RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 MTORP42345 2549 aa12.29□□□□□ -0.44
CHRFAM7A-203ENST00000401522 IGKV2-40A0A087WW87 121 aaPredicted RBP12.29□□□□□ -0.44
CHRFAM7A-203ENST00000401522 hDV102S1A0JD36 115 aa12.29□□□□□ -0.44
CHRFAM7A-203ENST00000401522 H3BUX3 64 aa12.29□□□□□ -0.44
CHRFAM7A-203ENST00000401522 IGKV2D-40P01614 121 aaPredicted RBP12.29□□□□□ -0.44
CHRFAM7A-203ENST00000401522 IGHV3-23P01764 117 aa12.28□□□□□ -0.44
CHRFAM7A-203ENST00000401522 IGHV4-59P01825 116 aa12.28□□□□□ -0.44
CHRFAM7A-203ENST00000401522 BMI1P35226 326 aa12.28□□□□□ -0.44
CHRFAM7A-203ENST00000401522 FAM104BQ5XKR9 115 aa12.28□□□□□ -0.44
CHRFAM7A-203ENST00000401522 SLC25A34Q6PIV7 304 aa12.28□□□□□ -0.44
CHRFAM7A-203ENST00000401522 Q8N9W7 124 aa12.28□□□□□ -0.44
CHRFAM7A-203ENST00000401522 FAM110DQ8TAY7 271 aaPredicted RBP12.28□□□□□ -0.44
CHRFAM7A-203ENST00000401522 PRB4P10163 310 aaPredicted RBP12.27□□□□□ -0.44
CHRFAM7A-203ENST00000401522 SRSF2Q01130 221 aaKnown RBP12.27□□□□□ -0.44
CHRFAM7A-203ENST00000401522 KLK9Q2XQG4 91 aa12.27□□□□□ -0.44
CHRFAM7A-203ENST00000401522 ZNF747Q9BV97 191 aa12.27□□□□□ -0.44
CHRFAM7A-203ENST00000401522 KLK9Q9UKQ9 250 aa12.27□□□□□ -0.44
CHRFAM7A-203ENST00000401522 SMAD5-AS1Q9Y6J3 95 aa12.27□□□□□ -0.44
CHRFAM7A-203ENST00000401522 TMSB15BA0A087X1C1 80 aa12.27□□□□□ -0.45
CHRFAM7A-203ENST00000401522 HOXA3O43365 443 aaPredicted RBP12.27□□□□□ -0.45
CHRFAM7A-203ENST00000401522 RAB9AP51151 201 aa12.27□□□□□ -0.45
CHRFAM7A-203ENST00000401522 ORMDL3Q8N138 153 aa12.27□□□□□ -0.45
CHRFAM7A-203ENST00000401522 SCRT2Q9NQ03 307 aa12.27□□□□□ -0.45
CHRFAM7A-203ENST00000401522 COX11Q9Y6N1 276 aa12.27□□□□□ -0.45
CHRFAM7A-203ENST00000401522 FN1P02751 2386 aaKnown RBP12.26□□□□□ -0.45
CHRFAM7A-203ENST00000401522 A6NDX4 124 aa12.26□□□□□ -0.45
CHRFAM7A-203ENST00000401522 D6R8Y8 96 aa12.26□□□□□ -0.45
CHRFAM7A-203ENST00000401522 TMEM86BQ8N661 226 aa12.26□□□□□ -0.45
CHRFAM7A-203ENST00000401522 ZNF738Q8NE65 137 aa12.26□□□□□ -0.45
CHRFAM7A-203ENST00000401522 PRELID3AQ96N28 172 aa12.26□□□□□ -0.45
CHRFAM7A-203ENST00000401522 TMEM213A2RRL7 107 aa12.25□□□□□ -0.45
CHRFAM7A-203ENST00000401522 ZNF502Q8TBZ5 544 aa12.25□□□□□ -0.45
CHRFAM7A-203ENST00000401522 A0A087X0K7 114 aa12.25□□□□□ -0.45
CHRFAM7A-203ENST00000401522 IGHG4P01861 327 aa12.25□□□□□ -0.45
CHRFAM7A-203ENST00000401522 IFI27P40305 119 aaPredicted RBP12.25□□□□□ -0.45
CHRFAM7A-203ENST00000401522 UNQ5815/PRO19632Q6UWF5 114 aa12.25□□□□□ -0.45
CHRFAM7A-203ENST00000401522 FER1L6-AS1Q8NA97 138 aa12.25□□□□□ -0.45
CHRFAM7A-203ENST00000401522 VGLL1Q99990 258 aa12.25□□□□□ -0.45
CHRFAM7A-203ENST00000401522 SIGLEC8Q9NYZ4 499 aa12.25□□□□□ -0.45
CHRFAM7A-203ENST00000401522 VPREB3Q9UKI3 123 aa12.25□□□□□ -0.45
CHRFAM7A-203ENST00000401522 LY6EQ16553 131 aa12.24□□□□□ -0.45
CHRFAM7A-203ENST00000401522 MRPL51Q4U2R6 128 aaKnown RBP12.24□□□□□ -0.45
CHRFAM7A-203ENST00000401522 AMN1Q8IY45 258 aa12.24□□□□□ -0.45
CHRFAM7A-203ENST00000401522 ZNF418Q8TF45 676 aaPredicted RBP12.24□□□□□ -0.45
CHRFAM7A-203ENST00000401522 PMCHL2Q9BQD1 86 aa12.24□□□□□ -0.45
CHRFAM7A-203ENST00000401522 H0Y8G0 127 aa12.23□□□□□ -0.45
CHRFAM7A-203ENST00000401522 IGLC6P0CF74 106 aa12.23□□□□□ -0.45
CHRFAM7A-203ENST00000401522 C15orf32Q32M92 178 aa12.23□□□□□ -0.45
CHRFAM7A-203ENST00000401522 TMEM219Q86XT9 240 aa12.23□□□□□ -0.45
CHRFAM7A-203ENST00000401522 Q8TAT8 98 aa12.23□□□□□ -0.45
CHRFAM7A-203ENST00000401522 TIMM8BQ9Y5J9 83 aaPredicted RBP12.23□□□□□ -0.45
CHRFAM7A-203ENST00000401522 GPR183P32249 361 aa12.23□□□□□ -0.45
CHRFAM7A-203ENST00000401522 HILS1P60008 231 aa12.23□□□□□ -0.45
CHRFAM7A-203ENST00000401522 C12orf54Q6X4T0 127 aa12.23□□□□□ -0.45
CHRFAM7A-203ENST00000401522 ZFAND3Q9H8U3 227 aa12.23□□□□□ -0.45
CHRFAM7A-203ENST00000401522 RBAKDNA6NC62 111 aa12.22□□□□□ -0.45
CHRFAM7A-203ENST00000401522 TCF21O43680 179 aa12.22□□□□□ -0.45
CHRFAM7A-203ENST00000401522 ZNF80P51504 273 aaPredicted RBP12.22□□□□□ -0.45
CHRFAM7A-203ENST00000401522 RHOGP84095 191 aa12.22□□□□□ -0.45
CHRFAM7A-203ENST00000401522 DPF1Q92782 380 aa12.22□□□□□ -0.45
CHRFAM7A-203ENST00000401522 ESM1Q9NQ30 184 aa12.22□□□□□ -0.45
CHRFAM7A-203ENST00000401522 PPP1R14DQ9NXH3 145 aa12.22□□□□□ -0.45
CHRFAM7A-203ENST00000401522 MOB4Q9Y3A3 225 aa12.22□□□□□ -0.45
CHRFAM7A-203ENST00000401522 A0A096LNJ9 63 aa12.21□□□□□ -0.45
CHRFAM7A-203ENST00000401522 LOC389332A0A1B0GUA5 103 aa12.21□□□□□ -0.45
CHRFAM7A-203ENST00000401522 DNAJC9-AS1A6NH13 148 aa12.21□□□□□ -0.45
CHRFAM7A-203ENST00000401522 TWIST1Q15672 202 aa12.21□□□□□ -0.45
CHRFAM7A-203ENST00000401522 ECSCRQ19T08 205 aa12.21□□□□□ -0.45
CHRFAM7A-203ENST00000401522 MPV17L2Q567V2 206 aa12.21□□□□□ -0.45
CHRFAM7A-203ENST00000401522 SLC50A1Q9BRV3 221 aa12.21□□□□□ -0.45
CHRFAM7A-203ENST00000401522 MCRIP2Q9BUT9 160 aaKnown RBP12.21□□□□□ -0.45
CHRFAM7A-203ENST00000401522 CUBNO60494 3623 aa12.21□□□□□ -0.45
CHRFAM7A-203ENST00000401522 FABP5P3A8MUU1 101 aa12.21□□□□□ -0.46
CHRFAM7A-203ENST00000401522 BUB3O43684 328 aa12.21□□□□□ -0.46
CHRFAM7A-203ENST00000401522 HLA-DMBP28068 263 aa12.21□□□□□ -0.46
CHRFAM7A-203ENST00000401522 HIST1H1AQ02539 215 aaPredicted RBP12.21□□□□□ -0.46
CHRFAM7A-203ENST00000401522 IGFL4Q6B9Z1 124 aa12.21□□□□□ -0.46
CHRFAM7A-203ENST00000401522 C5orf56Q8N8D9 126 aa12.21□□□□□ -0.46
CHRFAM7A-203ENST00000401522 JMJD8Q96S16 334 aa12.21□□□□□ -0.46
CHRFAM7A-203ENST00000401522 CNFNQ9BYD5 112 aa12.21□□□□□ -0.46
CHRFAM7A-203ENST00000401522 ATP6V0E1O15342 81 aa12.2□□□□□ -0.46
CHRFAM7A-203ENST00000401522 NUDT3O95989 172 aa12.2□□□□□ -0.46
CHRFAM7A-203ENST00000401522 CLEC3BP05452 202 aa12.2□□□□□ -0.46
CHRFAM7A-203ENST00000401522 COX8AP10176 69 aa12.2□□□□□ -0.46
CHRFAM7A-203ENST00000401522 CKS2P33552 79 aa12.2□□□□□ -0.46
CHRFAM7A-203ENST00000401522 PTTG1IPP53801 180 aa12.2□□□□□ -0.46
CHRFAM7A-203ENST00000401522 UBE2V1Q13404 147 aa12.2□□□□□ -0.46
CHRFAM7A-203ENST00000401522 LGALS9BQ3B8N2 356 aa12.2□□□□□ -0.46
CHRFAM7A-203ENST00000401522 FAM106AQ4KMX7 169 aa12.2□□□□□ -0.46
CHRFAM7A-203ENST00000401522 BVES-AS1Q5T3Y7 98 aa12.2□□□□□ -0.46
CHRFAM7A-203ENST00000401522 LGALS9CQ6DKI2 356 aa12.2□□□□□ -0.46
CHRFAM7A-203ENST00000401522 TP73-AS1Q9UF72 201 aa12.2□□□□□ -0.46
CHRFAM7A-203ENST00000401522 TEP1Q99973 2627 aaKnown RBP12.2□□□□□ -0.46
CHRFAM7A-203ENST00000401522 NCR2O95944 276 aa12.19□□□□□ -0.46
CHRFAM7A-203ENST00000401522 HBDP02042 147 aa12.19□□□□□ -0.46
CHRFAM7A-203ENST00000401522 ORM1P02763 201 aa12.19□□□□□ -0.46
CHRFAM7A-203ENST00000401522 PPBPP02775 128 aa12.19□□□□□ -0.46
CHRFAM7A-203ENST00000401522 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.19□□□□□ -0.46
CHRFAM7A-203ENST00000401522 DUX5Q96PT3 197 aa12.19□□□□□ -0.46
CHRFAM7A-203ENST00000401522 NPFFR1Q9GZQ6 430 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms