RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.81□□□□□ -1
PTPRF-204ENST00000412568 SLAQ13239 276 aa8.81□□□□□ -1
PTPRF-204ENST00000412568 HOXA3O43365 443 aaPredicted RBP8.81□□□□□ -1
PTPRF-204ENST00000412568 SPRY2O43597 315 aa8.81□□□□□ -1
PTPRF-204ENST00000412568 IGLC2P0DOY2 106 aa8.81□□□□□ -1
PTPRF-204ENST00000412568 IGLC3P0DOY3 106 aa8.81□□□□□ -1
PTPRF-204ENST00000412568 BCL6BQ8N143 479 aaPredicted RBP8.81□□□□□ -1
PTPRF-204ENST00000412568 TMEM213A2RRL7 107 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 HSD52Q0P140 79 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 KMT2EQ8IZD2 1858 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 K7EIM0 57 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 SAP30O75446 220 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 MTURNQ8N3F0 131 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 THAP8Q8NA92 274 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 PYGO2Q9BRQ0 406 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 MS4A6AQ9H2W1 248 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 DAZ1Q9NQZ3 744 aaKnown RBP8.8□□□□□ -1
PTPRF-204ENST00000412568 PEMTQ9UBM1 199 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 F2Z2F3 143 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 IGLV2-23P01705 113 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 RASL11AQ6T310 242 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 Q6ZVH6 145 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 OR5A1Q8NGJ0 315 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 C18orf32Q8TCD1 76 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 USMG5Q96IX5 58 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 UBE2E2Q96LR5 201 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 SRSF8Q9BRL6 282 aaKnown RBP8.8□□□□□ -1
PTPRF-204ENST00000412568 F6UB75 175 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 Q0VG73 95 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 DEFB136Q30KP8 78 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 DTX2Q86UW9 622 aa8.8□□□□□ -1
PTPRF-204ENST00000412568 GTSCR1Q86UQ5 136 aa8.79□□□□□ -1
PTPRF-204ENST00000412568 VGLL1Q99990 258 aa8.79□□□□□ -1
PTPRF-204ENST00000412568 FRYLO94915 3013 aa8.79□□□□□ -1
PTPRF-204ENST00000412568 DPM2O94777 84 aa8.79□□□□□ -1
PTPRF-204ENST00000412568 STHQ8IWL8 128 aa8.79□□□□□ -1
PTPRF-204ENST00000412568 DYNAPQ8N1N2 210 aa8.79□□□□□ -1
PTPRF-204ENST00000412568 LYPD1Q8N2G4 141 aa8.79□□□□□ -1
PTPRF-204ENST00000412568 C14orf178Q8N769 122 aaPredicted RBP8.79□□□□□ -1
PTPRF-204ENST00000412568 STPG4Q8N801 248 aa8.79□□□□□ -1
PTPRF-204ENST00000412568 PRORYQ9H606 182 aa8.79□□□□□ -1
PTPRF-204ENST00000412568 TRAV8-2A0A0B4J237 113 aa8.79□□□□□ -1
PTPRF-204ENST00000412568 LINC01548A6NM66 108 aa8.79□□□□□ -1
PTPRF-204ENST00000412568 NPIPB6E9PJ23 425 aa8.79□□□□□ -1
PTPRF-204ENST00000412568 Q8N9W7 124 aa8.79□□□□□ -1
PTPRF-204ENST00000412568 C10orf105Q8TEF2 133 aa8.79□□□□□ -1
PTPRF-204ENST00000412568 SCGB1A1P11684 91 aa8.78□□□□□ -1
PTPRF-204ENST00000412568 HTN3P15516 51 aa8.78□□□□□ -1
PTPRF-204ENST00000412568 MAJINQ3KP22 176 aa8.78□□□□□ -1
PTPRF-204ENST00000412568 MRPL27Q9P0M9 148 aaKnown RBP8.78□□□□□ -1
PTPRF-204ENST00000412568 CPAMD8Q8IZJ3 1885 aa8.78□□□□□ -1
PTPRF-204ENST00000412568 ZNF292O60281 2723 aa8.78□□□□□ -1
PTPRF-204ENST00000412568 DEFB131AP59861 70 aa8.78□□□□□ -1
PTPRF-204ENST00000412568 C9orf139Q6ZV77 190 aa8.78□□□□□ -1
PTPRF-204ENST00000412568 C8orf31Q8N9H6 132 aa8.78□□□□□ -1
PTPRF-204ENST00000412568 CST9LQ9H4G1 147 aa8.78□□□□□ -1
PTPRF-204ENST00000412568 FAM223BA6NKX1 122 aa8.78□□□□□ -1
PTPRF-204ENST00000412568 EIF4EBP1Q13541 118 aaPredicted RBP8.78□□□□□ -1
PTPRF-204ENST00000412568 C8orf86Q6ZUL3 223 aa8.78□□□□□ -1
PTPRF-204ENST00000412568 FAM223AQ8IWN6 122 aa8.78□□□□□ -1
PTPRF-204ENST00000412568 MRPS16Q9Y3D3 137 aaKnown RBP8.78□□□□□ -1
PTPRF-204ENST00000412568 OVOL1O14753 267 aa8.77□□□□□ -1
PTPRF-204ENST00000412568 NUPR1O60356 82 aa8.77□□□□□ -1
PTPRF-204ENST00000412568 FRMD6-AS1P0C7T7 363 aa8.77□□□□□ -1
PTPRF-204ENST00000412568 KIR3DS1Q14943 382 aa8.77□□□□□ -1
PTPRF-204ENST00000412568 TRGV2A0A075B6R0 118 aa8.77□□□□□ -1.01
PTPRF-204ENST00000412568 TRAV12-2A0A075B6T6 113 aa8.77□□□□□ -1.01
PTPRF-204ENST00000412568 TEX22C9J3V5 150 aa8.77□□□□□ -1.01
PTPRF-204ENST00000412568 H3BRN7 92 aa8.77□□□□□ -1.01
PTPRF-204ENST00000412568 I3L2K1 104 aa8.77□□□□□ -1.01
PTPRF-204ENST00000412568 OCIAD2Q56VL3 154 aa8.77□□□□□ -1.01
PTPRF-204ENST00000412568 GEMIN7Q9H840 131 aaKnown RBP8.77□□□□□ -1.01
PTPRF-204ENST00000412568 A0A087WWL8 130 aa8.77□□□□□ -1.01
PTPRF-204ENST00000412568 IGLL1P15814 213 aa8.77□□□□□ -1.01
PTPRF-204ENST00000412568 DEFB1P60022 68 aa8.77□□□□□ -1.01
PTPRF-204ENST00000412568 SPINK13Q1W4C9 94 aa8.77□□□□□ -1.01
PTPRF-204ENST00000412568 GAGE13Q4V321 117 aa8.77□□□□□ -1.01
PTPRF-204ENST00000412568 FAM167A-AS1Q96KT0 104 aa8.77□□□□□ -1.01
PTPRF-204ENST00000412568 RCHY1Q96PM5 261 aa8.77□□□□□ -1.01
PTPRF-204ENST00000412568 TNFRSF18Q9Y5U5 241 aa8.77□□□□□ -1.01
PTPRF-204ENST00000412568 DSPP15924 2871 aaKnown RBP8.77□□□□□ -1.01
PTPRF-204ENST00000412568 RPL35AP18077 110 aaKnown RBP8.76□□□□□ -1.01
PTPRF-204ENST00000412568 GATA3P23771 443 aa8.76□□□□□ -1.01
PTPRF-204ENST00000412568 LMO4P61968 165 aa8.76□□□□□ -1.01
PTPRF-204ENST00000412568 MEIG1Q5JSS6 88 aa8.76□□□□□ -1.01
PTPRF-204ENST00000412568 OR9G4Q8NGQ1 327 aa8.76□□□□□ -1.01
PTPRF-204ENST00000412568 ZC2HC1AQ96GY0 325 aa8.76□□□□□ -1.01
PTPRF-204ENST00000412568 NXT2Q9NPJ8 142 aaKnown RBP8.76□□□□□ -1.01
PTPRF-204ENST00000412568 SMIM27A0A1W2PRY6 76 aa8.76□□□□□ -1.01
PTPRF-204ENST00000412568 CD5LO43866 347 aa8.76□□□□□ -1.01
PTPRF-204ENST00000412568 FAM231DQ6ZW35 169 aa8.76□□□□□ -1.01
PTPRF-204ENST00000412568 IGKCP01834 107 aa8.76□□□□□ -1.01
PTPRF-204ENST00000412568 MRPL52Q86TS9 123 aaKnown RBP8.76□□□□□ -1.01
PTPRF-204ENST00000412568 MRAP2Q96G30 205 aa8.76□□□□□ -1.01
PTPRF-204ENST00000412568 LINC00477Q96M19 166 aa8.76□□□□□ -1.01
PTPRF-204ENST00000412568 PDE6HQ13956 83 aa8.76□□□□□ -1.01
PTPRF-204ENST00000412568 CD300EQ496F6 205 aaPredicted RBP8.76□□□□□ -1.01
PTPRF-204ENST00000412568 ZC2HC1BQ5TFG8 222 aa8.76□□□□□ -1.01
PTPRF-204ENST00000412568 EXPH5Q8NEV8 1989 aa8.75□□□□□ -1.01
PTPRF-204ENST00000412568 HECTD1Q9ULT8 2610 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms