RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 NKX6-2Q9C056 277 aaPredicted RBP11.43□□□□□ -0.58
DDR1-230ENST00000412274 SH3BGRL3Q9H299 93 aa11.43□□□□□ -0.58
DDR1-230ENST00000412274 CTXND1A0A1B0GTU2 59 aa11.42□□□□□ -0.58
DDR1-230ENST00000412274 HMGB3O15347 200 aaKnown RBP11.42□□□□□ -0.58
DDR1-230ENST00000412274 LGALS9BQ3B8N2 356 aa11.42□□□□□ -0.58
DDR1-230ENST00000412274 NDFIP1Q9BT67 221 aa11.42□□□□□ -0.58
DDR1-230ENST00000412274 A0A0D9SG52 128 aa11.41□□□□□ -0.58
DDR1-230ENST00000412274 A0A1W2PRE2 83 aa11.41□□□□□ -0.58
DDR1-230ENST00000412274 H3BNG1 76 aa11.41□□□□□ -0.58
DDR1-230ENST00000412274 TCL1AP56279 114 aa11.41□□□□□ -0.58
DDR1-230ENST00000412274 GOLT1AQ6ZVE7 132 aa11.41□□□□□ -0.58
DDR1-230ENST00000412274 UBE2DNLQ8IWF7 75 aa11.41□□□□□ -0.58
DDR1-230ENST00000412274 C11orf72Q8NBR9 251 aa11.41□□□□□ -0.58
DDR1-230ENST00000412274 Q8TAT8 98 aa11.41□□□□□ -0.58
DDR1-230ENST00000412274 GSN-AS1Q9NRJ2 163 aa11.41□□□□□ -0.58
DDR1-230ENST00000412274 EIF5AP63241 154 aaKnown RBP11.4□□□□□ -0.58
DDR1-230ENST00000412274 ZNF415Q09FC8 603 aa11.4□□□□□ -0.58
DDR1-230ENST00000412274 FAM159AQ6UWV7 190 aa11.4□□□□□ -0.58
DDR1-230ENST00000412274 KCNRGQ8N5I3 272 aa11.4□□□□□ -0.58
DDR1-230ENST00000412274 RPH3ALQ9UNE2 315 aa11.4□□□□□ -0.58
DDR1-230ENST00000412274 TRAV21A0A0B4J279 112 aa11.39□□□□□ -0.59
DDR1-230ENST00000412274 GAGE12BA1L429 117 aa11.39□□□□□ -0.59
DDR1-230ENST00000412274 SPINK4O60575 86 aa11.39□□□□□ -0.59
DDR1-230ENST00000412274 EIF3GO75821 320 aaKnown RBP eCLIP11.39□□□□□ -0.59
DDR1-230ENST00000412274 GAGE7O76087 117 aa11.39□□□□□ -0.59
DDR1-230ENST00000412274 GAGE12FP0CL80 117 aa11.39□□□□□ -0.59
DDR1-230ENST00000412274 GAGE12GP0CL81 117 aa11.39□□□□□ -0.59
DDR1-230ENST00000412274 GAGE12IP0CL82 117 aa11.39□□□□□ -0.59
DDR1-230ENST00000412274 TDRG1Q3Y452 100 aa11.39□□□□□ -0.59
DDR1-230ENST00000412274 PRR9Q5T870 116 aa11.39□□□□□ -0.59
DDR1-230ENST00000412274 CYTL1Q9NRR1 136 aa11.39□□□□□ -0.59
DDR1-230ENST00000412274 TP53TG3Q9ULZ0 132 aa11.39□□□□□ -0.59
DDR1-230ENST00000412274 KLF12Q9Y4X4 402 aa11.39□□□□□ -0.59
DDR1-230ENST00000412274 VPS13DQ5THJ4 4388 aa11.38□□□□□ -0.59
DDR1-230ENST00000412274 TRGV11A0A075B6L2 103 aa11.38□□□□□ -0.59
DDR1-230ENST00000412274 TRGV2A0A075B6R0 118 aa11.38□□□□□ -0.59
DDR1-230ENST00000412274 TCRAP04437 139 aa11.38□□□□□ -0.59
DDR1-230ENST00000412274 SUMO1P63165 101 aaKnown RBP11.38□□□□□ -0.59
DDR1-230ENST00000412274 SLAQ13239 276 aa11.38□□□□□ -0.59
DDR1-230ENST00000412274 STOML3Q8TAV4 291 aa11.38□□□□□ -0.59
DDR1-230ENST00000412274 ATG101Q9BSB4 218 aa11.38□□□□□ -0.59
DDR1-230ENST00000412274 SPXQ9BT56 116 aa11.38□□□□□ -0.59
DDR1-230ENST00000412274 TREM1Q9NP99 234 aa11.38□□□□□ -0.59
DDR1-230ENST00000412274 EPDR1Q9UM22 224 aa11.38□□□□□ -0.59
DDR1-230ENST00000412274 TRGV1A0A0A0MS02 117 aa11.37□□□□□ -0.59
DDR1-230ENST00000412274 UMAD1C9J7I0 102 aa11.37□□□□□ -0.59
DDR1-230ENST00000412274 SEC11BP0C7V7 166 aa11.37□□□□□ -0.59
DDR1-230ENST00000412274 CCL18P55774 89 aa11.37□□□□□ -0.59
DDR1-230ENST00000412274 OR5I1Q13606 314 aa11.37□□□□□ -0.59
DDR1-230ENST00000412274 SAPCD1Q5SSQ6 148 aa11.37□□□□□ -0.59
DDR1-230ENST00000412274 Q6ZTI0 123 aa11.37□□□□□ -0.59
DDR1-230ENST00000412274 TMEM75Q8N9X5 138 aa11.37□□□□□ -0.59
DDR1-230ENST00000412274 KCNS1Q96KK3 526 aa11.37□□□□□ -0.59
DDR1-230ENST00000412274 KANTRA0A1W2PQU2 76 aa11.36□□□□□ -0.59
DDR1-230ENST00000412274 NUDT3O95989 172 aa11.36□□□□□ -0.59
DDR1-230ENST00000412274 PPT1P50897 306 aa11.36□□□□□ -0.59
DDR1-230ENST00000412274 ZFP69Q49AA0 526 aa11.36□□□□□ -0.59
DDR1-230ENST00000412274 IQCF2Q8IXL9 164 aa11.36□□□□□ -0.59
DDR1-230ENST00000412274 CYB561D1Q8N8Q1 229 aa11.36□□□□□ -0.59
DDR1-230ENST00000412274 TCEAL7Q9BRU2 100 aa11.36□□□□□ -0.59
DDR1-230ENST00000412274 GNG5P63218 68 aa11.35□□□□□ -0.59
DDR1-230ENST00000412274 ZNF726P1Q15940 193 aa11.35□□□□□ -0.59
DDR1-230ENST00000412274 HIST1H2BAQ96A08 127 aa11.35□□□□□ -0.59
DDR1-230ENST00000412274 PSG8Q9UQ74 426 aa11.35□□□□□ -0.59
DDR1-230ENST00000412274 ARL2-SNX15V9GYD0 113 aa11.35□□□□□ -0.59
DDR1-230ENST00000412274 DNAH6Q9C0G6 4158 aa11.35□□□□□ -0.59
DDR1-230ENST00000412274 TRAV26-1A0A087WT03 109 aa11.34□□□□□ -0.59
DDR1-230ENST00000412274 GGTLC3B5MD39 225 aa11.34□□□□□ -0.59
DDR1-230ENST00000412274 F6UZH7 168 aa11.34□□□□□ -0.59
DDR1-230ENST00000412274 SMLR1H3BR10 107 aa11.34□□□□□ -0.59
DDR1-230ENST00000412274 BCL2L11O43521 198 aa11.34□□□□□ -0.59
DDR1-230ENST00000412274 FLI1Q01543 452 aaPredicted RBP11.34□□□□□ -0.59
DDR1-230ENST00000412274 DPPA3Q6W0C5 159 aa11.34□□□□□ -0.59
DDR1-230ENST00000412274 LINC00336Q6ZUF6 198 aa11.34□□□□□ -0.59
DDR1-230ENST00000412274 SSX7Q7RTT5 188 aa11.34□□□□□ -0.59
DDR1-230ENST00000412274 TRAV8-1A0A0A6YYK1 113 aa11.33□□□□□ -0.6
DDR1-230ENST00000412274 MAP1LC3B2A6NCE7 125 aa11.33□□□□□ -0.6
DDR1-230ENST00000412274 IFNA7P01567 189 aa11.33□□□□□ -0.6
DDR1-230ENST00000412274 FHITP49789 147 aa11.33□□□□□ -0.6
DDR1-230ENST00000412274 TMEM183BQ1AE95 376 aa11.33□□□□□ -0.6
DDR1-230ENST00000412274 SMUG1Q53HV7 270 aa11.33□□□□□ -0.6
DDR1-230ENST00000412274 MUC21Q5SSG8 566 aa11.33□□□□□ -0.6
DDR1-230ENST00000412274 TMEM183AQ8IXX5 376 aa11.33□□□□□ -0.6
DDR1-230ENST00000412274 OR11H4Q8NGC9 324 aa11.33□□□□□ -0.6
DDR1-230ENST00000412274 RASL10AQ92737 203 aa11.33□□□□□ -0.6
DDR1-230ENST00000412274 TVP23CQ96ET8 276 aa11.33□□□□□ -0.6
DDR1-230ENST00000412274 ZNF471Q9BX82 626 aaPredicted RBP11.33□□□□□ -0.6
DDR1-230ENST00000412274 MAP1LC3BQ9GZQ8 125 aa11.33□□□□□ -0.6
DDR1-230ENST00000412274 TMPRSS5Q9H3S3 457 aa11.33□□□□□ -0.6
DDR1-230ENST00000412274 SDF2L1Q9HCN8 221 aa11.33□□□□□ -0.6
DDR1-230ENST00000412274 HOXA5P20719 270 aa11.32□□□□□ -0.6
DDR1-230ENST00000412274 LGALSLQ3ZCW2 172 aaPredicted RBP11.32□□□□□ -0.6
DDR1-230ENST00000412274 Q6ZQT7 251 aa11.32□□□□□ -0.6
DDR1-230ENST00000412274 FAM74A7A6NL05 159 aa11.31□□□□□ -0.6
DDR1-230ENST00000412274 PFDN1O60925 122 aa11.31□□□□□ -0.6
DDR1-230ENST00000412274 PFN1P07737 140 aaKnown RBP11.31□□□□□ -0.6
DDR1-230ENST00000412274 SOHLH1Q5JUK2 328 aa11.31□□□□□ -0.6
DDR1-230ENST00000412274 EIF5AL1Q6IS14 154 aaKnown RBP11.31□□□□□ -0.6
DDR1-230ENST00000412274 MDFICQ9P1T7 246 aa11.31□□□□□ -0.6
DDR1-230ENST00000412274 PRO0255Q9UI72 69 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms