RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 SAMD5Q5TGI4 173 aa10.87□□□□□ -0.67
CACNA1C-211ENST00000399617 PLEKHB2Q96CS7 222 aa10.87□□□□□ -0.67
CACNA1C-211ENST00000399617 CYYR1Q96J86 154 aa10.87□□□□□ -0.67
CACNA1C-211ENST00000399617 SCRT2Q9NQ03 307 aa10.87□□□□□ -0.67
CACNA1C-211ENST00000399617 C15orf65H3BRN8 121 aa10.87□□□□□ -0.67
CACNA1C-211ENST00000399617 Q8NA96 180 aa10.87□□□□□ -0.67
CACNA1C-211ENST00000399617 WIPF2Q8TF74 440 aaPredicted RBP10.87□□□□□ -0.67
CACNA1C-211ENST00000399617 TMEM170AQ8WVE7 144 aa10.87□□□□□ -0.67
CACNA1C-211ENST00000399617 GNB1LQ9BYB4 327 aa10.87□□□□□ -0.67
CACNA1C-211ENST00000399617 LRRK1Q38SD2 2015 aa10.87□□□□□ -0.67
CACNA1C-211ENST00000399617 ESDP10768 282 aa10.86□□□□□ -0.67
CACNA1C-211ENST00000399617 C5orf38Q86SI9 138 aa10.86□□□□□ -0.67
CACNA1C-211ENST00000399617 TRBV19A0A075B6N1 114 aa10.86□□□□□ -0.67
CACNA1C-211ENST00000399617 M0R2N4 97 aa10.86□□□□□ -0.67
CACNA1C-211ENST00000399617 TRBV6-6A0A0A6YYG2 114 aa10.86□□□□□ -0.67
CACNA1C-211ENST00000399617 GUSBP1Q15486 140 aa10.86□□□□□ -0.67
CACNA1C-211ENST00000399617 NPBQ8NG41 125 aa10.86□□□□□ -0.67
CACNA1C-211ENST00000399617 ZNF479Q96JC4 524 aa10.86□□□□□ -0.67
CACNA1C-211ENST00000399617 C1orf43Q9BWL3 253 aa10.86□□□□□ -0.67
CACNA1C-211ENST00000399617 FGF16O43320 207 aa10.86□□□□□ -0.67
CACNA1C-211ENST00000399617 LY6G6DO95868 133 aa10.86□□□□□ -0.67
CACNA1C-211ENST00000399617 SMR3AQ99954 134 aa10.86□□□□□ -0.67
CACNA1C-211ENST00000399617 SDHAF1A6NFY7 115 aa10.85□□□□□ -0.67
CACNA1C-211ENST00000399617 LINC00587B1AMM8 73 aa10.85□□□□□ -0.67
CACNA1C-211ENST00000399617 IGLL1P15814 213 aa10.85□□□□□ -0.67
CACNA1C-211ENST00000399617 YPEL3P61236 119 aaPredicted RBP10.85□□□□□ -0.67
CACNA1C-211ENST00000399617 MRPL52Q86TS9 123 aaKnown RBP10.85□□□□□ -0.67
CACNA1C-211ENST00000399617 BUB3O43684 328 aa10.85□□□□□ -0.67
CACNA1C-211ENST00000399617 LINC01551Q86U37 167 aa10.85□□□□□ -0.67
CACNA1C-211ENST00000399617 SMPXQ9UHP9 88 aa10.85□□□□□ -0.67
CACNA1C-211ENST00000399617 STPG4Q8N801 248 aa10.85□□□□□ -0.67
CACNA1C-211ENST00000399617 CHAC1Q9BUX1 264 aa10.85□□□□□ -0.67
CACNA1C-211ENST00000399617 A0A087X0K7 114 aa10.85□□□□□ -0.67
CACNA1C-211ENST00000399617 SPART-AS1P0CW21 52 aa10.85□□□□□ -0.67
CACNA1C-211ENST00000399617 KLK5Q9Y337 293 aaPredicted RBP10.85□□□□□ -0.67
CACNA1C-211ENST00000399617 H3BRN7 92 aa10.84□□□□□ -0.67
CACNA1C-211ENST00000399617 ZNF124Q15973 351 aa10.84□□□□□ -0.67
CACNA1C-211ENST00000399617 SEM1Q6ZVN7 128 aa10.84□□□□□ -0.67
CACNA1C-211ENST00000399617 ADAMTSL5Q6ZMM2 481 aa10.84□□□□□ -0.67
CACNA1C-211ENST00000399617 CHCHD1Q96BP2 118 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-211ENST00000399617 CYTL1Q9NRR1 136 aa10.84□□□□□ -0.67
CACNA1C-211ENST00000399617 RSPO1Q2MKA7 263 aaPredicted RBP10.84□□□□□ -0.67
CACNA1C-211ENST00000399617 GAGE2AQ6NT46 116 aa10.84□□□□□ -0.67
CACNA1C-211ENST00000399617 CLPSL1A2RUU4 121 aa10.84□□□□□ -0.67
CACNA1C-211ENST00000399617 DYNAPQ8N1N2 210 aa10.84□□□□□ -0.67
CACNA1C-211ENST00000399617 RNF138Q8WVD3 245 aa10.84□□□□□ -0.67
CACNA1C-211ENST00000399617 ICOSQ9Y6W8 199 aa10.84□□□□□ -0.67
CACNA1C-211ENST00000399617 CHD3Q12873 2000 aaKnown RBP10.84□□□□□ -0.67
CACNA1C-211ENST00000399617 CACNA1DQ01668 2161 aa10.83□□□□□ -0.67
CACNA1C-211ENST00000399617 SRSF8Q9BRL6 282 aaKnown RBP10.83□□□□□ -0.68
CACNA1C-211ENST00000399617 KLF12Q9Y4X4 402 aa10.83□□□□□ -0.68
CACNA1C-211ENST00000399617 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.83□□□□□ -0.68
CACNA1C-211ENST00000399617 LYPD1Q8N2G4 141 aa10.83□□□□□ -0.68
CACNA1C-211ENST00000399617 PRSS57Q6UWY2 283 aa10.83□□□□□ -0.68
CACNA1C-211ENST00000399617 TANC1Q9C0D5 1861 aa10.83□□□□□ -0.68
CACNA1C-211ENST00000399617 TIRAPP58753 221 aa10.83□□□□□ -0.68
CACNA1C-211ENST00000399617 PTPRDP23468 1912 aa10.83□□□□□ -0.68
CACNA1C-211ENST00000399617 IGHV1-24A0A0C4DH33 117 aa10.82□□□□□ -0.68
CACNA1C-211ENST00000399617 CFHR4Q92496 578 aa10.82□□□□□ -0.68
CACNA1C-211ENST00000399617 GTSF1LQ9H1H1 148 aa10.82□□□□□ -0.68
CACNA1C-211ENST00000399617 KIF26AQ9ULI4 1882 aaPredicted RBP10.82□□□□□ -0.68
CACNA1C-211ENST00000399617 ZNF407Q9C0G0 2248 aa10.82□□□□□ -0.68
CACNA1C-211ENST00000399617 MRPL53Q96EL3 112 aaKnown RBP10.82□□□□□ -0.68
CACNA1C-211ENST00000399617 RHODO00212 210 aa10.82□□□□□ -0.68
CACNA1C-211ENST00000399617 SEC11AP67812 179 aa10.82□□□□□ -0.68
CACNA1C-211ENST00000399617 RNF183Q96D59 192 aa10.82□□□□□ -0.68
CACNA1C-211ENST00000399617 FOXI2Q6ZQN5 318 aa10.82□□□□□ -0.68
CACNA1C-211ENST00000399617 ZC2HC1BQ5TFG8 222 aa10.82□□□□□ -0.68
CACNA1C-211ENST00000399617 ZFHX2Q9C0A1 2572 aaPredicted RBP10.82□□□□□ -0.68
CACNA1C-211ENST00000399617 TRAV9-1A0A075B6T8 112 aa10.81□□□□□ -0.68
CACNA1C-211ENST00000399617 IGHV4-28A0A0C4DH34 117 aa10.81□□□□□ -0.68
CACNA1C-211ENST00000399617 TRBV12-3P01733 135 aa10.81□□□□□ -0.68
CACNA1C-211ENST00000399617 CARHSP1Q9Y2V2 147 aaKnown RBP10.81□□□□□ -0.68
CACNA1C-211ENST00000399617 IGHV7-81A0A0B4J1V7 117 aa10.81□□□□□ -0.68
CACNA1C-211ENST00000399617 TRAV12-1A0A0B4J245 112 aa10.81□□□□□ -0.68
CACNA1C-211ENST00000399617 C11orf53Q8IXP5 236 aa10.81□□□□□ -0.68
CACNA1C-211ENST00000399617 NDUFAF3Q9BU61 184 aa10.81□□□□□ -0.68
CACNA1C-211ENST00000399617 A0A087WWC5 75 aa10.81□□□□□ -0.68
CACNA1C-211ENST00000399617 ZNF503Q96F45 646 aa10.81□□□□□ -0.68
CACNA1C-211ENST00000399617 RLFQ13129 1914 aa10.81□□□□□ -0.68
CACNA1C-211ENST00000399617 IGFL2Q6UWQ7 119 aa10.81□□□□□ -0.68
CACNA1C-211ENST00000399617 ZC2HC1AQ96GY0 325 aa10.81□□□□□ -0.68
CACNA1C-211ENST00000399617 RHOHQ15669 191 aa10.81□□□□□ -0.68
CACNA1C-211ENST00000399617 C2orf66Q6UXQ4 117 aa10.81□□□□□ -0.68
CACNA1C-211ENST00000399617 IGLV2-18A0A075B6J9 118 aa10.8□□□□□ -0.68
CACNA1C-211ENST00000399617 ATP5G1P05496 136 aa10.8□□□□□ -0.68
CACNA1C-211ENST00000399617 C9orf153Q5TBE3 101 aa10.8□□□□□ -0.68
CACNA1C-211ENST00000399617 C2orf82Q6UX34 121 aa10.8□□□□□ -0.68
CACNA1C-211ENST00000399617 LINC00482Q8N8I6 264 aa10.8□□□□□ -0.68
CACNA1C-211ENST00000399617 PKDREJQ9NTG1 2253 aa10.8□□□□□ -0.68
CACNA1C-211ENST00000399617 WIPF3A6NGB9 483 aa10.8□□□□□ -0.68
CACNA1C-211ENST00000399617 CRYGCP07315 174 aa10.8□□□□□ -0.68
CACNA1C-211ENST00000399617 AMTNQ6UX39 209 aa10.8□□□□□ -0.68
CACNA1C-211ENST00000399617 ROS1P08922 2347 aa10.8□□□□□ -0.68
CACNA1C-211ENST00000399617 FANCD2OSQ96PS1 177 aa10.8□□□□□ -0.68
CACNA1C-211ENST00000399617 C15orf53Q8NAA6 179 aa10.79□□□□□ -0.68
CACNA1C-211ENST00000399617 SIP14410 1827 aa10.79□□□□□ -0.68
CACNA1C-211ENST00000399617 HSD52Q0P140 79 aa10.79□□□□□ -0.68
CACNA1C-211ENST00000399617 VOPP1Q96AW1 172 aa10.79□□□□□ -0.68
CACNA1C-211ENST00000399617 SMIM2Q9BVW6 85 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms