RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 C9orf139Q6ZV77 190 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 RNF152Q8N8N0 203 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 OR2K2Q8NGT1 345 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 LINC00477Q96M19 166 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 METTL26Q96S19 204 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 ABCA2Q9BZC7 2435 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 TRAV41A0A0B4J266 112 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 IGHV1-69DA0A0B4J2H0 117 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 A6NDX4 124 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 C19orf84I3L1E1 186 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 M0R381 172 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 IGHV1-69P01742 117 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 IGHG2P01859 326 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 TRGV3P03979 118 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 ATP5G2Q06055 141 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 OR8A1Q8NGG7 326 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 PEF1Q9UBV8 284 aaKnown RBP2.93□□□□□ -1.94
RTN4-209ENST00000405240 ATP5LO75964 103 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 IGHV4-39P01824 125 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 SLC25A16P16260 332 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 LEPP41159 167 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 USMG5Q96IX5 58 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 JMJD8Q96S16 334 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 TM2D2Q9BX73 214 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 BPESC1Q9GZL8 116 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 KIF25-AS1Q9Y6Z4 181 aa2.93□□□□□ -1.94
RTN4-209ENST00000405240 IGKV2D-26A0A0A0MRZ7 120 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 A1L4Q6 167 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 OVOL1O14753 267 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 ORM1P02763 201 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 GATA1P15976 413 aaPredicted RBP2.92□□□□□ -1.94
RTN4-209ENST00000405240 ECSCRQ19T08 205 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 AMMECR1LQ6DCA0 310 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 Q6ZQT7 251 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 PCP2Q8IVA1 136 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 C20orf78Q9BR46 151 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 TPPP3Q9BW30 176 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 COL25A1Q9BXS0 654 aaPredicted RBP2.92□□□□□ -1.94
RTN4-209ENST00000405240 URB1O60287 2271 aaKnown RBP2.92□□□□□ -1.94
RTN4-209ENST00000405240 A0A087WX48 190 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 FXYD7P58549 80 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 LINC00315P59091 139 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 LAGE3Q14657 143 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 TAL2Q16559 108 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 TOMM6Q96B49 74 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 VPS13CQ709C8 3753 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 TACC2O95359 2948 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 PKDREJQ9NTG1 2253 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 EP300Q09472 2414 aaPredicted RBP2.92□□□□□ -1.94
RTN4-209ENST00000405240 A0A1B0GWB2 263 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 KLLNB2CW77 178 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 K7EMT4 169 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 NDUFS8O00217 210 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 IGKCP01834 107 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 NHLH1Q02575 133 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 TMEM78Q5T7P6 136 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 NEGR1Q7Z3B1 354 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 C10orf105Q8TEF2 133 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 TMEM158Q8WZ71 300 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 RASL10AQ92737 203 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 CST9LQ9H4G1 147 aa2.92□□□□□ -1.94
RTN4-209ENST00000405240 PCNX1Q96RV3 2341 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 IGHV4OR15-8A0A075B7B6 117 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 A0A087WW49 117 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 A6NDN8 102 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 K7EP34 96 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 SMIM17P0DL12 118 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 UNQ9165/PRO28630Q6UXU0 137 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 NEXN-AS1Q8NBZ9 246 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 RELNP78509 3460 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 PTPRQQ9UMZ3 2332 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 IGHV3OR16-8A0A075B7F1 116 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 TRBV12-3P01733 135 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 RNASE3P12724 160 aaKnown RBP2.91□□□□□ -1.94
RTN4-209ENST00000405240 ARL3P36405 182 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 OCIAD2Q56VL3 154 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 OR4C5Q8NGB2 326 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 ODF3Q96PU9 254 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 UBTD1Q9HAC8 227 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 TMEM89A2RUT3 159 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 H0Y8G0 127 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 DPM2O94777 84 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 VAMP3Q15836 100 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 SPOCK3Q9BQ16 436 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 SMIM2Q9BVW6 85 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 MUC4Q99102 2169 aa2.91□□□□□ -1.94
RTN4-209ENST00000405240 CNOT1A5YKK6 2376 aaKnown RBP2.9□□□□□ -1.94
RTN4-209ENST00000405240 TRBV25-1A0A075B6N4 114 aa2.9□□□□□ -1.94
RTN4-209ENST00000405240 TRAV21A0A0B4J279 112 aa2.9□□□□□ -1.94
RTN4-209ENST00000405240 IGHV3-35A0A0C4DH35 117 aa2.9□□□□□ -1.94
RTN4-209ENST00000405240 IGHV3-66A0A0C4DH42 116 aa2.9□□□□□ -1.94
RTN4-209ENST00000405240 A0A1W2PPM0 123 aa2.9□□□□□ -1.94
RTN4-209ENST00000405240 TMEM8BA6NDV4 472 aa2.9□□□□□ -1.94
RTN4-209ENST00000405240 LCNL1Q6ZST4 164 aa2.9□□□□□ -1.94
RTN4-209ENST00000405240 MAPKAPK5-AS1Q8N8E1 139 aa2.9□□□□□ -1.94
RTN4-209ENST00000405240 TRBV7-3A0A075B6L6 115 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 A0A096LNT2 108 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 IGHV4-61A0A0C4DH41 118 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 GAGE12BA1L429 117 aa2.9□□□□□ -1.95
RTN4-209ENST00000405240 PLNP26678 52 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms