RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 C8orf86Q6ZUL3 223 aa12.18□□□□□ -0.46
HOXD3-202ENST00000410016 CSTL1Q9H114 145 aa12.18□□□□□ -0.46
HOXD3-202ENST00000410016 FGF6P10767 208 aa12.18□□□□□ -0.46
HOXD3-202ENST00000410016 HIST1H1AQ02539 215 aaPredicted RBP12.18□□□□□ -0.46
HOXD3-202ENST00000410016 DEFB125Q8N687 156 aa12.18□□□□□ -0.46
HOXD3-202ENST00000410016 MRPL53Q96EL3 112 aaKnown RBP12.18□□□□□ -0.46
HOXD3-202ENST00000410016 TAX1BP3O14907 124 aa12.17□□□□□ -0.46
HOXD3-202ENST00000410016 IGHV4-39P01824 125 aa12.17□□□□□ -0.46
HOXD3-202ENST00000410016 ATP5G2Q06055 141 aa12.17□□□□□ -0.46
HOXD3-202ENST00000410016 CACNG7P62955 275 aa12.16□□□□□ -0.46
HOXD3-202ENST00000410016 IFI27L1Q96BM0 104 aa12.16□□□□□ -0.46
HOXD3-202ENST00000410016 TRAV41A0A0B4J266 112 aa12.16□□□□□ -0.46
HOXD3-202ENST00000410016 CRIP2P52943 208 aaPredicted RBP12.16□□□□□ -0.46
HOXD3-202ENST00000410016 C9orf47Q6ZRZ4 202 aa12.16□□□□□ -0.46
HOXD3-202ENST00000410016 ATP6V0BQ99437 205 aa12.16□□□□□ -0.46
HOXD3-202ENST00000410016 LINC00527Q9UJ94 153 aa12.16□□□□□ -0.46
HOXD3-202ENST00000410016 MOB4Q9Y3A3 225 aa12.16□□□□□ -0.46
HOXD3-202ENST00000410016 IGHV3OR16-10A0A075B7F0 116 aa12.15□□□□□ -0.46
HOXD3-202ENST00000410016 SNAI2O43623 268 aa12.15□□□□□ -0.46
HOXD3-202ENST00000410016 PRORYQ9H606 182 aa12.15□□□□□ -0.46
HOXD3-202ENST00000410016 TNFRSF6BO95407 300 aa12.15□□□□□ -0.46
HOXD3-202ENST00000410016 TMEM78Q5T7P6 136 aa12.15□□□□□ -0.46
HOXD3-202ENST00000410016 Q6ZQT7 251 aa12.15□□□□□ -0.46
HOXD3-202ENST00000410016 MAP1LC3AQ9H492 121 aa12.15□□□□□ -0.46
HOXD3-202ENST00000410016 HIF1ANQ9NWT6 349 aa12.15□□□□□ -0.46
HOXD3-202ENST00000410016 IGHV7-4-1A0A0J9YVY3 117 aa12.14□□□□□ -0.47
HOXD3-202ENST00000410016 OR1N2Q8NGR9 330 aa12.14□□□□□ -0.47
HOXD3-202ENST00000410016 ABCA2Q9BZC7 2435 aa12.14□□□□□ -0.47
HOXD3-202ENST00000410016 IGHV1-69DA0A0B4J2H0 117 aa12.14□□□□□ -0.47
HOXD3-202ENST00000410016 FAM223BA6NKX1 122 aa12.14□□□□□ -0.47
HOXD3-202ENST00000410016 IGHV1-69P01742 117 aa12.14□□□□□ -0.47
HOXD3-202ENST00000410016 GATA1P15976 413 aaPredicted RBP12.14□□□□□ -0.47
HOXD3-202ENST00000410016 GNLYP22749 145 aa12.14□□□□□ -0.47
HOXD3-202ENST00000410016 FAM223AQ8IWN6 122 aa12.14□□□□□ -0.47
HOXD3-202ENST00000410016 GLMPQ8WWB7 406 aa12.14□□□□□ -0.47
HOXD3-202ENST00000410016 BRD3OSQ6XYD6 125 aa12.13□□□□□ -0.47
HOXD3-202ENST00000410016 SPTAN1Q13813 2472 aaKnown RBP12.13□□□□□ -0.47
HOXD3-202ENST00000410016 COL12A1Q99715 3063 aa12.13□□□□□ -0.47
HOXD3-202ENST00000410016 EVI2AP22794 236 aa12.13□□□□□ -0.47
HOXD3-202ENST00000410016 BOD1L2Q8IYS8 172 aa12.13□□□□□ -0.47
HOXD3-202ENST00000410016 MEGF9Q9H1U4 602 aa12.13□□□□□ -0.47
HOXD3-202ENST00000410016 TRGV3P03979 118 aa12.12□□□□□ -0.47
HOXD3-202ENST00000410016 WFDC3Q8IUB2 231 aa12.12□□□□□ -0.47
HOXD3-202ENST00000410016 NXT2Q9NPJ8 142 aaKnown RBP12.12□□□□□ -0.47
HOXD3-202ENST00000410016 IGLV2-18A0A075B6J9 118 aa12.12□□□□□ -0.47
HOXD3-202ENST00000410016 IGHV4-61A0A0C4DH41 118 aa12.12□□□□□ -0.47
HOXD3-202ENST00000410016 CD5LO43866 347 aa12.12□□□□□ -0.47
HOXD3-202ENST00000410016 FCER1GP30273 86 aa12.12□□□□□ -0.47
HOXD3-202ENST00000410016 UNQ9165/PRO28630Q6UXU0 137 aa12.12□□□□□ -0.47
HOXD3-202ENST00000410016 C20orf173Q96LM9 149 aa12.12□□□□□ -0.47
HOXD3-202ENST00000410016 DKK2Q9UBU2 259 aa12.12□□□□□ -0.47
HOXD3-202ENST00000410016 SMAD7O15105 426 aaKnown RBP12.11□□□□□ -0.47
HOXD3-202ENST00000410016 TRBV12-3P01733 135 aa12.11□□□□□ -0.47
HOXD3-202ENST00000410016 IGF1P05019 195 aa12.11□□□□□ -0.47
HOXD3-202ENST00000410016 LEPP41159 167 aa12.11□□□□□ -0.47
HOXD3-202ENST00000410016 ERASQ7Z444 233 aa12.11□□□□□ -0.47
HOXD3-202ENST00000410016 GPHB5Q86YW7 130 aa12.11□□□□□ -0.47
HOXD3-202ENST00000410016 IGHV4-4A0A075B6R2 117 aa12.11□□□□□ -0.47
HOXD3-202ENST00000410016 C16orf92Q96LL3 132 aa12.11□□□□□ -0.47
HOXD3-202ENST00000410016 C18orf15Q96N68 181 aa12.11□□□□□ -0.47
HOXD3-202ENST00000410016 TRAV40A0A0B4J280 105 aa12.1□□□□□ -0.47
HOXD3-202ENST00000410016 ARL3P36405 182 aa12.1□□□□□ -0.47
HOXD3-202ENST00000410016 PRR9Q5T870 116 aa12.1□□□□□ -0.47
HOXD3-202ENST00000410016 VAMP3Q15836 100 aa12.1□□□□□ -0.47
HOXD3-202ENST00000410016 TMEM97Q5BJF2 176 aa12.1□□□□□ -0.47
HOXD3-202ENST00000410016 CBY3A6NI87 242 aa12.09□□□□□ -0.47
HOXD3-202ENST00000410016 C9orf139Q6ZV77 190 aa12.09□□□□□ -0.47
HOXD3-202ENST00000410016 NRACQ8N912 160 aa12.09□□□□□ -0.47
HOXD3-202ENST00000410016 OR2K2Q8NGT1 345 aa12.09□□□□□ -0.47
HOXD3-202ENST00000410016 ZMAT4Q9H898 229 aa12.09□□□□□ -0.47
HOXD3-202ENST00000410016 IGHV4-38-2P0DP08 117 aa12.08□□□□□ -0.47
HOXD3-202ENST00000410016 TCTAP57738 103 aa12.08□□□□□ -0.47
HOXD3-202ENST00000410016 Q8N8P6 123 aa12.08□□□□□ -0.47
HOXD3-202ENST00000410016 HHLA3Q9XRX5 114 aa12.08□□□□□ -0.47
HOXD3-202ENST00000410016 LENEPQ9Y5L5 61 aa12.08□□□□□ -0.47
HOXD3-202ENST00000410016 NDUFA4O00483 81 aa12.08□□□□□ -0.48
HOXD3-202ENST00000410016 SOCS3O14543 225 aa12.08□□□□□ -0.48
HOXD3-202ENST00000410016 BRI3O95415 125 aa12.08□□□□□ -0.48
HOXD3-202ENST00000410016 ODF1Q14990 250 aa12.08□□□□□ -0.48
HOXD3-202ENST00000410016 VPS25Q9BRG1 176 aa12.08□□□□□ -0.48
HOXD3-202ENST00000410016 IGHG2P01859 326 aa12.07□□□□□ -0.48
HOXD3-202ENST00000410016 PCP2Q8IVA1 136 aa12.07□□□□□ -0.48
HOXD3-202ENST00000410016 SIVA1O15304 175 aa12.07□□□□□ -0.48
HOXD3-202ENST00000410016 SEC11AP67812 179 aa12.07□□□□□ -0.48
HOXD3-202ENST00000410016 ZFAND2AQ8N6M9 145 aa12.07□□□□□ -0.48
HOXD3-202ENST00000410016 C10orf105Q8TEF2 133 aa12.07□□□□□ -0.48
HOXD3-202ENST00000410016 TMEM158Q8WZ71 300 aa12.07□□□□□ -0.48
HOXD3-202ENST00000410016 TRAV26-2A0A0B4J265 109 aa12.06□□□□□ -0.48
HOXD3-202ENST00000410016 RNF151Q2KHN1 245 aa12.06□□□□□ -0.48
HOXD3-202ENST00000410016 ADAMTSL5Q6ZMM2 481 aa12.06□□□□□ -0.48
HOXD3-202ENST00000410016 OR9G4Q8NGQ1 327 aa12.06□□□□□ -0.48
HOXD3-202ENST00000410016 LINC00477Q96M19 166 aa12.06□□□□□ -0.48
HOXD3-202ENST00000410016 PIMREGQ9BSJ6 248 aa12.06□□□□□ -0.48
HOXD3-202ENST00000410016 KLK15Q9H2R5 256 aa12.06□□□□□ -0.48
HOXD3-202ENST00000410016 LY6EQ16553 131 aa12.06□□□□□ -0.48
HOXD3-202ENST00000410016 OR4C5Q8NGB2 326 aa12.06□□□□□ -0.48
HOXD3-202ENST00000410016 SPANXN1Q5VSR9 72 aa12.05□□□□□ -0.48
HOXD3-202ENST00000410016 AMMECR1LQ6DCA0 310 aa12.05□□□□□ -0.48
HOXD3-202ENST00000410016 USMG5Q96IX5 58 aa12.05□□□□□ -0.48
HOXD3-202ENST00000410016 TRAV8-6A0A0B4J262 113 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms