RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 TREM1Q9NP99 234 aa21.23■□□□□ 0.99
USP42-202ENST00000404008 RBFOX3A6NFN3 312 aa21.22■□□□□ 0.99
USP42-202ENST00000404008 AKR1C3P42330 323 aa21.22■□□□□ 0.99
USP42-202ENST00000404008 IFITM2Q01629 132 aa21.22■□□□□ 0.99
USP42-202ENST00000404008 Q86TA4 180 aa21.22■□□□□ 0.99
USP42-202ENST00000404008 PDE6DO43924 150 aa21.21■□□□□ 0.99
USP42-202ENST00000404008 MIFP14174 115 aa21.21■□□□□ 0.99
USP42-202ENST00000404008 UBE2G1P62253 170 aa21.21■□□□□ 0.99
USP42-202ENST00000404008 TMEM183BQ1AE95 376 aa21.21■□□□□ 0.99
USP42-202ENST00000404008 Q8NAQ8 132 aa21.21■□□□□ 0.99
USP42-202ENST00000404008 NIPSNAP3BQ9BS92 247 aa21.21■□□□□ 0.99
USP42-202ENST00000404008 TRBV6-1A0A0K0K1D8 114 aa21.2■□□□□ 0.98
USP42-202ENST00000404008 ZNF324O75467 553 aaPredicted RBP21.2■□□□□ 0.98
USP42-202ENST00000404008 ZNF767PQ75MW2 155 aa21.2■□□□□ 0.98
USP42-202ENST00000404008 LINC01587Q99440 93 aa21.2■□□□□ 0.98
USP42-202ENST00000404008 SMIM9A6NGZ8 99 aa21.19■□□□□ 0.98
USP42-202ENST00000404008 H7BYZ3 331 aa21.19■□□□□ 0.98
USP42-202ENST00000404008 ZNF506Q5JVG8 444 aa21.19■□□□□ 0.98
USP42-202ENST00000404008 SAPCD1Q5SSQ6 148 aa21.19■□□□□ 0.98
USP42-202ENST00000404008 C8orf49Q96NF6 230 aa21.19■□□□□ 0.98
USP42-202ENST00000404008 S100A9P06702 114 aaKnown RBP21.18■□□□□ 0.98
USP42-202ENST00000404008 FAM210AQ96ND0 272 aa21.18■□□□□ 0.98
USP42-202ENST00000404008 IGHV4-28A0A0C4DH34 117 aa21.17■□□□□ 0.98
USP42-202ENST00000404008 Q6AWC8 147 aa21.17■□□□□ 0.98
USP42-202ENST00000404008 Q6ZQT7 251 aa21.17■□□□□ 0.98
USP42-202ENST00000404008 TAS2R60P59551 318 aa21.16■□□□□ 0.98
USP42-202ENST00000404008 TOR2AQ5JU69 321 aa21.16■□□□□ 0.98
USP42-202ENST00000404008 C11orf68Q9H3H3 251 aaKnown RBP21.16■□□□□ 0.98
USP42-202ENST00000404008 ZFP30Q9Y2G7 519 aa21.16■□□□□ 0.98
USP42-202ENST00000404008 A0A0J9YWU9 116 aa21.15■□□□□ 0.98
USP42-202ENST00000404008 ZNF705GA8MUZ8 300 aaPredicted RBP21.15■□□□□ 0.98
USP42-202ENST00000404008 LTAP01374 205 aa21.15■□□□□ 0.98
USP42-202ENST00000404008 PRM2P04554 102 aa21.15■□□□□ 0.98
USP42-202ENST00000404008 RRN3P1Q2M238 152 aa21.15■□□□□ 0.98
USP42-202ENST00000404008 DERL1Q9BUN8 251 aa21.15■□□□□ 0.98
USP42-202ENST00000404008 EDA2RQ9HAV5 297 aa21.15■□□□□ 0.98
USP42-202ENST00000404008 RPL35P42766 123 aaKnown RBP21.14■□□□□ 0.98
USP42-202ENST00000404008 RAB14P61106 215 aa21.14■□□□□ 0.98
USP42-202ENST00000404008 PYGO2Q9BRQ0 406 aa21.14■□□□□ 0.98
USP42-202ENST00000404008 EIF5A2Q9GZV4 153 aaKnown RBP21.14■□□□□ 0.98
USP42-202ENST00000404008 DEFB4AO15263 64 aa21.13■□□□□ 0.97
USP42-202ENST00000404008 SMUG1Q53HV7 270 aa21.13■□□□□ 0.97
USP42-202ENST00000404008 GCGP01275 180 aa21.12■□□□□ 0.97
USP42-202ENST00000404008 HTN1P15515 57 aa21.12■□□□□ 0.97
USP42-202ENST00000404008 ZNF80P51504 273 aaPredicted RBP21.12■□□□□ 0.97
USP42-202ENST00000404008 MED9Q9NWA0 146 aa21.12■□□□□ 0.97
USP42-202ENST00000404008 COX8CQ7Z4L0 72 aa21.11■□□□□ 0.97
USP42-202ENST00000404008 LINC00467Q9BRT7 94 aa21.11■□□□□ 0.97
USP42-202ENST00000404008 TRAV21A0A0B4J279 112 aa21.1■□□□□ 0.97
USP42-202ENST00000404008 AZU1P20160 251 aa21.1■□□□□ 0.97
USP42-202ENST00000404008 DNAH7Q8WXX0 4024 aa21.1■□□□□ 0.97
USP42-202ENST00000404008 TMEM250H0YL14 139 aa21.1■□□□□ 0.97
USP42-202ENST00000404008 NDUFS6O75380 124 aaKnown RBP21.1■□□□□ 0.97
USP42-202ENST00000404008 CLLU1Q5K131 121 aa21.1■□□□□ 0.97
USP42-202ENST00000404008 TMEM183AQ8IXX5 376 aa21.1■□□□□ 0.97
USP42-202ENST00000404008 ZC2HC1AQ96GY0 325 aa21.1■□□□□ 0.97
USP42-202ENST00000404008 RGS13O14921 159 aa21.09■□□□□ 0.97
USP42-202ENST00000404008 IGHV1OR15-1A0A075B7D0 117 aa21.08■□□□□ 0.96
USP42-202ENST00000404008 TMEM189A5PLL7 270 aa21.08■□□□□ 0.96
USP42-202ENST00000404008 PFN1P07737 140 aaKnown RBP21.08■□□□□ 0.96
USP42-202ENST00000404008 BAGE2Q86Y30 109 aa21.08■□□□□ 0.96
USP42-202ENST00000404008 EIF4E3Q8N5X7 224 aaKnown RBP21.08■□□□□ 0.96
USP42-202ENST00000404008 NHLRC2Q8NBF2 726 aa21.08■□□□□ 0.96
USP42-202ENST00000404008 RNASE8Q8TDE3 154 aaKnown RBP21.08■□□□□ 0.96
USP42-202ENST00000404008 TMEM263Q8WUH6 116 aaKnown RBP21.08■□□□□ 0.96
USP42-202ENST00000404008 MLST8Q9BVC4 326 aa21.08■□□□□ 0.96
USP42-202ENST00000404008 CENPWQ5EE01 88 aa21.07■□□□□ 0.96
USP42-202ENST00000404008 C16orf74Q96GX8 76 aa21.07■□□□□ 0.96
USP42-202ENST00000404008 RAB19A4D1S5 217 aa21.06■□□□□ 0.96
USP42-202ENST00000404008 MUC21Q5SSG8 566 aa21.06■□□□□ 0.96
USP42-202ENST00000404008 PLAC8L1A1L4L8 177 aa21.05■□□□□ 0.96
USP42-202ENST00000404008 CBY3A6NI87 242 aa21.05■□□□□ 0.96
USP42-202ENST00000404008 EMP1P54849 157 aa21.05■□□□□ 0.96
USP42-202ENST00000404008 ANXA2RQ3ZCQ2 193 aa21.05■□□□□ 0.96
USP42-202ENST00000404008 FAM159AQ6UWV7 190 aa21.05■□□□□ 0.96
USP42-202ENST00000404008 ZNF493Q6ZR52 646 aa21.05■□□□□ 0.96
USP42-202ENST00000404008 CRIP1P50238 77 aa21.04■□□□□ 0.96
USP42-202ENST00000404008 TDRG1Q3Y452 100 aa21.04■□□□□ 0.96
USP42-202ENST00000404008 NAGKQ9UJ70 344 aa21.04■□□□□ 0.96
USP42-202ENST00000404008 TRBV20OR9-2A0A075B6H5 130 aa21.03■□□□□ 0.96
USP42-202ENST00000404008 SRP19P09132 144 aaKnown RBP21.03■□□□□ 0.96
USP42-202ENST00000404008 GNG4P50150 75 aa21.03■□□□□ 0.96
USP42-202ENST00000404008 WWC2-AS2Q96NR7 200 aa21.03■□□□□ 0.96
USP42-202ENST00000404008 PARLQ9H300 379 aa21.03■□□□□ 0.96
USP42-202ENST00000404008 C11orf21Q9P2W6 132 aa21.03■□□□□ 0.96
USP42-202ENST00000404008 TP53TG3Q9ULZ0 132 aa21.03■□□□□ 0.96
USP42-202ENST00000404008 FABP5P3A8MUU1 101 aa21.02■□□□□ 0.96
USP42-202ENST00000404008 SRSF3P84103 164 aaKnown RBP21.02■□□□□ 0.96
USP42-202ENST00000404008 FAM162BQ5T6X4 162 aa21.02■□□□□ 0.96
USP42-202ENST00000404008 IGLV2-8P01709 118 aa21.01■□□□□ 0.95
USP42-202ENST00000404008 PEA15Q15121 130 aa21.01■□□□□ 0.95
USP42-202ENST00000404008 ZNF674Q2M3X9 581 aa21.01■□□□□ 0.95
USP42-202ENST00000404008 SMIM12Q96EX1 92 aa21.01■□□□□ 0.95
USP42-202ENST00000404008 SMDT1Q9H4I9 107 aa21.01■□□□□ 0.95
USP42-202ENST00000404008 SH2D1AO60880 128 aa21■□□□□ 0.95
USP42-202ENST00000404008 CEBPGP53567 150 aa21■□□□□ 0.95
USP42-202ENST00000404008 C11orf72Q8NBR9 251 aa21■□□□□ 0.95
USP42-202ENST00000404008 IL17DQ8TAD2 202 aa21■□□□□ 0.95
USP42-202ENST00000404008 CELA1Q9UNI1 258 aa21■□□□□ 0.95
USP42-202ENST00000404008 C9JQL5 133 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms