RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 FLI1Q01543 452 aaPredicted RBP7.08□□□□□ -1.28
SOX9-AS1-201ENST00000412640 CT83Q5H943 113 aa7.08□□□□□ -1.28
SOX9-AS1-201ENST00000412640 IBA57Q5T440 356 aaKnown RBP7.08□□□□□ -1.28
SOX9-AS1-201ENST00000412640 LCN12Q6JVE5 192 aa7.08□□□□□ -1.28
SOX9-AS1-201ENST00000412640 OR1N2Q8NGR9 330 aa7.08□□□□□ -1.28
SOX9-AS1-201ENST00000412640 C4orf3Q8WVX3 66 aa7.08□□□□□ -1.28
SOX9-AS1-201ENST00000412640 SRD5A3Q9H8P0 318 aa7.08□□□□□ -1.28
SOX9-AS1-201ENST00000412640 PSG8Q9UQ74 426 aa7.08□□□□□ -1.28
SOX9-AS1-201ENST00000412640 DYNC1H1Q14204 4646 aaKnown RBP7.08□□□□□ -1.28
SOX9-AS1-201ENST00000412640 HSPG2P98160 4391 aa7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 IGHV3-66A0A0C4DH42 116 aa7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 SMIM27A0A1W2PRY6 76 aa7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 TMEM213A2RRL7 107 aa7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 NUPR2A6NF83 97 aa7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 C1orf196B1AJZ1 125 aa7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 NPIPB6E9PJ23 425 aa7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 MGST1P10620 155 aaKnown RBP7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 BMI1P35226 326 aa7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 KLF5Q13887 457 aaPredicted RBP7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 RPEL1Q2QD12 228 aa7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 TM4SF20Q53R12 229 aa7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 SAMD13Q5VXD3 122 aa7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 LGALS9CQ6DKI2 356 aa7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 CEMP1Q6PRD7 247 aaPredicted RBP7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 NUDT10Q8NFP7 164 aa7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 NUDT11Q96G61 164 aa7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 RHPN1-AS1Q9BWJ2 59 aa7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 RNASE7Q9H1E1 156 aaKnown RBP7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 PPP1R14DQ9NXH3 145 aa7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 RPH3ALQ9UNE2 315 aa7.07□□□□□ -1.28
SOX9-AS1-201ENST00000412640 FAT2Q9NYQ8 4349 aa7.06□□□□□ -1.28
SOX9-AS1-201ENST00000412640 IGHV4OR15-8A0A075B7B6 117 aa7.06□□□□□ -1.28
SOX9-AS1-201ENST00000412640 IGHV3OR16-13A0A075B7E8 117 aa7.06□□□□□ -1.28
SOX9-AS1-201ENST00000412640 A0A087WW49 117 aa7.06□□□□□ -1.28
SOX9-AS1-201ENST00000412640 IGHV3-49A0A0A0MS15 119 aa7.06□□□□□ -1.28
SOX9-AS1-201ENST00000412640 TRAV8-1A0A0A6YYK1 113 aa7.06□□□□□ -1.28
SOX9-AS1-201ENST00000412640 IGHV3-74A0A0B4J1X5 117 aa7.06□□□□□ -1.28
SOX9-AS1-201ENST00000412640 PHOX2AO14813 284 aa7.06□□□□□ -1.28
SOX9-AS1-201ENST00000412640 FAM3BP58499 235 aaPredicted RBP7.06□□□□□ -1.28
SOX9-AS1-201ENST00000412640 RAB5BP61020 215 aa7.06□□□□□ -1.28
SOX9-AS1-201ENST00000412640 SAPCD1Q5SSQ6 148 aa7.06□□□□□ -1.28
SOX9-AS1-201ENST00000412640 PRNTQ86SH4 94 aa7.06□□□□□ -1.28
SOX9-AS1-201ENST00000412640 NHLRC2Q8NBF2 726 aa7.06□□□□□ -1.28
SOX9-AS1-201ENST00000412640 OR4B1Q8NGF8 309 aa7.06□□□□□ -1.28
SOX9-AS1-201ENST00000412640 DLX4Q92988 240 aaPredicted RBP7.06□□□□□ -1.28
SOX9-AS1-201ENST00000412640 NRN1Q9NPD7 142 aa7.06□□□□□ -1.28
SOX9-AS1-201ENST00000412640 IGKV2-40A0A087WW87 121 aaPredicted RBP7.05□□□□□ -1.28
SOX9-AS1-201ENST00000412640 LOC105371267A0A1B0GV96 52 aa7.05□□□□□ -1.28
SOX9-AS1-201ENST00000412640 A0A1W2PPQ1 181 aa7.05□□□□□ -1.28
SOX9-AS1-201ENST00000412640 FAM231BA6NCW3 169 aa7.05□□□□□ -1.28
SOX9-AS1-201ENST00000412640 GATCO43716 136 aaKnown RBP7.05□□□□□ -1.28
SOX9-AS1-201ENST00000412640 IGKV2D-40P01614 121 aaPredicted RBP7.05□□□□□ -1.28
SOX9-AS1-201ENST00000412640 HLA-DMBP28068 263 aa7.05□□□□□ -1.28
SOX9-AS1-201ENST00000412640 RPS10P46783 165 aaKnown RBP7.05□□□□□ -1.28
SOX9-AS1-201ENST00000412640 LINC00322Q6ZN03 302 aaPredicted RBP7.05□□□□□ -1.28
SOX9-AS1-201ENST00000412640 C9orf47Q6ZRZ4 202 aa7.05□□□□□ -1.28
SOX9-AS1-201ENST00000412640 SGK494Q96LW2 274 aa7.05□□□□□ -1.28
SOX9-AS1-201ENST00000412640 GFRA4Q9GZZ7 299 aa7.05□□□□□ -1.28
SOX9-AS1-201ENST00000412640 DNAH2Q9P225 4427 aa7.05□□□□□ -1.28
SOX9-AS1-201ENST00000412640 ZNF705GA8MUZ8 300 aaPredicted RBP7.04□□□□□ -1.28
SOX9-AS1-201ENST00000412640 ZNF705FA8MVS1 300 aaPredicted RBP7.04□□□□□ -1.28
SOX9-AS1-201ENST00000412640 LINC01619G3V211 115 aa7.04□□□□□ -1.28
SOX9-AS1-201ENST00000412640 SLURP1P55000 103 aa7.04□□□□□ -1.28
SOX9-AS1-201ENST00000412640 IGFL4Q6B9Z1 124 aa7.04□□□□□ -1.28
SOX9-AS1-201ENST00000412640 LINC00336Q6ZUF6 198 aa7.04□□□□□ -1.28
SOX9-AS1-201ENST00000412640 MAPKAPK5-AS1Q8N8E1 139 aa7.04□□□□□ -1.28
SOX9-AS1-201ENST00000412640 TSKUQ8WUA8 353 aa7.04□□□□□ -1.28
SOX9-AS1-201ENST00000412640 ZC2HC1AQ96GY0 325 aa7.04□□□□□ -1.28
SOX9-AS1-201ENST00000412640 C16orf92Q96LL3 132 aa7.04□□□□□ -1.28
SOX9-AS1-201ENST00000412640 VGLL1Q99990 258 aa7.04□□□□□ -1.28
SOX9-AS1-201ENST00000412640 RPP21Q9H633 154 aaKnown RBP7.04□□□□□ -1.28
SOX9-AS1-201ENST00000412640 LENEPQ9Y5L5 61 aa7.04□□□□□ -1.28
SOX9-AS1-201ENST00000412640 DNAH11Q96DT5 4516 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 C2orf70A6NJV1 201 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 A8MWL6 223 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 PRAC2D3DTV9 90 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 P01737 135 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 TRGC2P03986 189 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 CBLN1P23435 193 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 CRIP1P50238 77 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 FOXA3P55318 350 aaPredicted RBP7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 SYNJ2BPP57105 145 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 RPL19P84098 196 aaKnown RBP7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 COX19Q49B96 90 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 ACTL10Q5JWF8 245 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 RASL11AQ6T310 242 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 TCF24Q7RTU0 167 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 ZNF575Q86XF7 245 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 GBGT1Q8N5D6 347 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 RNF182Q8N6D2 247 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 DCANP1Q8TF63 244 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 DAZAP1Q96EP5 407 aaKnown RBP7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 C20orf173Q96LM9 149 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 KLK5Q9Y337 293 aaPredicted RBP7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 PKD1P98161 4303 aa7.03□□□□□ -1.28
SOX9-AS1-201ENST00000412640 TRBV7-9A0A0J9YWB2 115 aa7.02□□□□□ -1.29
SOX9-AS1-201ENST00000412640 IZUMO1RA6ND01 250 aa7.02□□□□□ -1.29
SOX9-AS1-201ENST00000412640 RBMY1FQ15415 496 aaKnown RBP7.02□□□□□ -1.29
SOX9-AS1-201ENST00000412640 PRR27Q6MZM9 219 aa7.02□□□□□ -1.29
SOX9-AS1-201ENST00000412640 LINC00477Q96M19 166 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms