RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 ORMDL2Q53FV1 153 aa7.18□□□□□ -1.26
UCA1-201ENST00000397381 SMIM2Q9BVW6 85 aa7.18□□□□□ -1.26
UCA1-201ENST00000397381 IGHV7-4-1A0A0J9YVY3 117 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 TMEM238LA0A1B0GVL6 79 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 A6NJY4 79 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 LYNX1G3V0Z9 82 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 M0R1W7 72 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 CD3EP07766 207 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 LYNX1P0DP58 116 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 NDPQ00604 133 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 TMEM78Q5T7P6 136 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 AMTNQ6UX39 209 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 AGPAT4-IT1Q9H0P7 198 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 C11orf21Q9P2W6 132 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 UFC1Q9Y3C8 167 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 ROS1P08922 2347 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 OOSP1A8MZH6 123 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 APOMO95445 188 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 EFNA4P52798 201 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 CKS1BP61024 79 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 MORN3Q6PF18 240 aaPredicted RBP7.17□□□□□ -1.26
UCA1-201ENST00000397381 Q8N6K4 173 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 C1QTNF4Q9BXJ3 329 aa7.17□□□□□ -1.26
UCA1-201ENST00000397381 BUB3O43684 328 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 SPANXN1Q5VSR9 72 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 MTURNQ8N3F0 131 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 DLX4Q92988 240 aaPredicted RBP7.16□□□□□ -1.26
UCA1-201ENST00000397381 TOMM6Q96B49 74 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 SCGB3A1Q96QR1 104 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 ZFAND3Q9H8U3 227 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 RAXQ9Y2V3 346 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 RP1L1Q8IWN7 2480 aaPredicted RBP7.16□□□□□ -1.26
UCA1-201ENST00000397381 TRAV26-2A0A0B4J265 109 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 LGALS1P09382 135 aaKnown RBP7.16□□□□□ -1.26
UCA1-201ENST00000397381 PRTN3P24158 256 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 EBI3Q14213 229 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 KLK9Q2XQG4 91 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 LCNL1Q6ZST4 164 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 RNF182Q8N6D2 247 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 NEXN-AS1Q8NBZ9 246 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 C20orf78Q9BR46 151 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 KLK9Q9UKQ9 250 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 AGRNO00468 2067 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 PKDREJQ9NTG1 2253 aa7.16□□□□□ -1.26
UCA1-201ENST00000397381 FOXI1Q12951 378 aa7.15□□□□□ -1.26
UCA1-201ENST00000397381 KLRD1Q13241 179 aa7.15□□□□□ -1.26
UCA1-201ENST00000397381 LYRM7Q5U5X0 104 aa7.15□□□□□ -1.26
UCA1-201ENST00000397381 CFAP126Q5VTH2 177 aa7.15□□□□□ -1.26
UCA1-201ENST00000397381 C9orf47Q6ZRZ4 202 aa7.15□□□□□ -1.26
UCA1-201ENST00000397381 MRPL16Q9NX20 251 aaKnown RBP7.15□□□□□ -1.26
UCA1-201ENST00000397381 PGPEP1Q9NXJ5 209 aa7.15□□□□□ -1.26
UCA1-201ENST00000397381 SCGB2A2Q13296 93 aa7.15□□□□□ -1.27
UCA1-201ENST00000397381 FAM110DQ8TAY7 271 aaPredicted RBP7.15□□□□□ -1.27
UCA1-201ENST00000397381 VCX2Q9H322 139 aa7.15□□□□□ -1.27
UCA1-201ENST00000397381 CYSLTR1Q9Y271 337 aa7.15□□□□□ -1.27
UCA1-201ENST00000397381 COL6A3P12111 3177 aa7.14□□□□□ -1.27
UCA1-201ENST00000397381 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.14□□□□□ -1.27
UCA1-201ENST00000397381 INSL3P51460 131 aa7.14□□□□□ -1.27
UCA1-201ENST00000397381 UBE2D1P51668 147 aa7.14□□□□□ -1.27
UCA1-201ENST00000397381 SVIPQ8NHG7 77 aa7.14□□□□□ -1.27
UCA1-201ENST00000397381 LENEPQ9Y5L5 61 aa7.14□□□□□ -1.27
UCA1-201ENST00000397381 IGHV7-81A0A0B4J1V7 117 aa7.13□□□□□ -1.27
UCA1-201ENST00000397381 TRAV8-2A0A0B4J237 113 aa7.13□□□□□ -1.27
UCA1-201ENST00000397381 CENPVL3A0A0U1RRI6 287 aa7.13□□□□□ -1.27
UCA1-201ENST00000397381 SUMO2P61956 95 aaKnown RBP7.13□□□□□ -1.27
UCA1-201ENST00000397381 ATP5G2Q06055 141 aa7.13□□□□□ -1.27
UCA1-201ENST00000397381 MINOS1Q5TGZ0 78 aa7.13□□□□□ -1.27
UCA1-201ENST00000397381 C8orf86Q6ZUL3 223 aa7.13□□□□□ -1.27
UCA1-201ENST00000397381 PRADC1Q9BSG0 188 aa7.13□□□□□ -1.27
UCA1-201ENST00000397381 SH3BGRL2Q9UJC5 107 aa7.13□□□□□ -1.27
UCA1-201ENST00000397381 MINOS1-NBL1R4GNA1 71 aa7.13□□□□□ -1.27
UCA1-201ENST00000397381 IGHV3OR16-8A0A075B7F1 116 aa7.13□□□□□ -1.27
UCA1-201ENST00000397381 M0R381 172 aa7.13□□□□□ -1.27
UCA1-201ENST00000397381 TNRC18O15417 2968 aaPredicted RBP7.13□□□□□ -1.27
UCA1-201ENST00000397381 C15orf32Q32M92 178 aa7.13□□□□□ -1.27
UCA1-201ENST00000397381 C1orf122Q6ZSJ8 110 aa7.13□□□□□ -1.27
UCA1-201ENST00000397381 DEFB123Q8N688 67 aa7.13□□□□□ -1.27
UCA1-201ENST00000397381 ZNF418Q8TF45 676 aaPredicted RBP7.13□□□□□ -1.27
UCA1-201ENST00000397381 TIMD4Q96H15 378 aa7.13□□□□□ -1.27
UCA1-201ENST00000397381 IGHV3-35A0A0C4DH35 117 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 CLPSL1A2RUU4 121 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 ZNF815PA8K554 130 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 H3BVH4 76 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 PPP1R17O96001 155 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 SMCPP49901 116 aaPredicted RBP7.12□□□□□ -1.27
UCA1-201ENST00000397381 VMO1Q7Z5L0 202 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 SYT8Q8NBV8 401 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 BAALCQ8WXS3 180 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 METTL26Q96S19 204 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 CDIP1Q9H305 208 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 DPH3P1Q9H4G8 78 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 MSRB2Q9Y3D2 182 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 LINC01549A6NIU2 74 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 CLEC3BP05452 202 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 CRYBA4P53673 196 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 UBE2D3P61077 147 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 UBE2D2P62837 147 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 PAPPA-AS1Q5QFB9 102 aa7.12□□□□□ -1.27
UCA1-201ENST00000397381 SCGB1D4Q6XE38 83 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms