RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 MPV17L2Q567V2 206 aa11.29□□□□□ -0.6
PCDHA11-201ENST00000398640 C9orf66Q5T8R8 295 aa11.29□□□□□ -0.6
PCDHA11-201ENST00000398640 SEM1Q6ZVN7 128 aa11.29□□□□□ -0.6
PCDHA11-201ENST00000398640 NOP10Q9NPE3 64 aaKnown RBP11.29□□□□□ -0.6
PCDHA11-201ENST00000398640 YPEL3P61236 119 aaPredicted RBP11.29□□□□□ -0.6
PCDHA11-201ENST00000398640 TRAV25A0A0B4J276 109 aa11.29□□□□□ -0.6
PCDHA11-201ENST00000398640 CYYR1Q96J86 154 aa11.29□□□□□ -0.6
PCDHA11-201ENST00000398640 DOPEY2Q9Y3R5 2298 aa11.29□□□□□ -0.6
PCDHA11-201ENST00000398640 TMEM243Q9BU79 118 aa11.29□□□□□ -0.6
PCDHA11-201ENST00000398640 KIAA2026Q5HYC2 2103 aa11.29□□□□□ -0.6
PCDHA11-201ENST00000398640 RHODO00212 210 aa11.29□□□□□ -0.6
PCDHA11-201ENST00000398640 MMP23AO75900 390 aa11.29□□□□□ -0.6
PCDHA11-201ENST00000398640 SLURP1P55000 103 aa11.29□□□□□ -0.6
PCDHA11-201ENST00000398640 RNASE13Q5GAN3 156 aaKnown RBP11.29□□□□□ -0.6
PCDHA11-201ENST00000398640 KAAG1Q9UBP8 84 aa11.29□□□□□ -0.6
PCDHA11-201ENST00000398640 EP400Q96L91 3159 aa11.29□□□□□ -0.6
PCDHA11-201ENST00000398640 UBE2BP63146 152 aa11.28□□□□□ -0.6
PCDHA11-201ENST00000398640 KIR3DS1Q14943 382 aa11.28□□□□□ -0.6
PCDHA11-201ENST00000398640 TRBV19A0A075B6N1 114 aa11.28□□□□□ -0.6
PCDHA11-201ENST00000398640 CFPP27918 469 aa11.28□□□□□ -0.6
PCDHA11-201ENST00000398640 DNAJC30Q96LL9 226 aa11.28□□□□□ -0.6
PCDHA11-201ENST00000398640 KIAA1549LQ6ZVL6 1849 aa11.28□□□□□ -0.6
PCDHA11-201ENST00000398640 ELANEP08246 267 aa11.28□□□□□ -0.6
PCDHA11-201ENST00000398640 GAGE2BQ13066 116 aa11.28□□□□□ -0.6
PCDHA11-201ENST00000398640 Q6ZQT7 251 aa11.28□□□□□ -0.6
PCDHA11-201ENST00000398640 NCOR1P1Q9H4R4 102 aa11.28□□□□□ -0.6
PCDHA11-201ENST00000398640 C9JAW5 83 aa11.28□□□□□ -0.6
PCDHA11-201ENST00000398640 APRG1Q8IVJ8 170 aa11.28□□□□□ -0.6
PCDHA11-201ENST00000398640 C19orf84I3L1E1 186 aa11.28□□□□□ -0.6
PCDHA11-201ENST00000398640 RNF138Q8WVD3 245 aa11.27□□□□□ -0.6
PCDHA11-201ENST00000398640 C2orf66Q6UXQ4 117 aa11.27□□□□□ -0.6
PCDHA11-201ENST00000398640 OVOL2Q9BRP0 275 aa11.27□□□□□ -0.6
PCDHA11-201ENST00000398640 GFRA4Q9GZZ7 299 aa11.27□□□□□ -0.6
PCDHA11-201ENST00000398640 MRPL27Q9P0M9 148 aaKnown RBP11.27□□□□□ -0.6
PCDHA11-201ENST00000398640 HLA-DRB4P13762 266 aa11.27□□□□□ -0.61
PCDHA11-201ENST00000398640 GP9P14770 177 aa11.27□□□□□ -0.61
PCDHA11-201ENST00000398640 HLA-DRB4X5D2U9 266 aa11.27□□□□□ -0.61
PCDHA11-201ENST00000398640 PIFOQ8TCI5 191 aa11.27□□□□□ -0.61
PCDHA11-201ENST00000398640 ADCYAP1P18509 176 aa11.27□□□□□ -0.61
PCDHA11-201ENST00000398640 PRSS29PA6NIE9 313 aa11.26□□□□□ -0.61
PCDHA11-201ENST00000398640 DOCK7Q96N67 2140 aa11.26□□□□□ -0.61
PCDHA11-201ENST00000398640 IGHV7-4-1A0A0J9YVY3 117 aa11.26□□□□□ -0.61
PCDHA11-201ENST00000398640 ZFAND6Q6FIF0 208 aa11.26□□□□□ -0.61
PCDHA11-201ENST00000398640 PRSS57Q6UWY2 283 aa11.26□□□□□ -0.61
PCDHA11-201ENST00000398640 RSPO3Q9BXY4 272 aaPredicted RBP11.26□□□□□ -0.61
PCDHA11-201ENST00000398640 SDHAF1A6NFY7 115 aa11.26□□□□□ -0.61
PCDHA11-201ENST00000398640 KLF5Q13887 457 aaPredicted RBP11.26□□□□□ -0.61
PCDHA11-201ENST00000398640 PRSS46E5RG02 174 aa11.26□□□□□ -0.61
PCDHA11-201ENST00000398640 ATP6V0BQ99437 205 aa11.26□□□□□ -0.61
PCDHA11-201ENST00000398640 PTPRSQ13332 1948 aa11.25□□□□□ -0.61
PCDHA11-201ENST00000398640 ARFGEF3Q5TH69 2177 aa11.25□□□□□ -0.61
PCDHA11-201ENST00000398640 PLXNB3Q9ULL4 1909 aa11.25□□□□□ -0.61
PCDHA11-201ENST00000398640 HIST2H2BCQ6DN03 193 aa11.25□□□□□ -0.61
PCDHA11-201ENST00000398640 ZNF134P52741 427 aa11.25□□□□□ -0.61
PCDHA11-201ENST00000398640 F6UB75 175 aa11.24□□□□□ -0.61
PCDHA11-201ENST00000398640 WT1-ASQ06250 92 aa11.24□□□□□ -0.61
PCDHA11-201ENST00000398640 C1orf194Q5T5A4 169 aa11.24□□□□□ -0.61
PCDHA11-201ENST00000398640 ESM1Q9NQ30 184 aa11.24□□□□□ -0.61
PCDHA11-201ENST00000398640 H3BRN7 92 aa11.24□□□□□ -0.61
PCDHA11-201ENST00000398640 RBMY1FQ15415 496 aaKnown RBP11.24□□□□□ -0.61
PCDHA11-201ENST00000398640 TMEM141Q96I45 108 aa11.24□□□□□ -0.61
PCDHA11-201ENST00000398640 SCRT2Q9NQ03 307 aa11.24□□□□□ -0.61
PCDHA11-201ENST00000398640 CADP27708 2225 aa11.24□□□□□ -0.61
PCDHA11-201ENST00000398640 MRPL51Q4U2R6 128 aaKnown RBP11.23□□□□□ -0.61
PCDHA11-201ENST00000398640 LINC00311Q8N616 119 aa11.23□□□□□ -0.61
PCDHA11-201ENST00000398640 FAM104BQ5XKR9 115 aa11.23□□□□□ -0.61
PCDHA11-201ENST00000398640 F8W735 103 aaPredicted RBP11.23□□□□□ -0.61
PCDHA11-201ENST00000398640 SPINK8P0C7L1 97 aa11.23□□□□□ -0.61
PCDHA11-201ENST00000398640 Q8N8P6 123 aa11.23□□□□□ -0.61
PCDHA11-201ENST00000398640 ZFP36P26651 326 aaKnown RBP11.23□□□□□ -0.61
PCDHA11-201ENST00000398640 ZNF407Q9C0G0 2248 aa11.23□□□□□ -0.61
PCDHA11-201ENST00000398640 SPTBN1Q01082 2364 aaKnown RBP11.22□□□□□ -0.61
PCDHA11-201ENST00000398640 SPRNQ5BIV9 151 aa11.22□□□□□ -0.61
PCDHA11-201ENST00000398640 PRR25Q96S07 402 aa11.22□□□□□ -0.61
PCDHA11-201ENST00000398640 C9JQL5 133 aa11.22□□□□□ -0.61
PCDHA11-201ENST00000398640 RPL18AQ02543 176 aaKnown RBP11.22□□□□□ -0.61
PCDHA11-201ENST00000398640 ZNF492Q9P255 531 aa11.22□□□□□ -0.61
PCDHA11-201ENST00000398640 HLA-DMBP28068 263 aa11.22□□□□□ -0.61
PCDHA11-201ENST00000398640 TAL2Q16559 108 aa11.22□□□□□ -0.61
PCDHA11-201ENST00000398640 USF3Q68DE3 2245 aa11.21□□□□□ -0.61
PCDHA11-201ENST00000398640 CTSZQ9UBR2 303 aa11.21□□□□□ -0.61
PCDHA11-201ENST00000398640 XCL1P47992 114 aa11.21□□□□□ -0.61
PCDHA11-201ENST00000398640 TTC28Q96AY4 2481 aa11.21□□□□□ -0.61
PCDHA11-201ENST00000398640 C15orf65H3BRN8 121 aa11.21□□□□□ -0.61
PCDHA11-201ENST00000398640 WISP2O76076 250 aa11.21□□□□□ -0.61
PCDHA11-201ENST00000398640 LOXL1Q08397 574 aaPredicted RBP11.21□□□□□ -0.61
PCDHA11-201ENST00000398640 ZNF726P1Q15940 193 aa11.21□□□□□ -0.62
PCDHA11-201ENST00000398640 MORN5Q5VZ52 161 aa11.21□□□□□ -0.62
PCDHA11-201ENST00000398640 IGHV3-30P01768 117 aa11.21□□□□□ -0.62
PCDHA11-201ENST00000398640 IGHV3-33P01772 117 aa11.21□□□□□ -0.62
PCDHA11-201ENST00000398640 IGHV3-30-3P0DP02 117 aa11.21□□□□□ -0.62
PCDHA11-201ENST00000398640 IGHV3-30-5P0DP03 117 aa11.21□□□□□ -0.62
PCDHA11-201ENST00000398640 CEP192Q8TEP8 1941 aa11.21□□□□□ -0.62
PCDHA11-201ENST00000398640 TMEM131Q92545 1883 aa11.2□□□□□ -0.62
PCDHA11-201ENST00000398640 SPRY2O43597 315 aa11.2□□□□□ -0.62
PCDHA11-201ENST00000398640 C17orf77Q96MU5 243 aa11.2□□□□□ -0.62
PCDHA11-201ENST00000398640 H3BMM0 161 aa11.2□□□□□ -0.62
PCDHA11-201ENST00000398640 UBE2WQ96B02 151 aa11.2□□□□□ -0.62
PCDHA11-201ENST00000398640 ZC2HC1AQ96GY0 325 aa11.2□□□□□ -0.62
PCDHA11-201ENST00000398640 GNRH2O43555 120 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 1279 ms