RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	AKAIN1	P0CW23	69 aa		4.61	□□□□□ -1.67
CEACAM1-208	ENST00000403461	CXCL3	P19876	107 aa		4.61	□□□□□ -1.67
CEACAM1-208	ENST00000403461	NCS1	P62166	190 aa		4.61	□□□□□ -1.67
CEACAM1-208	ENST00000403461	FAAP20	Q6NZ36	180 aa		4.61	□□□□□ -1.67
CEACAM1-208	ENST00000403461	RPUSD4	Q96CM3	377 aa	Known RBP	4.61	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SHANK2-AS3	Q9BTD1	123 aa		4.61	□□□□□ -1.67
CEACAM1-208	ENST00000403461	HIGD1A	Q9Y241	93 aa		4.61	□□□□□ -1.67
CEACAM1-208	ENST00000403461		A0A087X0K7	114 aa		4.6	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SMCO3	A2RU48	225 aa		4.6	□□□□□ -1.67
CEACAM1-208	ENST00000403461	PMS2P5	A8MQ11	134 aa		4.6	□□□□□ -1.67
CEACAM1-208	ENST00000403461	RGS5	O15539	181 aa		4.6	□□□□□ -1.67
CEACAM1-208	ENST00000403461	OR5G3	P0C626	314 aa		4.6	□□□□□ -1.67
CEACAM1-208	ENST00000403461	IAPP	P10997	89 aa		4.6	□□□□□ -1.67
CEACAM1-208	ENST00000403461	CXCL2	P19875	107 aa		4.6	□□□□□ -1.67
CEACAM1-208	ENST00000403461	PSG3	Q16557	428 aa		4.6	□□□□□ -1.67
CEACAM1-208	ENST00000403461	LYZL2	Q7Z4W2	148 aa		4.6	□□□□□ -1.67
CEACAM1-208	ENST00000403461	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.6	□□□□□ -1.67
CEACAM1-208	ENST00000403461	LINC00612	Q8N6U2	182 aa		4.6	□□□□□ -1.67
CEACAM1-208	ENST00000403461	ZNF680	Q8NEM1	530 aa		4.6	□□□□□ -1.67
CEACAM1-208	ENST00000403461	OR51S1	Q8NGJ8	323 aa		4.6	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SLC50A1	Q9BRV3	221 aa		4.6	□□□□□ -1.67
CEACAM1-208	ENST00000403461	MCUB	Q9NWR8	336 aa		4.6	□□□□□ -1.67
CEACAM1-208	ENST00000403461	IGKV1OR2-108	A0A075B7D4	117 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461		A0A087WTM6	91 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461		K7EP13	123 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461	PRAF2	O60831	178 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461	NXPH4	O95158	308 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461	LINC00869	P0C866	280 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461	STAG3L2	P0CL84	134 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SMIM18	P0DKX4	95 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461	GATA2	P23769	480 aa	Predicted RBP	4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461	LEP	P41159	167 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461	XG	P55808	180 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SELENOT	P62341	195 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461	S100A12	P80511	92 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SPANXN5	Q5MJ07	72 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461	LCN15	Q6UWW0	184 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461		Q6ZRN7	208 aa	Predicted RBP	4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461	CYP2G1P	Q6ZSU1	146 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461	SMIM4	Q8WVI0	70 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461	PYGO2	Q9BRQ0	406 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461	FUNDC2	Q9BWH2	189 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461	ICOS	Q9Y6W8	199 aa		4.59	□□□□□ -1.67
CEACAM1-208	ENST00000403461		A0A096LPF7	62 aa		4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	TRGV1	A0A0A0MS02	117 aa		4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	PCP4L1	A6NKN8	68 aa		4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	SYNGR2	O43760	224 aa		4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	SLC25A6	P12236	298 aa		4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	EVI2A	P22794	236 aa		4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	FAU	P35544	74 aa	Known RBP	4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	DAZ2	Q13117	558 aa	Known RBP	4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	SLA	Q13239	276 aa		4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	GFI1B	Q5VTD9	330 aa		4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	PRR27	Q6MZM9	219 aa		4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	FAM159A	Q6UWV7	190 aa		4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	ACOT7L	Q6ZUV0	252 aa		4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	TMED4	Q7Z7H5	227 aa		4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	AKAP14	Q86UN6	197 aa		4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	NAA50	Q9GZZ1	169 aa	Known RBP	4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	MDFIC	Q9P1T7	246 aa		4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	PXMP4	Q9Y6I8	212 aa		4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461	LY96	Q9Y6Y9	160 aa		4.58	□□□□□ -1.68
CEACAM1-208	ENST00000403461		H3BP45	60 aa		4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	PSCA	O43653	123 aa		4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	PITX3	O75364	302 aa		4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	SMR3B	P02814	79 aa	Predicted RBP	4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	S100A1	P23297	94 aa		4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	FUS	P35637	526 aa	Known RBP eCLIP	4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	PLP1	P60201	277 aa		4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	KRTAP10-1	P60331	282 aa		4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461		Q6ZTI0	123 aa		4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	BPIFA4P	Q86YQ2	179 aa		4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	C10orf126	Q8N4M7	172 aa		4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	PCNP	Q8WW12	178 aa	Known RBP	4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	VSIG2	Q96IQ7	327 aa		4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	ODF3	Q96PU9	254 aa		4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	TMEM70	Q9BUB7	260 aa		4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	MRPS26	Q9BYN8	205 aa	Known RBP	4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	ARL6	Q9H0F7	186 aa		4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	DNAJC4	Q9NNZ3	241 aa		4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	RSL24D1	Q9UHA3	163 aa	Known RBP	4.57	□□□□□ -1.68
CEACAM1-208	ENST00000403461	TRAV12-3	A0A0B4J271	114 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	PRSS46	E5RG02	174 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	COX7A2P2	O60397	106 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	MB	P02144	154 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	DNAH10OS	P0CZ25	163 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	SRI	P30626	198 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	PPT1	P50897	306 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	BCAP31	P51572	246 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	AP3S2	P59780	193 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	RAB14	P61106	215 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	MRPL23	Q16540	153 aa	Known RBP	4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	TMEM128	Q5BJH2	165 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	SAPCD1	Q5SSQ6	148 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	NEGR1	Q7Z3B1	354 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	ZNF546	Q86UE3	836 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	DIRAS2	Q96HU8	199 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	LINC00467	Q9BRT7	94 aa		4.56	□□□□□ -1.68
CEACAM1-208	ENST00000403461	ARV1	Q9H2C2	271 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms