12■□□□□ 0.17
SPRN-201ENST00000414069 UBE2E1P51965 193 aa16.12■□□□□ 0.17
SPRN-201ENST00000414069 MAPK1IP1LQ8NDC0 245 aa16.12■□□□□ 0.17
SPRN-201ENST00000414069 PRSS3P2Q8NHM4 247 aa16.12■□□□□ 0.17
SPRN-201ENST00000414069 J3QR89 54 aa16.12■□□□□ 0.17
SPRN-201ENST00000414069 FBN2P35556 2912 aa16.11■□□□□ 0.17
SPRN-201ENST00000414069 LOXL1Q08397 574 aaPredicted RBP16.11■□□□□ 0.17
SPRN-201ENST00000414069 MRAP2Q96G30 205 aa16.11■□□□□ 0.17
SPRN-201ENST00000414069 PRORYQ9H606 182 aa16.11■□□□□ 0.17
SPRN-201ENST00000414069 AP5S1Q9NUS5 200 aa16.11■□□□□ 0.17
SPRN-201ENST00000414069 IGHV3-11P01762 117 aa16.11■□□□□ 0.17
SPRN-201ENST00000414069 ZNF80P51504 273 aaPredicted RBP16.11■□□□□ 0.17
SPRN-201ENST00000414069 MINOS1Q5TGZ0 78 aa16.11■□□□□ 0.17
SPRN-201ENST00000414069 MINOS1-NBL1R4GNA1 71 aa16.11■□□□□ 0.17
SPRN-201ENST00000414069 SMKR1H3BMG3 65 aa16.1■□□□□ 0.17
SPRN-201ENST00000414069 SMAD7O15105 426 aaKnown RBP16.1■□□□□ 0.17
SPRN-201ENST00000414069 PRB1P04280 392 aa16.1■□□□□ 0.17
SPRN-201ENST00000414069 IGHV4-38-2P0DP08 117 aa16.1■□□□□ 0.17
SPRN-201ENST00000414069 DEFB1P60022 68 aa16.1■□□□□ 0.17
SPRN-201ENST00000414069 ANXA2RQ3ZCQ2 193 aa16.1■□□□□ 0.17
SPRN-201ENST00000414069 FAM162BQ5T6X4 162 aa16.1■□□□□ 0.17
SPRN-201ENST00000414069 ZNF747Q9BV97 191 aa16.1■□□□□ 0.17
SPRN-201ENST00000414069 SPANXB1Q9NS25 103 aaPredicted RBP16.1■□□□□ 0.17
SPRN-201ENST00000414069 MXRA5Q9NR99 2828 aa16.1■□□□□ 0.17
SPRN-201ENST00000414069 A0A1B0GUT8 65 aa16.1■□□□□ 0.17
SPRN-201ENST00000414069 RASL11AQ6T310 242 aa16.1■□□□□ 0.17
SPRN-201ENST00000414069 LYZL1Q6UWQ5 148 aa16.1■□□□□ 0.17
SPRN-201ENST00000414069 ZNF492Q9P255 531 aa16.1■□□□□ 0.17
SPRN-201ENST00000414069 SH2D1AO60880 128 aa16.09■□□□□ 0.17
SPRN-201ENST00000414069 Q6ZQT7 251 aa16.09■□□□□ 0.17
SPRN-201ENST00000414069 RNF183Q96D59 192 aa16.09■□□□□ 0.17
SPRN-201ENST00000414069 ORM1P02763 201 aa16.08■□□□□ 0.17
SPRN-201ENST00000414069 NOTCH3Q9UM47 2321 aa16.08■□□□□ 0.16
SPRN-201ENST00000414069 RPL7P18124 248 aaKnown RBP16.08■□□□□ 0.16
SPRN-201ENST00000414069 C1orf122Q6ZSJ8 110 aa16.08■□□□□ 0.16
SPRN-201ENST00000414069 ATP5L2Q7Z4Y8 100 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms