RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 TP53TG1Q9Y2A0 90 aa8.76□□□□□ -1.01
HPS4-202ENST00000398145 ZNF688P0C7X2 276 aa8.75□□□□□ -1.01
HPS4-202ENST00000398145 KAAG1Q9UBP8 84 aa8.75□□□□□ -1.01
HPS4-202ENST00000398145 DYSFO75923 2080 aa8.75□□□□□ -1.01
HPS4-202ENST00000398145 A0A087WWL8 130 aa8.75□□□□□ -1.01
HPS4-202ENST00000398145 ITLN2Q8WWU7 325 aaPredicted RBP8.75□□□□□ -1.01
HPS4-202ENST00000398145 ZNF503Q96F45 646 aa8.75□□□□□ -1.01
HPS4-202ENST00000398145 TP53TG3Q9ULZ0 132 aa8.75□□□□□ -1.01
HPS4-202ENST00000398145 A0A087WX48 190 aa8.75□□□□□ -1.01
HPS4-202ENST00000398145 FCN3O75636 299 aa8.75□□□□□ -1.01
HPS4-202ENST00000398145 IGKV1-17P01599 117 aa8.75□□□□□ -1.01
HPS4-202ENST00000398145 PMVKQ15126 192 aa8.75□□□□□ -1.01
HPS4-202ENST00000398145 C2orf16Q68DN1 1984 aa8.74□□□□□ -1.01
HPS4-202ENST00000398145 MORN3Q6PF18 240 aaPredicted RBP8.74□□□□□ -1.01
HPS4-202ENST00000398145 OR11H6Q8NGC7 330 aa8.74□□□□□ -1.01
HPS4-202ENST00000398145 FAM110DQ8TAY7 271 aaPredicted RBP8.74□□□□□ -1.01
HPS4-202ENST00000398145 TMEM131Q92545 1883 aa8.74□□□□□ -1.01
HPS4-202ENST00000398145 SPRNQ5BIV9 151 aa8.74□□□□□ -1.01
HPS4-202ENST00000398145 IGLV2-8P01709 118 aa8.74□□□□□ -1.01
HPS4-202ENST00000398145 SHISA9B4DS77 424 aa8.74□□□□□ -1.01
HPS4-202ENST00000398145 NPC2P61916 151 aa8.74□□□□□ -1.01
HPS4-202ENST00000398145 CTRLP40313 264 aa8.73□□□□□ -1.01
HPS4-202ENST00000398145 CR1LQ2VPA4 569 aa8.73□□□□□ -1.01
HPS4-202ENST00000398145 C8orf86Q6ZUL3 223 aa8.73□□□□□ -1.01
HPS4-202ENST00000398145 BOD1L2Q8IYS8 172 aa8.73□□□□□ -1.01
HPS4-202ENST00000398145 TIMM21Q9BVV7 248 aa8.73□□□□□ -1.01
HPS4-202ENST00000398145 RHPN1-AS1Q9BWJ2 59 aa8.73□□□□□ -1.01
HPS4-202ENST00000398145 FAM215AQ9Y5M1 114 aa8.73□□□□□ -1.01
HPS4-202ENST00000398145 INS-IGF2F8WCM5 200 aa8.73□□□□□ -1.01
HPS4-202ENST00000398145 CCL19Q99731 98 aa8.73□□□□□ -1.01
HPS4-202ENST00000398145 SPXQ9BT56 116 aa8.73□□□□□ -1.01
HPS4-202ENST00000398145 ATP6V0E1O15342 81 aa8.73□□□□□ -1.01
HPS4-202ENST00000398145 USMG5Q96IX5 58 aa8.73□□□□□ -1.01
HPS4-202ENST00000398145 PRO1854Q9UHT4 67 aa8.73□□□□□ -1.01
HPS4-202ENST00000398145 A0A1B0GXF2 115 aa8.72□□□□□ -1.01
HPS4-202ENST00000398145 C1orf122Q6ZSJ8 110 aa8.72□□□□□ -1.01
HPS4-202ENST00000398145 LY6G5BQ8NDX9 201 aa8.72□□□□□ -1.01
HPS4-202ENST00000398145 TMEM141Q96I45 108 aa8.72□□□□□ -1.01
HPS4-202ENST00000398145 FAM223BA6NKX1 122 aa8.72□□□□□ -1.01
HPS4-202ENST00000398145 SAA4P35542 130 aa8.72□□□□□ -1.01
HPS4-202ENST00000398145 SH2D6Q7Z4S9 175 aa8.72□□□□□ -1.01
HPS4-202ENST00000398145 FAM223AQ8IWN6 122 aa8.72□□□□□ -1.01
HPS4-202ENST00000398145 NEGR1Q7Z3B1 354 aa8.72□□□□□ -1.01
HPS4-202ENST00000398145 TNRC6AQ8NDV7 1962 aaKnown RBP8.72□□□□□ -1.01
HPS4-202ENST00000398145 C20orf78Q9BR46 151 aa8.72□□□□□ -1.01
HPS4-202ENST00000398145 MRPL36Q9P0J6 103 aaKnown RBP8.72□□□□□ -1.01
HPS4-202ENST00000398145 CTSZQ9UBR2 303 aa8.72□□□□□ -1.01
HPS4-202ENST00000398145 C19orf71A6NCJ1 209 aa8.72□□□□□ -1.01
HPS4-202ENST00000398145 IGLL5B9A064 214 aa8.72□□□□□ -1.01
HPS4-202ENST00000398145 HLA-DMBP28068 263 aa8.72□□□□□ -1.01
HPS4-202ENST00000398145 FXYD2P54710 66 aa8.72□□□□□ -1.01
HPS4-202ENST00000398145 SDHAF1A6NFY7 115 aa8.71□□□□□ -1.01
HPS4-202ENST00000398145 FOXI2Q6ZQN5 318 aa8.71□□□□□ -1.01
HPS4-202ENST00000398145 SPATA12Q7Z6I5 190 aa8.71□□□□□ -1.01
HPS4-202ENST00000398145 RBMY1BA6NDE4 496 aaKnown RBP8.71□□□□□ -1.02
HPS4-202ENST00000398145 RBMY1EA6NEQ0 496 aaKnown RBP8.71□□□□□ -1.02
HPS4-202ENST00000398145 E7EUB6 86 aa8.71□□□□□ -1.02
HPS4-202ENST00000398145 RBMY1DP0C7P1 496 aaKnown RBP8.71□□□□□ -1.02
HPS4-202ENST00000398145 RBMY1A1P0DJD3 496 aaKnown RBP8.71□□□□□ -1.02
HPS4-202ENST00000398145 RBMY1CP0DJD4 496 aa8.71□□□□□ -1.02
HPS4-202ENST00000398145 GATA1P15976 413 aaPredicted RBP8.71□□□□□ -1.02
HPS4-202ENST00000398145 SPANXA1Q9NS26 97 aa8.71□□□□□ -1.02
HPS4-202ENST00000398145 ZFHX2Q9C0A1 2572 aaPredicted RBP8.71□□□□□ -1.02
HPS4-202ENST00000398145 TRAV8-3A0A0A6YYJ7 113 aa8.71□□□□□ -1.02
HPS4-202ENST00000398145 G3V318 75 aa8.71□□□□□ -1.02
HPS4-202ENST00000398145 IGFL3Q6UXB1 125 aa8.71□□□□□ -1.02
HPS4-202ENST00000398145 DYNAPQ8N1N2 210 aa8.71□□□□□ -1.02
HPS4-202ENST00000398145 I3L2K1 104 aa8.7□□□□□ -1.02
HPS4-202ENST00000398145 GDF5OSQ5U4N7 250 aa8.7□□□□□ -1.02
HPS4-202ENST00000398145 MSRB1Q9NZV6 116 aa8.7□□□□□ -1.02
HPS4-202ENST00000398145 HIGD1BQ9P298 99 aa8.7□□□□□ -1.02
HPS4-202ENST00000398145 IGHV3-73A0A0B4J1V6 119 aa8.7□□□□□ -1.02
HPS4-202ENST00000398145 K7EIM0 57 aa8.7□□□□□ -1.02
HPS4-202ENST00000398145 FGF6P10767 208 aa8.7□□□□□ -1.02
HPS4-202ENST00000398145 TTTY13Q9BZ97 58 aa8.7□□□□□ -1.02
HPS4-202ENST00000398145 AGPAT4-IT1Q9H0P7 198 aa8.7□□□□□ -1.02
HPS4-202ENST00000398145 DAZ1Q9NQZ3 744 aaKnown RBP8.7□□□□□ -1.02
HPS4-202ENST00000398145 TRPT1Q86TN4 253 aaKnown RBP8.7□□□□□ -1.02
HPS4-202ENST00000398145 MBD6Q96DN6 1003 aa8.7□□□□□ -1.02
HPS4-202ENST00000398145 PRSS22Q9GZN4 317 aa8.7□□□□□ -1.02
HPS4-202ENST00000398145 CENPFP49454 3210 aa8.7□□□□□ -1.02
HPS4-202ENST00000398145 TRGV2A0A075B6R0 118 aa8.7□□□□□ -1.02
HPS4-202ENST00000398145 PRSS29PA6NIE9 313 aa8.7□□□□□ -1.02
HPS4-202ENST00000398145 H3BUX3 64 aa8.7□□□□□ -1.02
HPS4-202ENST00000398145 OVOL3O00110 214 aa8.7□□□□□ -1.02
HPS4-202ENST00000398145 ANXA2RQ3ZCQ2 193 aa8.7□□□□□ -1.02
HPS4-202ENST00000398145 EIF4EBP1Q13541 118 aaPredicted RBP8.69□□□□□ -1.02
HPS4-202ENST00000398145 WFDC2Q14508 124 aa8.69□□□□□ -1.02
HPS4-202ENST00000398145 BRD3OSQ6XYD6 125 aa8.69□□□□□ -1.02
HPS4-202ENST00000398145 H3BMM0 161 aa8.69□□□□□ -1.02
HPS4-202ENST00000398145 SLC25A20O43772 301 aa8.69□□□□□ -1.02
HPS4-202ENST00000398145 UBE2WQ96B02 151 aa8.69□□□□□ -1.02
HPS4-202ENST00000398145 PTPRQQ9UMZ3 2332 aa8.69□□□□□ -1.02
HPS4-202ENST00000398145 PEMTQ9UBM1 199 aa8.69□□□□□ -1.02
HPS4-202ENST00000398145 G3V4G9 280 aa8.68□□□□□ -1.02
HPS4-202ENST00000398145 J3QQQ9 107 aa8.68□□□□□ -1.02
HPS4-202ENST00000398145 K7EMI3 77 aa8.68□□□□□ -1.02
HPS4-202ENST00000398145 UBE2E1P51965 193 aa8.68□□□□□ -1.02
HPS4-202ENST00000398145 LTBP2Q14767 1821 aa8.68□□□□□ -1.02
HPS4-202ENST00000398145 TCF15Q12870 199 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms