RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 ERCC8Q13216 396 aa6.93□□□□□ -1.3
HCG27-202ENST00000414008 RBMY1FQ15415 496 aaKnown RBP6.93□□□□□ -1.3
HCG27-202ENST00000414008 LGALSLQ3ZCW2 172 aaPredicted RBP6.93□□□□□ -1.3
HCG27-202ENST00000414008 FAM74A1Q5RGS3 127 aa6.93□□□□□ -1.3
HCG27-202ENST00000414008 SUMO4Q6EEV6 95 aa6.93□□□□□ -1.3
HCG27-202ENST00000414008 BAP18Q8IXM2 172 aa6.93□□□□□ -1.3
HCG27-202ENST00000414008 RXFP4Q8TDU9 374 aa6.93□□□□□ -1.3
HCG27-202ENST00000414008 ODF3Q96PU9 254 aa6.93□□□□□ -1.3
HCG27-202ENST00000414008 TMEM208Q9BTX3 173 aa6.93□□□□□ -1.3
HCG27-202ENST00000414008 OTORQ9NRC9 128 aa6.93□□□□□ -1.3
HCG27-202ENST00000414008 TMEM167BQ9NRX6 74 aa6.93□□□□□ -1.3
HCG27-202ENST00000414008 IGKV2-40A0A087WW87 121 aaPredicted RBP6.92□□□□□ -1.3
HCG27-202ENST00000414008 CTXND1A0A1B0GTU2 59 aa6.92□□□□□ -1.3
HCG27-202ENST00000414008 IGKV2D-40P01614 121 aaPredicted RBP6.92□□□□□ -1.3
HCG27-202ENST00000414008 TPT1P13693 172 aaKnown RBP6.92□□□□□ -1.3
HCG27-202ENST00000414008 LEPP41159 167 aa6.92□□□□□ -1.3
HCG27-202ENST00000414008 SUMO2P61956 95 aaKnown RBP6.92□□□□□ -1.3
HCG27-202ENST00000414008 ZNF726P1Q15940 193 aa6.92□□□□□ -1.3
HCG27-202ENST00000414008 ZFAND6Q6FIF0 208 aa6.92□□□□□ -1.3
HCG27-202ENST00000414008 C9orf47Q6ZRZ4 202 aa6.92□□□□□ -1.3
HCG27-202ENST00000414008 SSX7Q7RTT5 188 aa6.92□□□□□ -1.3
HCG27-202ENST00000414008 CMTM2Q8TAZ6 248 aa6.92□□□□□ -1.3
HCG27-202ENST00000414008 SUN5Q8TC36 379 aa6.92□□□□□ -1.3
HCG27-202ENST00000414008 AGPAT4-IT1Q9H0P7 198 aa6.92□□□□□ -1.3
HCG27-202ENST00000414008 RBAKDNA6NC62 111 aa6.91□□□□□ -1.3
HCG27-202ENST00000414008 UMAD1C9J7I0 102 aa6.91□□□□□ -1.3
HCG27-202ENST00000414008 HBE1P02100 147 aa6.91□□□□□ -1.3
HCG27-202ENST00000414008 RRN3P1Q2M238 152 aa6.91□□□□□ -1.3
HCG27-202ENST00000414008 CASC10Q5T4H9 136 aa6.91□□□□□ -1.3
HCG27-202ENST00000414008 TMEM78Q5T7P6 136 aa6.91□□□□□ -1.3
HCG27-202ENST00000414008 IQCF2Q8IXL9 164 aa6.91□□□□□ -1.3
HCG27-202ENST00000414008 ARL6IP6Q8N6S5 226 aa6.91□□□□□ -1.3
HCG27-202ENST00000414008 STOML3Q8TAV4 291 aa6.91□□□□□ -1.3
HCG27-202ENST00000414008 C11orf45Q8TAV5 145 aa6.91□□□□□ -1.3
HCG27-202ENST00000414008 LINC01587Q99440 93 aa6.91□□□□□ -1.3
HCG27-202ENST00000414008 VGLL1Q99990 258 aa6.91□□□□□ -1.3
HCG27-202ENST00000414008 TMEM189A5PLL7 270 aa6.9□□□□□ -1.3
HCG27-202ENST00000414008 PGPEP1LA6NFU8 196 aa6.9□□□□□ -1.3
HCG27-202ENST00000414008 SLC25A5P05141 298 aaKnown RBP6.9□□□□□ -1.3
HCG27-202ENST00000414008 ZNF138P52744 262 aa6.9□□□□□ -1.3
HCG27-202ENST00000414008 FGF8P55075 233 aaPredicted RBP6.9□□□□□ -1.3
HCG27-202ENST00000414008 CD300CQ08708 224 aa6.9□□□□□ -1.3
HCG27-202ENST00000414008 ZFP69Q49AA0 526 aa6.9□□□□□ -1.3
HCG27-202ENST00000414008 GFI1BQ5VTD9 330 aa6.9□□□□□ -1.3
HCG27-202ENST00000414008 EIF5AL1Q6IS14 154 aaKnown RBP6.9□□□□□ -1.3
HCG27-202ENST00000414008 TMEM256Q8N2U0 113 aa6.9□□□□□ -1.3
HCG27-202ENST00000414008 TMED6Q8WW62 240 aa6.9□□□□□ -1.3
HCG27-202ENST00000414008 FAM19A4Q96LR4 140 aa6.9□□□□□ -1.3
HCG27-202ENST00000414008 C20orf144Q9BQM9 153 aa6.9□□□□□ -1.3
HCG27-202ENST00000414008 ZNF492Q9P255 531 aa6.9□□□□□ -1.3
HCG27-202ENST00000414008 MAP1LC3B2A6NCE7 125 aa6.89□□□□□ -1.31
HCG27-202ENST00000414008 CXorf65A6NEN9 183 aa6.89□□□□□ -1.31
HCG27-202ENST00000414008 ZNF705GA8MUZ8 300 aaPredicted RBP6.89□□□□□ -1.31
HCG27-202ENST00000414008 NMBP08949 121 aa6.89□□□□□ -1.31
HCG27-202ENST00000414008 CRISP2P16562 243 aa6.89□□□□□ -1.31
HCG27-202ENST00000414008 FHITP49789 147 aa6.89□□□□□ -1.31
HCG27-202ENST00000414008 EMP1P54849 157 aa6.89□□□□□ -1.31
HCG27-202ENST00000414008 TAS2R60P59551 318 aa6.89□□□□□ -1.31
HCG27-202ENST00000414008 NANOS2P60321 138 aaKnown RBP6.89□□□□□ -1.31
HCG27-202ENST00000414008 DPPA3Q6W0C5 159 aa6.89□□□□□ -1.31
HCG27-202ENST00000414008 GOLT1AQ6ZVE7 132 aa6.89□□□□□ -1.31
HCG27-202ENST00000414008 FAM213BQ8TBF2 198 aa6.89□□□□□ -1.31
HCG27-202ENST00000414008 MAP1LC3BQ9GZQ8 125 aa6.89□□□□□ -1.31
HCG27-202ENST00000414008 RPH3ALQ9UNE2 315 aa6.89□□□□□ -1.31
HCG27-202ENST00000414008 TRAV12-3A0A0B4J271 114 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 TRBV7-9A0A0J9YWB2 115 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 SERTM2A0A1B0GWG4 89 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 A0A1W2PRE2 83 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 C7orf71A4D174 169 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 KLLNB2CW77 178 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 H7BYZ3 331 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 PRM2P04554 102 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 GPX1P07203 203 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 NPSP0C0P6 89 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 HTN1P15515 57 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 RNASE4P34096 147 aaKnown RBP6.88□□□□□ -1.31
HCG27-202ENST00000414008 GNG5P63218 68 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 SLC51BQ86UW2 128 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 C9orf62Q8N4C0 152 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 ZFAND2AQ8N6M9 145 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 C5orf17Q8NAS9 161 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 Q8TAT8 98 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 SFT2D1Q8WV19 159 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 MBD3L1Q8WWY6 194 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 NIPSNAP3BQ9BS92 247 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 EPDR1Q9UM22 224 aa6.88□□□□□ -1.31
HCG27-202ENST00000414008 GGTLC3B5MD39 225 aa6.87□□□□□ -1.31
HCG27-202ENST00000414008 K7EQM0 130 aa6.87□□□□□ -1.31
HCG27-202ENST00000414008 TCRAP04437 139 aa6.87□□□□□ -1.31
HCG27-202ENST00000414008 SPART-AS1P0CW21 52 aa6.87□□□□□ -1.31
HCG27-202ENST00000414008 AZU1P20160 251 aa6.87□□□□□ -1.31
HCG27-202ENST00000414008 RAB5CP51148 216 aa6.87□□□□□ -1.31
HCG27-202ENST00000414008 FAM3BP58499 235 aaPredicted RBP6.87□□□□□ -1.31
HCG27-202ENST00000414008 UBE2G2P60604 165 aa6.87□□□□□ -1.31
HCG27-202ENST00000414008 BTN1A1Q13410 526 aa6.87□□□□□ -1.31
HCG27-202ENST00000414008 CEMP1Q6PRD7 247 aaPredicted RBP6.87□□□□□ -1.31
HCG27-202ENST00000414008 PHLDA1Q8WV24 401 aaPredicted RBP6.87□□□□□ -1.31
HCG27-202ENST00000414008 PYGO2Q9BRQ0 406 aa6.87□□□□□ -1.31
HCG27-202ENST00000414008 NKX6-2Q9C056 277 aaPredicted RBP6.87□□□□□ -1.31
HCG27-202ENST00000414008 CELA1Q9UNI1 258 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms