RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 FAM74A3Q4VXF1 159 aa12.08□□□□□ -0.48
TSPAN4-208ENST00000409531 SMUG1Q53HV7 270 aa12.08□□□□□ -0.48
TSPAN4-208ENST00000409531 ZFAND2AQ8N6M9 145 aa12.08□□□□□ -0.48
TSPAN4-208ENST00000409531 SMIM12Q96EX1 92 aa12.08□□□□□ -0.48
TSPAN4-208ENST00000409531 WWC2-AS2Q96NR7 200 aa12.08□□□□□ -0.48
TSPAN4-208ENST00000409531 RCHY1Q96PM5 261 aa12.08□□□□□ -0.48
TSPAN4-208ENST00000409531 XCL2Q9UBD3 114 aa12.08□□□□□ -0.48
TSPAN4-208ENST00000409531 C9JCJ5 164 aa12.07□□□□□ -0.48
TSPAN4-208ENST00000409531 INSP01308 110 aa12.07□□□□□ -0.48
TSPAN4-208ENST00000409531 CENPWQ5EE01 88 aa12.07□□□□□ -0.48
TSPAN4-208ENST00000409531 SOHLH1Q5JUK2 328 aa12.07□□□□□ -0.48
TSPAN4-208ENST00000409531 TMEM183AQ8IXX5 376 aa12.07□□□□□ -0.48
TSPAN4-208ENST00000409531 TVP23CQ96ET8 276 aa12.07□□□□□ -0.48
TSPAN4-208ENST00000409531 IGF2BP2-AS1Q96M15 143 aa12.07□□□□□ -0.48
TSPAN4-208ENST00000409531 SMIM7Q9BQ49 75 aa12.07□□□□□ -0.48
TSPAN4-208ENST00000409531 C20orf144Q9BQM9 153 aa12.07□□□□□ -0.48
TSPAN4-208ENST00000409531 TRAV12-2A0A075B6T6 113 aa12.06□□□□□ -0.48
TSPAN4-208ENST00000409531 ZNF727A8MUV8 499 aa12.06□□□□□ -0.48
TSPAN4-208ENST00000409531 C9JQL5 133 aa12.06□□□□□ -0.48
TSPAN4-208ENST00000409531 J3KRW8 73 aa12.06□□□□□ -0.48
TSPAN4-208ENST00000409531 Q6ZWC4 215 aa12.06□□□□□ -0.48
TSPAN4-208ENST00000409531 COX8CQ7Z4L0 72 aa12.06□□□□□ -0.48
TSPAN4-208ENST00000409531 SPATA25Q9BR10 227 aa12.06□□□□□ -0.48
TSPAN4-208ENST00000409531 C7orf71A4D174 169 aa12.05□□□□□ -0.48
TSPAN4-208ENST00000409531 CRXO43186 299 aaPredicted RBP12.05□□□□□ -0.48
TSPAN4-208ENST00000409531 GIG44P09565 113 aaPredicted RBP12.05□□□□□ -0.48
TSPAN4-208ENST00000409531 RNASE4P34096 147 aaKnown RBP12.05□□□□□ -0.48
TSPAN4-208ENST00000409531 NDUFA5Q16718 116 aa12.05□□□□□ -0.48
TSPAN4-208ENST00000409531 GFI1BQ5VTD9 330 aa12.05□□□□□ -0.48
TSPAN4-208ENST00000409531 TMEM256Q8N2U0 113 aa12.05□□□□□ -0.48
TSPAN4-208ENST00000409531 C8orf49Q96NF6 230 aa12.05□□□□□ -0.48
TSPAN4-208ENST00000409531 NIPSNAP3BQ9BS92 247 aa12.05□□□□□ -0.48
TSPAN4-208ENST00000409531 BIN3Q9NQY0 253 aa12.05□□□□□ -0.48
TSPAN4-208ENST00000409531 TRBV20OR9-2A0A075B6H5 130 aa12.04□□□□□ -0.48
TSPAN4-208ENST00000409531 SFTA3P0C7M3 94 aa12.04□□□□□ -0.48
TSPAN4-208ENST00000409531 MLST8Q9BVC4 326 aa12.04□□□□□ -0.48
TSPAN4-208ENST00000409531 GOLT1BQ9Y3E0 138 aa12.04□□□□□ -0.48
TSPAN4-208ENST00000409531 LY96Q9Y6Y9 160 aa12.04□□□□□ -0.48
TSPAN4-208ENST00000409531 STAB2Q8WWQ8 2551 aa12.04□□□□□ -0.48
TSPAN4-208ENST00000409531 TRAV12-3A0A0B4J271 114 aa12.03□□□□□ -0.48
TSPAN4-208ENST00000409531 TRAV21A0A0B4J279 112 aa12.03□□□□□ -0.48
TSPAN4-208ENST00000409531 GCGP01275 180 aa12.03□□□□□ -0.48
TSPAN4-208ENST00000409531 BTN1A1Q13410 526 aa12.03□□□□□ -0.48
TSPAN4-208ENST00000409531 Q6AWC8 147 aa12.03□□□□□ -0.48
TSPAN4-208ENST00000409531 TMEM208Q9BTX3 173 aa12.03□□□□□ -0.48
TSPAN4-208ENST00000409531 PFN1P07737 140 aaKnown RBP12.02□□□□□ -0.49
TSPAN4-208ENST00000409531 MGST1P10620 155 aaKnown RBP12.02□□□□□ -0.49
TSPAN4-208ENST00000409531 KIR3DS1Q14943 382 aa12.02□□□□□ -0.49
TSPAN4-208ENST00000409531 TMEM241Q24JQ0 296 aa12.02□□□□□ -0.49
TSPAN4-208ENST00000409531 DEFB135Q30KP9 77 aa12.02□□□□□ -0.49
TSPAN4-208ENST00000409531 FAM162BQ5T6X4 162 aa12.02□□□□□ -0.49
TSPAN4-208ENST00000409531 PRR9Q5T870 116 aa12.02□□□□□ -0.49
TSPAN4-208ENST00000409531 NHLRC2Q8NBF2 726 aa12.02□□□□□ -0.49
TSPAN4-208ENST00000409531 CSNK1G2-AS1Q8NCQ2 148 aa12.02□□□□□ -0.49
TSPAN4-208ENST00000409531 ZC2HC1AQ96GY0 325 aa12.02□□□□□ -0.49
TSPAN4-208ENST00000409531 TP53TG1Q9Y2A0 90 aa12.02□□□□□ -0.49
TSPAN4-208ENST00000409531 FABP5P3A8MUU1 101 aa12.01□□□□□ -0.49
TSPAN4-208ENST00000409531 H7BYZ3 331 aa12.01□□□□□ -0.49
TSPAN4-208ENST00000409531 ZNF324O75467 553 aaPredicted RBP12.01□□□□□ -0.49
TSPAN4-208ENST00000409531 RNF183Q96D59 192 aa12.01□□□□□ -0.49
TSPAN4-208ENST00000409531 NAT8Q9UHE5 227 aa12.01□□□□□ -0.49
TSPAN4-208ENST00000409531 HUWE1Q7Z6Z7 4374 aaKnown RBP12□□□□□ -0.49
TSPAN4-208ENST00000409531 TMEM218A2RU14 115 aa12□□□□□ -0.49
TSPAN4-208ENST00000409531 IGLV2-8P01709 118 aa12□□□□□ -0.49
TSPAN4-208ENST00000409531 OCC1Q8TAD7 63 aa12□□□□□ -0.49
TSPAN4-208ENST00000409531 LINC01587Q99440 93 aa12□□□□□ -0.49
TSPAN4-208ENST00000409531 PYGO2Q9BRQ0 406 aa12□□□□□ -0.49
TSPAN4-208ENST00000409531 TENM3Q9P273 2699 aa11.99□□□□□ -0.49
TSPAN4-208ENST00000409531 IGHV3OR16-12A0A075B7B8 117 aa11.99□□□□□ -0.49
TSPAN4-208ENST00000409531 PGPEP1LA6NFU8 196 aa11.99□□□□□ -0.49
TSPAN4-208ENST00000409531 SPRY2O43597 315 aa11.99□□□□□ -0.49
TSPAN4-208ENST00000409531 ZNF80P51504 273 aaPredicted RBP11.99□□□□□ -0.49
TSPAN4-208ENST00000409531 PRR27Q6MZM9 219 aa11.99□□□□□ -0.49
TSPAN4-208ENST00000409531 ZNF705AQ6ZN79 300 aaPredicted RBP11.99□□□□□ -0.49
TSPAN4-208ENST00000409531 C1orf158Q8N1D5 194 aa11.99□□□□□ -0.49
TSPAN4-208ENST00000409531 DAZAP1Q96EP5 407 aaKnown RBP11.99□□□□□ -0.49
TSPAN4-208ENST00000409531 F8W036 122 aa11.98□□□□□ -0.49
TSPAN4-208ENST00000409531 RBMY1A1P0DJD3 496 aaKnown RBP11.98□□□□□ -0.49
TSPAN4-208ENST00000409531 RBMY1CP0DJD4 496 aa11.98□□□□□ -0.49
TSPAN4-208ENST00000409531 RBMY1FQ15415 496 aaKnown RBP11.98□□□□□ -0.49
TSPAN4-208ENST00000409531 FAM159AQ6UWV7 190 aa11.98□□□□□ -0.49
TSPAN4-208ENST00000409531 LINC01551Q86U37 167 aa11.98□□□□□ -0.49
TSPAN4-208ENST00000409531 NEU1Q99519 415 aa11.98□□□□□ -0.49
TSPAN4-208ENST00000409531 SEC11CQ9BY50 192 aa11.98□□□□□ -0.49
TSPAN4-208ENST00000409531 SMIM9A6NGZ8 99 aa11.97□□□□□ -0.49
TSPAN4-208ENST00000409531 SH2D1AO60880 128 aa11.97□□□□□ -0.49
TSPAN4-208ENST00000409531 PNRC1Q12796 327 aaPredicted RBP11.97□□□□□ -0.49
TSPAN4-208ENST00000409531 KCNS1Q96KK3 526 aa11.97□□□□□ -0.49
TSPAN4-208ENST00000409531 LINC00467Q9BRT7 94 aa11.97□□□□□ -0.49
TSPAN4-208ENST00000409531 SDF2L1Q9HCN8 221 aa11.97□□□□□ -0.49
TSPAN4-208ENST00000409531 RETNQ9HD89 108 aa11.97□□□□□ -0.49
TSPAN4-208ENST00000409531 IGHV1OR15-1A0A075B7D0 117 aa11.96□□□□□ -0.49
TSPAN4-208ENST00000409531 K7EN84 100 aa11.96□□□□□ -0.49
TSPAN4-208ENST00000409531 CRIP1P50238 77 aa11.96□□□□□ -0.49
TSPAN4-208ENST00000409531 OR11H2Q8NH07 326 aa11.96□□□□□ -0.49
TSPAN4-208ENST00000409531 OVOL2Q9BRP0 275 aa11.96□□□□□ -0.49
TSPAN4-208ENST00000409531 NAGKQ9UJ70 344 aa11.96□□□□□ -0.49
TSPAN4-208ENST00000409531 ORM1P02763 201 aa11.95□□□□□ -0.5
TSPAN4-208ENST00000409531 HTN1P15515 57 aa11.95□□□□□ -0.5
TSPAN4-208ENST00000409531 RPL23P62829 140 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms