RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 SPRNQ5BIV9 151 aa10.55□□□□□ -0.72
CACNA1C-222ENST00000406454 C6orf226Q5I0X4 101 aa10.55□□□□□ -0.72
CACNA1C-222ENST00000406454 ZNF491Q8N8L2 437 aa10.55□□□□□ -0.72
CACNA1C-222ENST00000406454 SPXQ9BT56 116 aa10.55□□□□□ -0.72
CACNA1C-222ENST00000406454 DLEU1O43261 78 aa10.55□□□□□ -0.72
CACNA1C-222ENST00000406454 NDUFS7O75251 213 aa10.55□□□□□ -0.72
CACNA1C-222ENST00000406454 IGHV2-5P01817 119 aa10.55□□□□□ -0.72
CACNA1C-222ENST00000406454 STPG4Q8N801 248 aa10.55□□□□□ -0.72
CACNA1C-222ENST00000406454 TMEM126AQ9H061 195 aa10.55□□□□□ -0.72
CACNA1C-222ENST00000406454 TNCP24821 2201 aa10.54□□□□□ -0.72
CACNA1C-222ENST00000406454 IGLC7A0M8Q6 106 aa10.54□□□□□ -0.72
CACNA1C-222ENST00000406454 MRPL51Q4U2R6 128 aaKnown RBP10.54□□□□□ -0.72
CACNA1C-222ENST00000406454 SLAQ13239 276 aa10.54□□□□□ -0.72
CACNA1C-222ENST00000406454 SEC61GP60059 68 aa10.54□□□□□ -0.72
CACNA1C-222ENST00000406454 HOXB4P17483 251 aaPredicted RBP10.54□□□□□ -0.72
CACNA1C-222ENST00000406454 TCF15Q12870 199 aa10.54□□□□□ -0.72
CACNA1C-222ENST00000406454 LYPD6Q86Y78 171 aa10.54□□□□□ -0.72
CACNA1C-222ENST00000406454 ZC2HC1AQ96GY0 325 aa10.54□□□□□ -0.72
CACNA1C-222ENST00000406454 hADV29S1A0JD25 119 aa10.54□□□□□ -0.72
CACNA1C-222ENST00000406454 KIR3DS1Q14943 382 aa10.54□□□□□ -0.72
CACNA1C-222ENST00000406454 C20orf144Q9BQM9 153 aa10.54□□□□□ -0.72
CACNA1C-222ENST00000406454 VWC2Q2TAL6 325 aa10.53□□□□□ -0.72
CACNA1C-222ENST00000406454 IGHV7-4-1A0A0J9YVY3 117 aa10.53□□□□□ -0.72
CACNA1C-222ENST00000406454 ELANEP08246 267 aa10.53□□□□□ -0.72
CACNA1C-222ENST00000406454 PRSS57Q6UWY2 283 aa10.53□□□□□ -0.72
CACNA1C-222ENST00000406454 LRRK1Q38SD2 2015 aa10.53□□□□□ -0.72
CACNA1C-222ENST00000406454 EREGO14944 169 aa10.53□□□□□ -0.72
CACNA1C-222ENST00000406454 CGB3P0DN86 165 aa10.53□□□□□ -0.72
CACNA1C-222ENST00000406454 CDKN1BP46527 198 aa10.53□□□□□ -0.72
CACNA1C-222ENST00000406454 PRIMA1Q86XR5 153 aa10.53□□□□□ -0.72
CACNA1C-222ENST00000406454 TMEM141Q96I45 108 aa10.52□□□□□ -0.72
CACNA1C-222ENST00000406454 FRMPD3Q5JV73 1810 aa10.52□□□□□ -0.72
CACNA1C-222ENST00000406454 GAGE12JA6NER3 117 aa10.52□□□□□ -0.72
CACNA1C-222ENST00000406454 H3BUA1 57 aa10.52□□□□□ -0.72
CACNA1C-222ENST00000406454 GAGE1Q13065 139 aa10.52□□□□□ -0.72
CACNA1C-222ENST00000406454 GAGE4Q13068 117 aa10.52□□□□□ -0.72
CACNA1C-222ENST00000406454 GAGE5Q13069 117 aa10.52□□□□□ -0.72
CACNA1C-222ENST00000406454 J3QKU1 62 aa10.52□□□□□ -0.73
CACNA1C-222ENST00000406454 SS18Q15532 418 aa10.52□□□□□ -0.73
CACNA1C-222ENST00000406454 TRAV12-2A0A075B6T6 113 aa10.51□□□□□ -0.73
CACNA1C-222ENST00000406454 OR11H6Q8NGC7 330 aa10.51□□□□□ -0.73
CACNA1C-222ENST00000406454 I3L3M4 83 aa10.51□□□□□ -0.73
CACNA1C-222ENST00000406454 SDHAF1A6NFY7 115 aa10.51□□□□□ -0.73
CACNA1C-222ENST00000406454 C3orf56Q8N813 242 aa10.51□□□□□ -0.73
CACNA1C-222ENST00000406454 LYPD6BQ8NI32 183 aa10.51□□□□□ -0.73
CACNA1C-222ENST00000406454 ROS1P08922 2347 aa10.51□□□□□ -0.73
CACNA1C-222ENST00000406454 TRAV26-2A0A0B4J265 109 aa10.51□□□□□ -0.73
CACNA1C-222ENST00000406454 IGHV3-16A0A0C4DH30 117 aa10.51□□□□□ -0.73
CACNA1C-222ENST00000406454 LTAP01374 205 aa10.51□□□□□ -0.73
CACNA1C-222ENST00000406454 C9orf153Q5TBE3 101 aa10.5□□□□□ -0.73
CACNA1C-222ENST00000406454 SPRY4Q9C004 299 aa10.5□□□□□ -0.73
CACNA1C-222ENST00000406454 RBM3P98179 157 aaKnown RBP10.5□□□□□ -0.73
CACNA1C-222ENST00000406454 DLX4Q92988 240 aaPredicted RBP10.5□□□□□ -0.73
CACNA1C-222ENST00000406454 ARHGAP32A7KAX9 2087 aa10.5□□□□□ -0.73
CACNA1C-222ENST00000406454 NDUFS6O75380 124 aaKnown RBP10.5□□□□□ -0.73
CACNA1C-222ENST00000406454 LEPROTO15243 131 aa10.5□□□□□ -0.73
CACNA1C-222ENST00000406454 Q6ZWC4 215 aa10.5□□□□□ -0.73
CACNA1C-222ENST00000406454 IGHV1-24A0A0C4DH33 117 aa10.49□□□□□ -0.73
CACNA1C-222ENST00000406454 NPYP01303 97 aa10.49□□□□□ -0.73
CACNA1C-222ENST00000406454 AZU1P20160 251 aa10.49□□□□□ -0.73
CACNA1C-222ENST00000406454 PMVKQ15126 192 aa10.49□□□□□ -0.73
CACNA1C-222ENST00000406454 C17orf77Q96MU5 243 aa10.49□□□□□ -0.73
CACNA1C-222ENST00000406454 CFHR3Q02985 330 aa10.49□□□□□ -0.73
CACNA1C-222ENST00000406454 A0A1W2PNU3 283 aaPredicted RBP10.49□□□□□ -0.73
CACNA1C-222ENST00000406454 K7EN84 100 aa10.49□□□□□ -0.73
CACNA1C-222ENST00000406454 ASPHD1Q5U4P2 390 aa10.49□□□□□ -0.73
CACNA1C-222ENST00000406454 SIGLEC8Q9NYZ4 499 aa10.49□□□□□ -0.73
CACNA1C-222ENST00000406454 DEFB112Q30KQ8 113 aa10.48□□□□□ -0.73
CACNA1C-222ENST00000406454 PTPRQQ9UMZ3 2332 aa10.48□□□□□ -0.73
CACNA1C-222ENST00000406454 CENPVL3A0A0U1RRI6 287 aa10.48□□□□□ -0.73
CACNA1C-222ENST00000406454 EGR2P11161 476 aaPredicted RBP10.48□□□□□ -0.73
CACNA1C-222ENST00000406454 UBE2V1Q13404 147 aa10.48□□□□□ -0.73
CACNA1C-222ENST00000406454 NEGR1Q7Z3B1 354 aa10.48□□□□□ -0.73
CACNA1C-222ENST00000406454 C2orf82Q6UX34 121 aa10.47□□□□□ -0.73
CACNA1C-222ENST00000406454 TRBV25-1A0A075B6N4 114 aa10.47□□□□□ -0.73
CACNA1C-222ENST00000406454 HLA-DMBP28068 263 aa10.47□□□□□ -0.73
CACNA1C-222ENST00000406454 ZNF124Q15973 351 aa10.47□□□□□ -0.73
CACNA1C-222ENST00000406454 SMIM2Q9BVW6 85 aa10.47□□□□□ -0.73
CACNA1C-222ENST00000406454 GAGE12BA1L429 117 aa10.47□□□□□ -0.73
CACNA1C-222ENST00000406454 GAGE7O76087 117 aa10.47□□□□□ -0.73
CACNA1C-222ENST00000406454 GAGE12FP0CL80 117 aa10.47□□□□□ -0.73
CACNA1C-222ENST00000406454 GAGE12GP0CL81 117 aa10.47□□□□□ -0.73
CACNA1C-222ENST00000406454 GAGE12IP0CL82 117 aa10.47□□□□□ -0.73
CACNA1C-222ENST00000406454 DAD1P61803 113 aa10.47□□□□□ -0.73
CACNA1C-222ENST00000406454 IGHV4-59P01825 116 aa10.47□□□□□ -0.73
CACNA1C-222ENST00000406454 SNHG12Q9BXW3 62 aa10.47□□□□□ -0.73
CACNA1C-222ENST00000406454 LGALS9BQ3B8N2 356 aa10.47□□□□□ -0.73
CACNA1C-222ENST00000406454 LGALS9CQ6DKI2 356 aa10.47□□□□□ -0.73
CACNA1C-222ENST00000406454 ZNRF2Q8NHG8 242 aa10.47□□□□□ -0.73
CACNA1C-222ENST00000406454 ANAPC1Q9H1A4 1944 aa10.46□□□□□ -0.73
CACNA1C-222ENST00000406454 IGLC2P0DOY2 106 aa10.46□□□□□ -0.73
CACNA1C-222ENST00000406454 IGLC3P0DOY3 106 aa10.46□□□□□ -0.73
CACNA1C-222ENST00000406454 VPREB3Q9UKI3 123 aa10.46□□□□□ -0.73
CACNA1C-222ENST00000406454 TRAV25A0A0B4J276 109 aa10.46□□□□□ -0.73
CACNA1C-222ENST00000406454 GAGE6Q13070 117 aa10.46□□□□□ -0.73
CACNA1C-222ENST00000406454 DYNAPQ8N1N2 210 aa10.46□□□□□ -0.73
CACNA1C-222ENST00000406454 NPBQ8NG41 125 aa10.46□□□□□ -0.73
CACNA1C-222ENST00000406454 AGPAT4-IT1Q9H0P7 198 aa10.46□□□□□ -0.73
CACNA1C-222ENST00000406454 IGHV4-61A0A0C4DH41 118 aa10.46□□□□□ -0.74
CACNA1C-222ENST00000406454 MED13Q9UHV7 2174 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms