RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CSN1S1P47710 185 aa13.38□□□□□ -0.27
SMARCB1-204ENST00000407422 TCL1AP56279 114 aa13.38□□□□□ -0.27
SMARCB1-204ENST00000407422 KRTAP17-1Q9BYP8 105 aa13.38□□□□□ -0.27
SMARCB1-204ENST00000407422 PCLOQ9Y6V0 5065 aa13.37□□□□□ -0.27
SMARCB1-204ENST00000407422 SPINK4O60575 86 aa13.37□□□□□ -0.27
SMARCB1-204ENST00000407422 TAS2R45P59539 299 aa13.37□□□□□ -0.27
SMARCB1-204ENST00000407422 ESRGQ1W209 222 aa13.37□□□□□ -0.27
SMARCB1-204ENST00000407422 SMUG1Q53HV7 270 aa13.37□□□□□ -0.27
SMARCB1-204ENST00000407422 VSIG2Q96IQ7 327 aa13.37□□□□□ -0.27
SMARCB1-204ENST00000407422 C18orf15Q96N68 181 aa13.37□□□□□ -0.27
SMARCB1-204ENST00000407422 RBAKDNA6NC62 111 aa13.36□□□□□ -0.27
SMARCB1-204ENST00000407422 DIRC3C9JPN6 131 aa13.36□□□□□ -0.27
SMARCB1-204ENST00000407422 H3BNG1 76 aa13.36□□□□□ -0.27
SMARCB1-204ENST00000407422 IBA57Q5T440 356 aaKnown RBP13.36□□□□□ -0.27
SMARCB1-204ENST00000407422 HYLS1Q96M11 299 aa13.36□□□□□ -0.27
SMARCB1-204ENST00000407422 Q9H8V8 135 aa13.36□□□□□ -0.27
SMARCB1-204ENST00000407422 TRBV7-9A0A0J9YWB2 115 aa13.35□□□□□ -0.27
SMARCB1-204ENST00000407422 RAB2AP61019 212 aa13.35□□□□□ -0.27
SMARCB1-204ENST00000407422 MRPL16Q9NX20 251 aaKnown RBP13.35□□□□□ -0.27
SMARCB1-204ENST00000407422 TNP2Q05952 138 aa13.35□□□□□ -0.27
SMARCB1-204ENST00000407422 ZNF266Q14584 549 aa13.35□□□□□ -0.27
SMARCB1-204ENST00000407422 ACOT6Q3I5F7 207 aaPredicted RBP13.35□□□□□ -0.27
SMARCB1-204ENST00000407422 MUC21Q5SSG8 566 aa13.35□□□□□ -0.27
SMARCB1-204ENST00000407422 C6orf223Q8N319 242 aa13.35□□□□□ -0.27
SMARCB1-204ENST00000407422 HMGB3O15347 200 aaKnown RBP13.34□□□□□ -0.27
SMARCB1-204ENST00000407422 RGS21Q2M5E4 152 aa13.34□□□□□ -0.27
SMARCB1-204ENST00000407422 KRTAP1-5Q9BYS1 174 aa13.34□□□□□ -0.27
SMARCB1-204ENST00000407422 A0A096LPF7 62 aa13.33□□□□□ -0.28
SMARCB1-204ENST00000407422 PGPA6NDG6 321 aa13.33□□□□□ -0.28
SMARCB1-204ENST00000407422 IGHV3-53P01767 116 aa13.33□□□□□ -0.28
SMARCB1-204ENST00000407422 OTORQ9NRC9 128 aa13.33□□□□□ -0.28
SMARCB1-204ENST00000407422 RPH3ALQ9UNE2 315 aa13.33□□□□□ -0.28
SMARCB1-204ENST00000407422 A0A1W2PPV4 95 aa13.32□□□□□ -0.28
SMARCB1-204ENST00000407422 PTTG1O95997 202 aa13.32□□□□□ -0.28
SMARCB1-204ENST00000407422 MED14OSP0DP75 135 aa13.32□□□□□ -0.28
SMARCB1-204ENST00000407422 ZNF575Q86XF7 245 aa13.32□□□□□ -0.28
SMARCB1-204ENST00000407422 ST6GAL2Q96JF0 529 aa13.32□□□□□ -0.28
SMARCB1-204ENST00000407422 MDFICQ9P1T7 246 aa13.32□□□□□ -0.28
SMARCB1-204ENST00000407422 PQLC2Q6ZP29 291 aa13.31□□□□□ -0.28
SMARCB1-204ENST00000407422 OR10G4Q8NGN3 311 aa13.31□□□□□ -0.28
SMARCB1-204ENST00000407422 OR10G9Q8NGN4 311 aa13.31□□□□□ -0.28
SMARCB1-204ENST00000407422 OR10G7Q8NGN6 311 aa13.31□□□□□ -0.28
SMARCB1-204ENST00000407422 UPK3BQ9BT76 320 aa13.31□□□□□ -0.28
SMARCB1-204ENST00000407422 RYR1P21817 5038 aa13.31□□□□□ -0.28
SMARCB1-204ENST00000407422 ZNF415Q09FC8 603 aa13.31□□□□□ -0.28
SMARCB1-204ENST00000407422 Q5BKY6 102 aa13.31□□□□□ -0.28
SMARCB1-204ENST00000407422 Q6AWC8 147 aa13.31□□□□□ -0.28
SMARCB1-204ENST00000407422 HSD17B11Q8NBQ5 300 aa13.31□□□□□ -0.28
SMARCB1-204ENST00000407422 CMTM2Q8TAZ6 248 aa13.31□□□□□ -0.28
SMARCB1-204ENST00000407422 MED28Q9H204 178 aa13.31□□□□□ -0.28
SMARCB1-204ENST00000407422 MRPS16Q9Y3D3 137 aaKnown RBP13.31□□□□□ -0.28
SMARCB1-204ENST00000407422 LENEPQ9Y5L5 61 aa13.31□□□□□ -0.28
SMARCB1-204ENST00000407422 LRP1BQ9NZR2 4599 aa13.31□□□□□ -0.28
SMARCB1-204ENST00000407422 GOLT1AQ6ZVE7 132 aa13.3□□□□□ -0.28
SMARCB1-204ENST00000407422 TRAV8-1A0A0A6YYK1 113 aa13.29□□□□□ -0.28
SMARCB1-204ENST00000407422 GNG5P63218 68 aa13.29□□□□□ -0.28
SMARCB1-204ENST00000407422 TMED6Q8WW62 240 aa13.29□□□□□ -0.28
SMARCB1-204ENST00000407422 AQP10Q96PS8 301 aa13.29□□□□□ -0.28
SMARCB1-204ENST00000407422 PAX4O43316 350 aa13.28□□□□□ -0.28
SMARCB1-204ENST00000407422 ARL14EPLP0DKL9 152 aa13.28□□□□□ -0.28
SMARCB1-204ENST00000407422 TMEM183BQ1AE95 376 aa13.28□□□□□ -0.28
SMARCB1-204ENST00000407422 FAM74A1Q5RGS3 127 aa13.28□□□□□ -0.28
SMARCB1-204ENST00000407422 TMEM183AQ8IXX5 376 aa13.28□□□□□ -0.28
SMARCB1-204ENST00000407422 TVP23CQ96ET8 276 aa13.28□□□□□ -0.28
SMARCB1-204ENST00000407422 FHL2Q14192 279 aa13.28□□□□□ -0.28
SMARCB1-204ENST00000407422 FAM159AQ6UWV7 190 aa13.28□□□□□ -0.28
SMARCB1-204ENST00000407422 OR2G3Q8NGZ4 309 aa13.28□□□□□ -0.28
SMARCB1-204ENST00000407422 NAGKQ9UJ70 344 aa13.28□□□□□ -0.28
SMARCB1-204ENST00000407422 HSPG2P98160 4391 aa13.27□□□□□ -0.28
SMARCB1-204ENST00000407422 ATP6V0CP27449 155 aa13.27□□□□□ -0.29
SMARCB1-204ENST00000407422 CDC34P49427 236 aaPredicted RBP13.27□□□□□ -0.29
SMARCB1-204ENST00000407422 C8orf49Q96NF6 230 aa13.27□□□□□ -0.29
SMARCB1-204ENST00000407422 PRO0255Q9UI72 69 aa13.27□□□□□ -0.29
SMARCB1-204ENST00000407422 HHLA3Q9XRX5 114 aa13.27□□□□□ -0.29
SMARCB1-204ENST00000407422 F6UZH7 168 aa13.26□□□□□ -0.29
SMARCB1-204ENST00000407422 STAG3L2P0CL84 134 aa13.26□□□□□ -0.29
SMARCB1-204ENST00000407422 STAG3L3P0CL85 134 aa13.26□□□□□ -0.29
SMARCB1-204ENST00000407422 CRYBA4P53673 196 aa13.26□□□□□ -0.29
SMARCB1-204ENST00000407422 TTC32Q5I0X7 151 aa13.26□□□□□ -0.29
SMARCB1-204ENST00000407422 RAB24Q969Q5 203 aa13.26□□□□□ -0.29
SMARCB1-204ENST00000407422 SGK494Q96LW2 274 aa13.26□□□□□ -0.29
SMARCB1-204ENST00000407422 SH3BGRL3Q9H299 93 aa13.26□□□□□ -0.29
SMARCB1-204ENST00000407422 ICOSQ9Y6W8 199 aa13.26□□□□□ -0.29
SMARCB1-204ENST00000407422 GNRH2O43555 120 aa13.25□□□□□ -0.29
SMARCB1-204ENST00000407422 SFTA3P0C7M3 94 aa13.25□□□□□ -0.29
SMARCB1-204ENST00000407422 SLC7A5P1Q8MH63 180 aa13.25□□□□□ -0.29
SMARCB1-204ENST00000407422 ARL6IP6Q8N6S5 226 aa13.25□□□□□ -0.29
SMARCB1-204ENST00000407422 PSMG3Q9BT73 122 aaPredicted RBP13.25□□□□□ -0.29
SMARCB1-204ENST00000407422 TRGV11A0A075B6L2 103 aa13.24□□□□□ -0.29
SMARCB1-204ENST00000407422 TDRG1Q3Y452 100 aa13.24□□□□□ -0.29
SMARCB1-204ENST00000407422 RASL10AQ92737 203 aa13.24□□□□□ -0.29
SMARCB1-204ENST00000407422 ZNF479Q96JC4 524 aa13.24□□□□□ -0.29
SMARCB1-204ENST00000407422 TREM1Q9NP99 234 aa13.24□□□□□ -0.29
SMARCB1-204ENST00000407422 GIPP09681 153 aaPredicted RBP13.24□□□□□ -0.29
SMARCB1-204ENST00000407422 GCHFRP30047 84 aa13.24□□□□□ -0.29
SMARCB1-204ENST00000407422 SLAQ13239 276 aa13.24□□□□□ -0.29
SMARCB1-204ENST00000407422 SPXQ9BT56 116 aa13.24□□□□□ -0.29
SMARCB1-204ENST00000407422 A0A1W2PPQ1 181 aa13.23□□□□□ -0.29
SMARCB1-204ENST00000407422 SUN5Q8TC36 379 aa13.23□□□□□ -0.29
SMARCB1-204ENST00000407422 DNAH5Q8TE73 4624 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms