RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 MRPS16Q9Y3D3 137 aaKnown RBP15.45■□□□□ 0.06
MSH6-202ENST00000411819 A6NHS1 94 aa15.44■□□□□ 0.06
MSH6-202ENST00000411819 IFNA5P01569 189 aa15.44■□□□□ 0.06
MSH6-202ENST00000411819 IGHV3-53P01767 116 aa15.44■□□□□ 0.06
MSH6-202ENST00000411819 KHDC3LQ587J8 217 aa15.44■□□□□ 0.06
MSH6-202ENST00000411819 SCGB1C1Q8TD33 95 aa15.44■□□□□ 0.06
MSH6-202ENST00000411819 KRTAP1-5Q9BYS1 174 aa15.44■□□□□ 0.06
MSH6-202ENST00000411819 Q9H3A6 140 aa15.44■□□□□ 0.06
MSH6-202ENST00000411819 RPL12P30050 165 aaKnown RBP15.43■□□□□ 0.06
MSH6-202ENST00000411819 A0A096LPF7 62 aa15.42■□□□□ 0.06
MSH6-202ENST00000411819 TAS2R45P59539 299 aa15.42■□□□□ 0.06
MSH6-202ENST00000411819 ZNF415Q09FC8 603 aa15.42■□□□□ 0.06
MSH6-202ENST00000411819 MBD2Q9UBB5 411 aa15.42■□□□□ 0.06
MSH6-202ENST00000411819 RBAKDNA6NC62 111 aa15.41■□□□□ 0.06
MSH6-202ENST00000411819 MUC21Q5SSG8 566 aa15.41■□□□□ 0.06
MSH6-202ENST00000411819 LYPD1Q8N2G4 141 aa15.41■□□□□ 0.06
MSH6-202ENST00000411819 ST6GAL2Q96JF0 529 aa15.41■□□□□ 0.06
MSH6-202ENST00000411819 TRBV7-9A0A0J9YWB2 115 aa15.4■□□□□ 0.06
MSH6-202ENST00000411819 PAX4O43316 350 aa15.4■□□□□ 0.06
MSH6-202ENST00000411819 EIF3GO75821 320 aaKnown RBP eCLIP15.4■□□□□ 0.06
MSH6-202ENST00000411819 HYLS1Q96M11 299 aa15.4■□□□□ 0.06
MSH6-202ENST00000411819 RPH3ALQ9UNE2 315 aa15.4■□□□□ 0.06
MSH6-202ENST00000411819 ICOSQ9Y6W8 199 aa15.4■□□□□ 0.06
MSH6-202ENST00000411819 A0A1W2PPQ1 181 aa15.39■□□□□ 0.05
MSH6-202ENST00000411819 ZNF266Q14584 549 aa15.38■□□□□ 0.05
MSH6-202ENST00000411819 DIRC3C9JPN6 131 aa15.37■□□□□ 0.05
MSH6-202ENST00000411819 CMTM2Q8TAZ6 248 aa15.37■□□□□ 0.05
MSH6-202ENST00000411819 PRO0255Q9UI72 69 aa15.37■□□□□ 0.05
MSH6-202ENST00000411819 ABCA13Q86UQ4 5058 aa15.37■□□□□ 0.05
MSH6-202ENST00000411819 ACOT6Q3I5F7 207 aaPredicted RBP15.36■□□□□ 0.05
MSH6-202ENST00000411819 SPATA12Q7Z6I5 190 aa15.36■□□□□ 0.05
MSH6-202ENST00000411819 C8orf49Q96NF6 230 aa15.36■□□□□ 0.05
MSH6-202ENST00000411819 NAGKQ9UJ70 344 aa15.36■□□□□ 0.05
MSH6-202ENST00000411819 LRP1BQ9NZR2 4599 aa15.35■□□□□ 0.05
MSH6-202ENST00000411819 A0A1W2PPV4 95 aa15.35■□□□□ 0.05
MSH6-202ENST00000411819 TMEM183BQ1AE95 376 aa15.35■□□□□ 0.05
MSH6-202ENST00000411819 FAM74A1Q5RGS3 127 aa15.35■□□□□ 0.05
MSH6-202ENST00000411819 FAM159AQ6UWV7 190 aa15.35■□□□□ 0.05
MSH6-202ENST00000411819 TMEM183AQ8IXX5 376 aa15.35■□□□□ 0.05
MSH6-202ENST00000411819 WFDC1Q9HC57 220 aa15.35■□□□□ 0.05
MSH6-202ENST00000411819 OTORQ9NRC9 128 aa15.35■□□□□ 0.05
MSH6-202ENST00000411819 MDFICQ9P1T7 246 aa15.35■□□□□ 0.05
MSH6-202ENST00000411819 LENEPQ9Y5L5 61 aa15.35■□□□□ 0.05
MSH6-202ENST00000411819 PGPA6NDG6 321 aa15.34■□□□□ 0.05
MSH6-202ENST00000411819 SIVA1O15304 175 aa15.34■□□□□ 0.05
MSH6-202ENST00000411819 CRYBA4P53673 196 aa15.34■□□□□ 0.05
MSH6-202ENST00000411819 RAB2AP61019 212 aa15.34■□□□□ 0.05
MSH6-202ENST00000411819 SLAQ13239 276 aa15.34■□□□□ 0.05
MSH6-202ENST00000411819 Q6AWC8 147 aa15.34■□□□□ 0.05
MSH6-202ENST00000411819 HHLA3Q9XRX5 114 aa15.34■□□□□ 0.05
MSH6-202ENST00000411819 TRGV11A0A075B6L2 103 aa15.33■□□□□ 0.04
MSH6-202ENST00000411819 TRGV4A0A0C4DH28 118 aa15.33■□□□□ 0.04
MSH6-202ENST00000411819 NXPH4O95158 308 aa15.33■□□□□ 0.04
MSH6-202ENST00000411819 LINC00315P59091 139 aa15.33■□□□□ 0.04
MSH6-202ENST00000411819 FHL2Q14192 279 aa15.33■□□□□ 0.04
MSH6-202ENST00000411819 PQLC2Q6ZP29 291 aa15.33■□□□□ 0.04
MSH6-202ENST00000411819 HSPG2P98160 4391 aa15.32■□□□□ 0.04
MSH6-202ENST00000411819 HMGB3O15347 200 aaKnown RBP15.32■□□□□ 0.04
MSH6-202ENST00000411819 SFTA3P0C7M3 94 aa15.32■□□□□ 0.04
MSH6-202ENST00000411819 GOLT1AQ6ZVE7 132 aa15.32■□□□□ 0.04
MSH6-202ENST00000411819 TMED6Q8WW62 240 aa15.32■□□□□ 0.04
MSH6-202ENST00000411819 CDK2AP2O75956 126 aa15.31■□□□□ 0.04
MSH6-202ENST00000411819 BTF3P20290 206 aaKnown RBP15.31■□□□□ 0.04
MSH6-202ENST00000411819 MRPL23Q16540 153 aaKnown RBP15.31■□□□□ 0.04
MSH6-202ENST00000411819 F6UZH7 168 aa15.3■□□□□ 0.04
MSH6-202ENST00000411819 OR10G4Q8NGN3 311 aa15.3■□□□□ 0.04
MSH6-202ENST00000411819 OR10G9Q8NGN4 311 aa15.3■□□□□ 0.04
MSH6-202ENST00000411819 OR10G7Q8NGN6 311 aa15.3■□□□□ 0.04
MSH6-202ENST00000411819 ZNF479Q96JC4 524 aa15.3■□□□□ 0.04
MSH6-202ENST00000411819 SPXQ9BT56 116 aa15.3■□□□□ 0.04
MSH6-202ENST00000411819 ALG5Q9Y673 324 aa15.3■□□□□ 0.04
MSH6-202ENST00000411819 GNG5P63218 68 aa15.29■□□□□ 0.04
MSH6-202ENST00000411819 NEGR1Q7Z3B1 354 aa15.29■□□□□ 0.04
MSH6-202ENST00000411819 PCNPQ8WW12 178 aaKnown RBP15.29■□□□□ 0.04
MSH6-202ENST00000411819 TRAV8-1A0A0A6YYK1 113 aa15.28■□□□□ 0.04
MSH6-202ENST00000411819 SRIP30626 198 aa15.28■□□□□ 0.04
MSH6-202ENST00000411819 CDC34P49427 236 aaPredicted RBP15.28■□□□□ 0.04
MSH6-202ENST00000411819 LYPD5Q6UWN5 251 aa15.28■□□□□ 0.04
MSH6-202ENST00000411819 HSD17B11Q8NBQ5 300 aa15.28■□□□□ 0.04
MSH6-202ENST00000411819 TREM1Q9NP99 234 aa15.28■□□□□ 0.04
MSH6-202ENST00000411819 TRAV21A0A0B4J279 112 aa15.27■□□□□ 0.04
MSH6-202ENST00000411819 ARL14EPLP0DKL9 152 aa15.27■□□□□ 0.04
MSH6-202ENST00000411819 KRTAP10-2P60368 255 aa15.27■□□□□ 0.04
MSH6-202ENST00000411819 MAPKAPK5-AS1Q8N8E1 139 aa15.27■□□□□ 0.04
MSH6-202ENST00000411819 RASL10AQ92737 203 aa15.27■□□□□ 0.04
MSH6-202ENST00000411819 KRTAP4-5Q9BYR2 181 aa15.27■□□□□ 0.04
MSH6-202ENST00000411819 K7EQD1 137 aa15.26■□□□□ 0.03
MSH6-202ENST00000411819 GYPEP15421 78 aa15.26■□□□□ 0.03
MSH6-202ENST00000411819 TDRG1Q3Y452 100 aa15.26■□□□□ 0.03
MSH6-202ENST00000411819 GNRH2O43555 120 aa15.25■□□□□ 0.03
MSH6-202ENST00000411819 ARL6IP6Q8N6S5 226 aa15.25■□□□□ 0.03
MSH6-202ENST00000411819 SGK494Q96LW2 274 aa15.25■□□□□ 0.03
MSH6-202ENST00000411819 NDFIP1Q9BT67 221 aa15.25■□□□□ 0.03
MSH6-202ENST00000411819 SDF2L1Q9HCN8 221 aa15.25■□□□□ 0.03
MSH6-202ENST00000411819 TRAV4A0A0B4J268 109 aa15.24■□□□□ 0.03
MSH6-202ENST00000411819 IGHV3-16A0A0C4DH30 117 aa15.24■□□□□ 0.03
MSH6-202ENST00000411819 M0R2P5 195 aa15.24■□□□□ 0.03
MSH6-202ENST00000411819 ORM1P02763 201 aa15.24■□□□□ 0.03
MSH6-202ENST00000411819 TYMSP04818 313 aa15.24■□□□□ 0.03
MSH6-202ENST00000411819 Q6ZRN7 208 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms