RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 MYLKQ15746 1914 aa12.85□□□□□ -0.35
PCDHA12-201ENST00000398631 IGHV4-59P01825 116 aa12.85□□□□□ -0.35
PCDHA12-201ENST00000398631 SDHAF1A6NFY7 115 aa12.85□□□□□ -0.35
PCDHA12-201ENST00000398631 I3L3M4 83 aa12.85□□□□□ -0.35
PCDHA12-201ENST00000398631 HOXB4P17483 251 aaPredicted RBP12.85□□□□□ -0.35
PCDHA12-201ENST00000398631 ZNF726P1Q15940 193 aa12.85□□□□□ -0.35
PCDHA12-201ENST00000398631 A0A087X0K7 114 aa12.84□□□□□ -0.35
PCDHA12-201ENST00000398631 ESDP10768 282 aa12.84□□□□□ -0.35
PCDHA12-201ENST00000398631 ZFAND6Q6FIF0 208 aa12.84□□□□□ -0.35
PCDHA12-201ENST00000398631 ZNF491Q8N8L2 437 aa12.84□□□□□ -0.35
PCDHA12-201ENST00000398631 C18orf32Q8TCD1 76 aa12.84□□□□□ -0.35
PCDHA12-201ENST00000398631 LAMTOR3Q9UHA4 124 aa12.84□□□□□ -0.35
PCDHA12-201ENST00000398631 HIVEP2P31629 2446 aa12.84□□□□□ -0.35
PCDHA12-201ENST00000398631 A8MWP6 167 aa12.84□□□□□ -0.35
PCDHA12-201ENST00000398631 Q8N8P6 123 aa12.84□□□□□ -0.35
PCDHA12-201ENST00000398631 OR11H6Q8NGC7 330 aa12.84□□□□□ -0.35
PCDHA12-201ENST00000398631 ATP6V0BQ99437 205 aa12.84□□□□□ -0.35
PCDHA12-201ENST00000398631 WNK1Q9H4A3 2382 aa12.84□□□□□ -0.35
PCDHA12-201ENST00000398631 IGHV4-61A0A0C4DH41 118 aa12.83□□□□□ -0.36
PCDHA12-201ENST00000398631 DEFB113Q30KQ7 82 aa12.83□□□□□ -0.36
PCDHA12-201ENST00000398631 CHAC1Q9BUX1 264 aa12.83□□□□□ -0.36
PCDHA12-201ENST00000398631 ZNRF2Q8NHG8 242 aa12.83□□□□□ -0.36
PCDHA12-201ENST00000398631 TMEM141Q96I45 108 aa12.83□□□□□ -0.36
PCDHA12-201ENST00000398631 NAA38Q9BRA0 125 aaKnown RBP12.83□□□□□ -0.36
PCDHA12-201ENST00000398631 KIR3DS1Q14943 382 aa12.83□□□□□ -0.36
PCDHA12-201ENST00000398631 PIEZO1Q92508 2521 aa12.83□□□□□ -0.36
PCDHA12-201ENST00000398631 IGLC7A0M8Q6 106 aa12.83□□□□□ -0.36
PCDHA12-201ENST00000398631 INS-IGF2F8WCM5 200 aa12.83□□□□□ -0.36
PCDHA12-201ENST00000398631 F8WEM9 126 aa12.83□□□□□ -0.36
PCDHA12-201ENST00000398631 ZNF561-AS1K7EIQ3 104 aa12.83□□□□□ -0.36
PCDHA12-201ENST00000398631 CENPVL3A0A0U1RRI6 287 aa12.82□□□□□ -0.36
PCDHA12-201ENST00000398631 PRR20EP86478 221 aa12.82□□□□□ -0.36
PCDHA12-201ENST00000398631 PRR20CP86479 221 aa12.82□□□□□ -0.36
PCDHA12-201ENST00000398631 PRR20DP86480 221 aa12.82□□□□□ -0.36
PCDHA12-201ENST00000398631 PRR20BP86481 221 aa12.82□□□□□ -0.36
PCDHA12-201ENST00000398631 PRR20AP86496 221 aa12.82□□□□□ -0.36
PCDHA12-201ENST00000398631 FXYD5Q96DB9 178 aa12.82□□□□□ -0.36
PCDHA12-201ENST00000398631 TMEM243Q9BU79 118 aa12.82□□□□□ -0.36
PCDHA12-201ENST00000398631 WIPF3A6NGB9 483 aa12.81□□□□□ -0.36
PCDHA12-201ENST00000398631 OVOL2Q9BRP0 275 aa12.81□□□□□ -0.36
PCDHA12-201ENST00000398631 LHBP01229 141 aa12.81□□□□□ -0.36
PCDHA12-201ENST00000398631 KLF2Q9Y5W3 355 aaPredicted RBP12.81□□□□□ -0.36
PCDHA12-201ENST00000398631 PRSS57Q6UWY2 283 aa12.81□□□□□ -0.36
PCDHA12-201ENST00000398631 TSSC4Q9Y5U2 329 aaPredicted RBP12.81□□□□□ -0.36
PCDHA12-201ENST00000398631 PLXND1Q9Y4D7 1925 aa12.81□□□□□ -0.36
PCDHA12-201ENST00000398631 C10orf91Q5T1B1 145 aa12.81□□□□□ -0.36
PCDHA12-201ENST00000398631 NEGR1Q7Z3B1 354 aa12.81□□□□□ -0.36
PCDHA12-201ENST00000398631 PMVKQ15126 192 aa12.8□□□□□ -0.36
PCDHA12-201ENST00000398631 MRPL51Q4U2R6 128 aaKnown RBP12.8□□□□□ -0.36
PCDHA12-201ENST00000398631 C11orf52Q96A22 123 aa12.8□□□□□ -0.36
PCDHA12-201ENST00000398631 ZNF625Q96I27 306 aaPredicted RBP12.8□□□□□ -0.36
PCDHA12-201ENST00000398631 COX11Q9Y6N1 276 aa12.8□□□□□ -0.36
PCDHA12-201ENST00000398631 LGALS1P09382 135 aaKnown RBP12.8□□□□□ -0.36
PCDHA12-201ENST00000398631 POLR3KQ9Y2Y1 108 aaPredicted RBP12.8□□□□□ -0.36
PCDHA12-201ENST00000398631 V9GYV3 84 aa12.8□□□□□ -0.36
PCDHA12-201ENST00000398631 NDUFS6O75380 124 aaKnown RBP12.8□□□□□ -0.36
PCDHA12-201ENST00000398631 NUP210Q8TEM1 1887 aaPredicted RBP12.8□□□□□ -0.36
PCDHA12-201ENST00000398631 IGHV4-30-2A0A087WSY4 118 aa12.79□□□□□ -0.36
PCDHA12-201ENST00000398631 STPG4Q8N801 248 aa12.79□□□□□ -0.36
PCDHA12-201ENST00000398631 ZNF114Q8NC26 417 aa12.79□□□□□ -0.36
PCDHA12-201ENST00000398631 HOXD3P31249 432 aaPredicted RBP12.79□□□□□ -0.36
PCDHA12-201ENST00000398631 ZC2HC1AQ96GY0 325 aa12.79□□□□□ -0.36
PCDHA12-201ENST00000398631 PRB1P04280 392 aa12.78□□□□□ -0.36
PCDHA12-201ENST00000398631 C2orf82Q6UX34 121 aa12.78□□□□□ -0.36
PCDHA12-201ENST00000398631 FOXI2Q6ZQN5 318 aa12.78□□□□□ -0.36
PCDHA12-201ENST00000398631 FRMPD3Q5JV73 1810 aa12.78□□□□□ -0.36
PCDHA12-201ENST00000398631 TNCP24821 2201 aa12.78□□□□□ -0.36
PCDHA12-201ENST00000398631 EREGO14944 169 aa12.78□□□□□ -0.36
PCDHA12-201ENST00000398631 CCL24O00175 119 aa12.77□□□□□ -0.36
PCDHA12-201ENST00000398631 SRSF2Q01130 221 aaKnown RBP12.77□□□□□ -0.36
PCDHA12-201ENST00000398631 FGF23Q9GZV9 251 aaPredicted RBP12.77□□□□□ -0.36
PCDHA12-201ENST00000398631 IGHV3-38A0A0C4DH36 116 aa12.77□□□□□ -0.37
PCDHA12-201ENST00000398631 GAGE6Q13070 117 aa12.77□□□□□ -0.37
PCDHA12-201ENST00000398631 SPRNQ5BIV9 151 aa12.77□□□□□ -0.37
PCDHA12-201ENST00000398631 DNAJC30Q96LL9 226 aa12.77□□□□□ -0.37
PCDHA12-201ENST00000398631 SMIM2Q9BVW6 85 aa12.77□□□□□ -0.37
PCDHA12-201ENST00000398631 SPRY4Q9C004 299 aa12.77□□□□□ -0.37
PCDHA12-201ENST00000398631 CDK2AP2O75956 126 aa12.76□□□□□ -0.37
PCDHA12-201ENST00000398631 ADORA2A-AS1P86434 159 aa12.76□□□□□ -0.37
PCDHA12-201ENST00000398631 SLAQ13239 276 aa12.76□□□□□ -0.37
PCDHA12-201ENST00000398631 HLA-DRB4P13762 266 aa12.76□□□□□ -0.37
PCDHA12-201ENST00000398631 IL15RAQ13261 267 aa12.76□□□□□ -0.37
PCDHA12-201ENST00000398631 HLA-DRB4X5D2U9 266 aa12.76□□□□□ -0.37
PCDHA12-201ENST00000398631 DYSFO75923 2080 aa12.76□□□□□ -0.37
PCDHA12-201ENST00000398631 TRAV26-2A0A0B4J265 109 aa12.76□□□□□ -0.37
PCDHA12-201ENST00000398631 SMIM27A0A1W2PRY6 76 aa12.76□□□□□ -0.37
PCDHA12-201ENST00000398631 VWC2LB2RUY7 222 aa12.75□□□□□ -0.37
PCDHA12-201ENST00000398631 C10orf105Q8TEF2 133 aa12.75□□□□□ -0.37
PCDHA12-201ENST00000398631 IGHV4-38-2P0DP08 117 aa12.75□□□□□ -0.37
PCDHA12-201ENST00000398631 LENEPQ9Y5L5 61 aa12.75□□□□□ -0.37
PCDHA12-201ENST00000398631 SPANXA1Q9NS26 97 aa12.75□□□□□ -0.37
PCDHA12-201ENST00000398631 KLF12Q9Y4X4 402 aa12.75□□□□□ -0.37
PCDHA12-201ENST00000398631 TRAV8-3A0A0A6YYJ7 113 aa12.75□□□□□ -0.37
PCDHA12-201ENST00000398631 VWC2Q2TAL6 325 aa12.75□□□□□ -0.37
PCDHA12-201ENST00000398631 KRTAP27-1Q3LI81 207 aa12.75□□□□□ -0.37
PCDHA12-201ENST00000398631 MRPL53Q96EL3 112 aaKnown RBP12.75□□□□□ -0.37
PCDHA12-201ENST00000398631 FOXE3Q13461 319 aa12.75□□□□□ -0.37
PCDHA12-201ENST00000398631 AGPAT4-IT1Q9H0P7 198 aa12.75□□□□□ -0.37
PCDHA12-201ENST00000398631 IGHV7-81A0A0B4J1V7 117 aa12.74□□□□□ -0.37
PCDHA12-201ENST00000398631 A0A1B0GUS0 222 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms