RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 IGKV3-7A0A075B6H7 116 aa1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 IFITM5A6NNB3 132 aa1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 BBIP1A8MTZ0 92 aa1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 M0R2N4 97 aa1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 GEMIN2O14893 280 aaKnown RBP1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 CCL25O15444 150 aa1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 LINC00694P0DN24 101 aa1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 IL9P15248 144 aa1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 DNAJB13P59910 316 aa1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 SPRNQ5BIV9 151 aa1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 CLLU1Q5K131 121 aa1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 C10orf111Q8N326 155 aa1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 C5orf17Q8NAS9 161 aa1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 RP1L1Q8IWN7 2480 aaPredicted RBP1.23□□□□□ -2.21
HMGB1P17-201ENST00000403495 MYO5AQ9Y4I1 1855 aaKnown RBP1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 FAM236AA0A1B0GUQ0 79 aa1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 FAM236BA0A1B0GV22 79 aa1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 EFCAB10A6NFE3 127 aa1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 SULT1C4O75897 302 aa1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 NCR2O95944 276 aa1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 PPYP01298 95 aa1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 ZNF25P17030 456 aaPredicted RBP1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 COPZ1P61923 177 aa1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 RPS25P62851 125 aaKnown RBP1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 CCSMST1Q4G0I0 132 aa1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 GDF5OSQ5U4N7 250 aa1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 IZUMO2Q6UXV1 221 aa1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 LINC00322Q6ZN03 302 aaPredicted RBP1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 OR10AC1Q8NH08 325 aa1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 TMEM14CQ9P0S9 112 aa1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 ERG28Q9UKR5 140 aa1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 ZFP30Q9Y2G7 519 aa1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 HEATR5BQ9P2D3 2071 aa1.22□□□□□ -2.21
HMGB1P17-201ENST00000403495 ADGRB2O60241 1585 aa1.21□□□□□ -2.22
HMGB1P17-201ENST00000403495 USP54Q70EL1 1684 aa1.21□□□□□ -2.22
HMGB1P17-201ENST00000403495 IGLV3-32A0A0A0MS00 114 aa1.21□□□□□ -2.22
HMGB1P17-201ENST00000403495 NPFFO15130 113 aa1.21□□□□□ -2.22
HMGB1P17-201ENST00000403495 YPEL1O60688 119 aa1.21□□□□□ -2.22
HMGB1P17-201ENST00000403495 KLF7O75840 302 aaPredicted RBP1.21□□□□□ -2.22
HMGB1P17-201ENST00000403495 IGHV3-33P01772 117 aa1.21□□□□□ -2.22
HMGB1P17-201ENST00000403495 KRTAP10-4P60372 401 aaPredicted RBP1.21□□□□□ -2.22
HMGB1P17-201ENST00000403495 PLGLB1Q02325 96 aa1.21□□□□□ -2.22
HMGB1P17-201ENST00000403495 LINC00299Q6ZSB3 139 aa1.21□□□□□ -2.22
HMGB1P17-201ENST00000403495 TCTEX1D1Q8N7M0 179 aa1.21□□□□□ -2.22
HMGB1P17-201ENST00000403495 OBSCN-AS1Q96MR7 158 aa1.21□□□□□ -2.22
HMGB1P17-201ENST00000403495 WFDC10AQ9H1F0 79 aa1.21□□□□□ -2.22
HMGB1P17-201ENST00000403495 LSM2Q9Y333 95 aaKnown RBP1.21□□□□□ -2.22
HMGB1P17-201ENST00000403495 XIRP1Q702N8 1843 aaKnown RBP1.21□□□□□ -2.22
HMGB1P17-201ENST00000403495 FER1L6Q2WGJ9 1857 aa1.2□□□□□ -2.22
HMGB1P17-201ENST00000403495 A6NN06 94 aa1.2□□□□□ -2.22
HMGB1P17-201ENST00000403495 ZNF670-ZNF695F2Z2N8 137 aa1.2□□□□□ -2.22
HMGB1P17-201ENST00000403495 JMJD7-PLA2G4BH0Y9G9 81 aa1.2□□□□□ -2.22
HMGB1P17-201ENST00000403495 K7EP13 123 aa1.2□□□□□ -2.22
HMGB1P17-201ENST00000403495 CDC42EP2O14613 210 aa1.2□□□□□ -2.22
HMGB1P17-201ENST00000403495 ADCYAP1P18509 176 aa1.2□□□□□ -2.22
HMGB1P17-201ENST00000403495 C3orf62Q6ZUJ4 267 aa1.2□□□□□ -2.22
HMGB1P17-201ENST00000403495 ERBINQ96RT1 1412 aa1.2□□□□□ -2.22
HMGB1P17-201ENST00000403495 ANAPC1Q9H1A4 1944 aa1.2□□□□□ -2.22
HMGB1P17-201ENST00000403495 INTS1Q8N201 2190 aaKnown RBP1.2□□□□□ -2.22
HMGB1P17-201ENST00000403495 LAMB2P55268 1798 aa1.19□□□□□ -2.22
HMGB1P17-201ENST00000403495 TRBV20-1A0A075B6N2 111 aa1.19□□□□□ -2.22
HMGB1P17-201ENST00000403495 A0A1W2PPB8 328 aa1.19□□□□□ -2.22
HMGB1P17-201ENST00000403495 A0A1W2PRS3 328 aa1.19□□□□□ -2.22
HMGB1P17-201ENST00000403495 KIR3DP1A8MWS1 328 aa1.19□□□□□ -2.22
HMGB1P17-201ENST00000403495 M0R129 80 aa1.19□□□□□ -2.22
HMGB1P17-201ENST00000403495 KRTAP21-3Q3LHN1 58 aa1.19□□□□□ -2.22
HMGB1P17-201ENST00000403495 IDO2Q6ZQW0 420 aa1.19□□□□□ -2.22
HMGB1P17-201ENST00000403495 SNX29P2Q8IUI4 249 aa1.19□□□□□ -2.22
HMGB1P17-201ENST00000403495 ATOH7Q8N100 152 aa1.19□□□□□ -2.22
HMGB1P17-201ENST00000403495 PLPP5Q8NEB5 264 aa1.19□□□□□ -2.22
HMGB1P17-201ENST00000403495 ARL11Q969Q4 196 aa1.19□□□□□ -2.22
HMGB1P17-201ENST00000403495 LINC00526Q96FQ7 95 aa1.19□□□□□ -2.22
HMGB1P17-201ENST00000403495 MRPL57Q9BQC6 102 aaKnown RBP1.19□□□□□ -2.22
HMGB1P17-201ENST00000403495 LIMD2Q9BT23 127 aa1.19□□□□□ -2.22
HMGB1P17-201ENST00000403495 HELZ2Q9BYK8 2649 aaKnown RBP1.19□□□□□ -2.22
HMGB1P17-201ENST00000403495 WDR97A6NE52 1622 aa1.18□□□□□ -2.22
HMGB1P17-201ENST00000403495 ERCC6Q03468 1493 aa1.18□□□□□ -2.22
HMGB1P17-201ENST00000403495 ARFGEF3Q5TH69 2177 aa1.18□□□□□ -2.22
HMGB1P17-201ENST00000403495 TRAV23DV6A0A075B6W5 121 aa1.18□□□□□ -2.22
HMGB1P17-201ENST00000403495 A0A0J9YY99 117 aa1.18□□□□□ -2.22
HMGB1P17-201ENST00000403495 M0R2P5 195 aa1.18□□□□□ -2.22
HMGB1P17-201ENST00000403495 TPST1O60507 370 aa1.18□□□□□ -2.22
HMGB1P17-201ENST00000403495 ANGP03950 147 aaKnown RBP1.18□□□□□ -2.22
HMGB1P17-201ENST00000403495 SELENOWP63302 87 aa1.18□□□□□ -2.22
HMGB1P17-201ENST00000403495 RPL13AP3Q6NVV1 102 aa1.18□□□□□ -2.22
HMGB1P17-201ENST00000403495 ATP6V0E2Q8NHE4 81 aa1.18□□□□□ -2.22
HMGB1P17-201ENST00000403495 C1orf54Q8WWF1 131 aa1.18□□□□□ -2.22
HMGB1P17-201ENST00000403495 NOP16Q9Y3C1 178 aaKnown RBP1.18□□□□□ -2.22
HMGB1P17-201ENST00000403495 MED12LQ86YW9 2145 aa1.18□□□□□ -2.22
HMGB1P17-201ENST00000403495 UHRF1BP1LA0JNW5 1464 aa1.18□□□□□ -2.22
HMGB1P17-201ENST00000403495 SCN8AQ9UQD0 1980 aa1.17□□□□□ -2.22
HMGB1P17-201ENST00000403495 DIDO1Q9BTC0 2240 aaKnown RBP1.17□□□□□ -2.22
HMGB1P17-201ENST00000403495 J3QLW9 94 aa1.17□□□□□ -2.22
HMGB1P17-201ENST00000403495 IL7P13232 177 aa1.17□□□□□ -2.22
HMGB1P17-201ENST00000403495 RRAS2P62070 204 aaPredicted RBP1.17□□□□□ -2.22
HMGB1P17-201ENST00000403495 SPATA45Q537H7 98 aa1.17□□□□□ -2.22
HMGB1P17-201ENST00000403495 CSAG1Q6PB30 78 aa1.17□□□□□ -2.22
HMGB1P17-201ENST00000403495 ATP11AUNQ6ZP68 121 aa1.17□□□□□ -2.22
HMGB1P17-201ENST00000403495 LINC00470Q9BZP3 86 aa1.17□□□□□ -2.22
HMGB1P17-201ENST00000403495 TMEM191AQ9H0A3 160 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms