RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 TMEM78Q5T7P6 136 aa11.5□□□□□ -0.57
TTC39A-208ENST00000413473 NPFFR1Q9GZQ6 430 aa11.5□□□□□ -0.57
TTC39A-208ENST00000413473 PEF1Q9UBV8 284 aaKnown RBP11.5□□□□□ -0.57
TTC39A-208ENST00000413473 FCER1GP30273 86 aa11.5□□□□□ -0.57
TTC39A-208ENST00000413473 C8orf86Q6ZUL3 223 aa11.5□□□□□ -0.57
TTC39A-208ENST00000413473 NXT2Q9NPJ8 142 aaKnown RBP11.5□□□□□ -0.57
TTC39A-208ENST00000413473 NPFFO15130 113 aa11.49□□□□□ -0.57
TTC39A-208ENST00000413473 Q6ZQT7 251 aa11.49□□□□□ -0.57
TTC39A-208ENST00000413473 TRBV7-1A0A0A6YYK4 115 aa11.49□□□□□ -0.57
TTC39A-208ENST00000413473 LINC01546A6NGU7 62 aa11.49□□□□□ -0.57
TTC39A-208ENST00000413473 TRGV3P03979 118 aa11.49□□□□□ -0.57
TTC39A-208ENST00000413473 TMEM219Q86XT9 240 aa11.49□□□□□ -0.57
TTC39A-208ENST00000413473 OR9G4Q8NGQ1 327 aa11.49□□□□□ -0.57
TTC39A-208ENST00000413473 LINC00527Q9UJ94 153 aa11.49□□□□□ -0.57
TTC39A-208ENST00000413473 PRSS1P07477 247 aa11.48□□□□□ -0.57
TTC39A-208ENST00000413473 PCP4P48539 62 aa11.48□□□□□ -0.57
TTC39A-208ENST00000413473 ATP5G2Q06055 141 aa11.48□□□□□ -0.57
TTC39A-208ENST00000413473 C21orf62-AS1Q17RA5 79 aa11.48□□□□□ -0.57
TTC39A-208ENST00000413473 C5orf56Q8N8D9 126 aa11.48□□□□□ -0.57
TTC39A-208ENST00000413473 CELSR1Q9NYQ6 3014 aa11.47□□□□□ -0.57
TTC39A-208ENST00000413473 ADAMTSL5Q6ZMM2 481 aa11.47□□□□□ -0.57
TTC39A-208ENST00000413473 TMEM158Q8WZ71 300 aa11.47□□□□□ -0.57
TTC39A-208ENST00000413473 IGHV3OR16-10A0A075B7F0 116 aa11.47□□□□□ -0.57
TTC39A-208ENST00000413473 SIVA1O15304 175 aa11.47□□□□□ -0.57
TTC39A-208ENST00000413473 ODF1Q14990 250 aa11.47□□□□□ -0.57
TTC39A-208ENST00000413473 U3KQE9 123 aa11.47□□□□□ -0.57
TTC39A-208ENST00000413473 IGHV7-4-1A0A0J9YVY3 117 aa11.46□□□□□ -0.57
TTC39A-208ENST00000413473 HSD52Q0P140 79 aa11.46□□□□□ -0.57
TTC39A-208ENST00000413473 Q8N8P6 123 aa11.46□□□□□ -0.57
TTC39A-208ENST00000413473 VPS13CQ709C8 3753 aa11.46□□□□□ -0.58
TTC39A-208ENST00000413473 TRAV26-2A0A0B4J265 109 aa11.46□□□□□ -0.58
TTC39A-208ENST00000413473 A6NDN8 102 aa11.46□□□□□ -0.58
TTC39A-208ENST00000413473 C9orf47Q6ZRZ4 202 aa11.46□□□□□ -0.58
TTC39A-208ENST00000413473 OR2K2Q8NGT1 345 aa11.46□□□□□ -0.58
TTC39A-208ENST00000413473 C16orf92Q96LL3 132 aa11.46□□□□□ -0.58
TTC39A-208ENST00000413473 CST9LQ9H4G1 147 aa11.46□□□□□ -0.58
TTC39A-208ENST00000413473 HHLA3Q9XRX5 114 aa11.46□□□□□ -0.58
TTC39A-208ENST00000413473 IGLV2-18A0A075B6J9 118 aa11.45□□□□□ -0.58
TTC39A-208ENST00000413473 OR4X2Q8NGF9 303 aa11.45□□□□□ -0.58
TTC39A-208ENST00000413473 MRPL53Q96EL3 112 aaKnown RBP11.45□□□□□ -0.58
TTC39A-208ENST00000413473 COL25A1Q9BXS0 654 aaPredicted RBP11.45□□□□□ -0.58
TTC39A-208ENST00000413473 UFC1Q9Y3C8 167 aa11.45□□□□□ -0.58
TTC39A-208ENST00000413473 IGKV2D-26A0A0A0MRZ7 120 aa11.45□□□□□ -0.58
TTC39A-208ENST00000413473 GAGE12BA1L429 117 aa11.45□□□□□ -0.58
TTC39A-208ENST00000413473 H3BRM9 83 aa11.45□□□□□ -0.58
TTC39A-208ENST00000413473 CDKN1BP46527 198 aa11.45□□□□□ -0.58
TTC39A-208ENST00000413473 RNF151Q2KHN1 245 aa11.45□□□□□ -0.58
TTC39A-208ENST00000413473 SMIM15Q7Z3B0 74 aa11.45□□□□□ -0.58
TTC39A-208ENST00000413473 ZMAT4Q9H898 229 aa11.45□□□□□ -0.58
TTC39A-208ENST00000413473 ABCA2Q9BZC7 2435 aa11.45□□□□□ -0.58
TTC39A-208ENST00000413473 MAP1AP78559 2803 aaPredicted RBP11.45□□□□□ -0.58
TTC39A-208ENST00000413473 TRAV41A0A0B4J266 112 aa11.44□□□□□ -0.58
TTC39A-208ENST00000413473 KIR3DS1Q14943 382 aa11.44□□□□□ -0.58
TTC39A-208ENST00000413473 FOXC2Q99958 501 aa11.44□□□□□ -0.58
TTC39A-208ENST00000413473 HIF1ANQ9NWT6 349 aa11.44□□□□□ -0.58
TTC39A-208ENST00000413473 SPG11Q96JI7 2443 aa11.44□□□□□ -0.58
TTC39A-208ENST00000413473 C9orf118A6NHY6 69 aa11.44□□□□□ -0.58
TTC39A-208ENST00000413473 SPANXN1Q5VSR9 72 aa11.44□□□□□ -0.58
TTC39A-208ENST00000413473 AP1S3Q96PC3 154 aa11.44□□□□□ -0.58
TTC39A-208ENST00000413473 NAA38Q9BRA0 125 aaKnown RBP11.44□□□□□ -0.58
TTC39A-208ENST00000413473 TTTY13Q9BZ97 58 aa11.44□□□□□ -0.58
TTC39A-208ENST00000413473 GAGE10A6NGK3 116 aa11.44□□□□□ -0.58
TTC39A-208ENST00000413473 SMIM17P0DL12 118 aa11.44□□□□□ -0.58
TTC39A-208ENST00000413473 LY6DQ14210 128 aa11.44□□□□□ -0.58
TTC39A-208ENST00000413473 NRACQ8N912 160 aa11.44□□□□□ -0.58
TTC39A-208ENST00000413473 J3KRW8 73 aa11.43□□□□□ -0.58
TTC39A-208ENST00000413473 IGKCP01834 107 aa11.43□□□□□ -0.58
TTC39A-208ENST00000413473 IGF1P05019 195 aa11.43□□□□□ -0.58
TTC39A-208ENST00000413473 PRR9Q5T870 116 aa11.43□□□□□ -0.58
TTC39A-208ENST00000413473 PIFOQ8TCI5 191 aa11.43□□□□□ -0.58
TTC39A-208ENST00000413473 H3BUT2 72 aa11.43□□□□□ -0.58
TTC39A-208ENST00000413473 OCIAD2Q56VL3 154 aa11.43□□□□□ -0.58
TTC39A-208ENST00000413473 RAB37Q96AX2 223 aa11.43□□□□□ -0.58
TTC39A-208ENST00000413473 C20orf173Q96LM9 149 aa11.43□□□□□ -0.58
TTC39A-208ENST00000413473 MOB4Q9Y3A3 225 aa11.43□□□□□ -0.58
TTC39A-208ENST00000413473 SELENOKQ9Y6D0 94 aa11.43□□□□□ -0.58
TTC39A-208ENST00000413473 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.42□□□□□ -0.58
TTC39A-208ENST00000413473 H3BVH4 76 aa11.42□□□□□ -0.58
TTC39A-208ENST00000413473 GLMPQ8WWB7 406 aa11.42□□□□□ -0.58
TTC39A-208ENST00000413473 JMJD8Q96S16 334 aa11.42□□□□□ -0.58
TTC39A-208ENST00000413473 LAGE3Q14657 143 aa11.42□□□□□ -0.58
TTC39A-208ENST00000413473 TM4SF20Q53R12 229 aa11.42□□□□□ -0.58
TTC39A-208ENST00000413473 BRD3OSQ6XYD6 125 aa11.42□□□□□ -0.58
TTC39A-208ENST00000413473 GTSCR1Q86UQ5 136 aa11.42□□□□□ -0.58
TTC39A-208ENST00000413473 TRBV12-3P01733 135 aa11.41□□□□□ -0.58
TTC39A-208ENST00000413473 ARL3P36405 182 aa11.41□□□□□ -0.58
TTC39A-208ENST00000413473 UNQ9165/PRO28630Q6UXU0 137 aa11.41□□□□□ -0.58
TTC39A-208ENST00000413473 IGHV4-4A0A075B6R2 117 aa11.41□□□□□ -0.58
TTC39A-208ENST00000413473 TMEM8BA6NDV4 472 aa11.41□□□□□ -0.58
TTC39A-208ENST00000413473 C19orf84I3L1E1 186 aa11.41□□□□□ -0.58
TTC39A-208ENST00000413473 C19orf54Q5BKX5 351 aa11.41□□□□□ -0.58
TTC39A-208ENST00000413473 A0A0G2JLM5 398 aa11.4□□□□□ -0.58
TTC39A-208ENST00000413473 FAM223BA6NKX1 122 aa11.4□□□□□ -0.58
TTC39A-208ENST00000413473 PRSS47A8MTI9 375 aa11.4□□□□□ -0.58
TTC39A-208ENST00000413473 SPRY2O43597 315 aa11.4□□□□□ -0.58
TTC39A-208ENST00000413473 ATP5LO75964 103 aa11.4□□□□□ -0.58
TTC39A-208ENST00000413473 DPM2O94777 84 aa11.4□□□□□ -0.58
TTC39A-208ENST00000413473 ZC2HC1BQ5TFG8 222 aa11.4□□□□□ -0.58
TTC39A-208ENST00000413473 FAM223AQ8IWN6 122 aa11.4□□□□□ -0.58
TTC39A-208ENST00000413473 MYOZ3Q8TDC0 251 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms