RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 SFRP2Q96HF1 295 aa10.58□□□□□ -0.72
SEC13-208ENST00000397109 DERL1Q9BUN8 251 aa10.58□□□□□ -0.72
SEC13-208ENST00000397109 TRAV9-1A0A075B6T8 112 aa10.57□□□□□ -0.72
SEC13-208ENST00000397109 LOC105371267A0A1B0GV96 52 aa10.57□□□□□ -0.72
SEC13-208ENST00000397109 PGPA6NDG6 321 aa10.57□□□□□ -0.72
SEC13-208ENST00000397109 PEX7O00628 323 aa10.57□□□□□ -0.72
SEC13-208ENST00000397109 ZNF253O75346 499 aa10.57□□□□□ -0.72
SEC13-208ENST00000397109 TMEM183BQ1AE95 376 aa10.57□□□□□ -0.72
SEC13-208ENST00000397109 GDF5OSQ5U4N7 250 aa10.57□□□□□ -0.72
SEC13-208ENST00000397109 CEMP1Q6PRD7 247 aaPredicted RBP10.57□□□□□ -0.72
SEC13-208ENST00000397109 Q8NAQ8 132 aa10.57□□□□□ -0.72
SEC13-208ENST00000397109 C11orf45Q8TAV5 145 aa10.57□□□□□ -0.72
SEC13-208ENST00000397109 ATG101Q9BSB4 218 aa10.57□□□□□ -0.72
SEC13-208ENST00000397109 BIN3Q9NQY0 253 aa10.57□□□□□ -0.72
SEC13-208ENST00000397109 CLEC5AQ9NY25 188 aa10.57□□□□□ -0.72
SEC13-208ENST00000397109 XCL2Q9UBD3 114 aa10.57□□□□□ -0.72
SEC13-208ENST00000397109 KLK5Q9Y337 293 aaPredicted RBP10.57□□□□□ -0.72
SEC13-208ENST00000397109 LYSTQ99698 3801 aa10.57□□□□□ -0.72
SEC13-208ENST00000397109 TRBV19A0A075B6N1 114 aa10.56□□□□□ -0.72
SEC13-208ENST00000397109 A0A0J9YX75 114 aa10.56□□□□□ -0.72
SEC13-208ENST00000397109 TRBV6-1A0A0K0K1D8 114 aa10.56□□□□□ -0.72
SEC13-208ENST00000397109 GCGP01275 180 aa10.56□□□□□ -0.72
SEC13-208ENST00000397109 RANP62826 216 aaKnown RBP10.56□□□□□ -0.72
SEC13-208ENST00000397109 OR4B1Q8NGF8 309 aa10.56□□□□□ -0.72
SEC13-208ENST00000397109 OR10G8Q8NGN5 311 aa10.56□□□□□ -0.72
SEC13-208ENST00000397109 FMC1Q96HJ9 113 aa10.56□□□□□ -0.72
SEC13-208ENST00000397109 OSTCQ9NRP0 149 aa10.56□□□□□ -0.72
SEC13-208ENST00000397109 IGHV4-28A0A0C4DH34 117 aa10.55□□□□□ -0.72
SEC13-208ENST00000397109 SERTM2A0A1B0GWG4 89 aa10.55□□□□□ -0.72
SEC13-208ENST00000397109 IGKV3-20P01619 116 aa10.55□□□□□ -0.72
SEC13-208ENST00000397109 SLC25A5P05141 298 aaKnown RBP10.55□□□□□ -0.72
SEC13-208ENST00000397109 DEFB1P60022 68 aa10.55□□□□□ -0.72
SEC13-208ENST00000397109 RPL19P84098 196 aaKnown RBP10.55□□□□□ -0.72
SEC13-208ENST00000397109 PSG9Q00887 426 aa10.55□□□□□ -0.72
SEC13-208ENST00000397109 CENPWQ5EE01 88 aa10.55□□□□□ -0.72
SEC13-208ENST00000397109 PHLDA1Q8WV24 401 aaPredicted RBP10.55□□□□□ -0.72
SEC13-208ENST00000397109 FAM210BQ96KR6 192 aa10.55□□□□□ -0.72
SEC13-208ENST00000397109 C20orf173Q96LM9 149 aa10.55□□□□□ -0.72
SEC13-208ENST00000397109 IGF2BP2-AS1Q96M15 143 aa10.55□□□□□ -0.72
SEC13-208ENST00000397109 Q9H3A6 140 aa10.55□□□□□ -0.72
SEC13-208ENST00000397109 ZNF586Q9NXT0 402 aa10.55□□□□□ -0.72
SEC13-208ENST00000397109 X6R8D5 127 aa10.55□□□□□ -0.72
SEC13-208ENST00000397109 FBLL1A6NHQ2 334 aaKnown RBP10.55□□□□□ -0.72
SEC13-208ENST00000397109 DEFB4AO15263 64 aa10.55□□□□□ -0.72
SEC13-208ENST00000397109 DUSP14O95147 198 aaKnown RBP10.55□□□□□ -0.72
SEC13-208ENST00000397109 FAM231DQ6ZW35 169 aa10.55□□□□□ -0.72
SEC13-208ENST00000397109 CMTM2Q8TAZ6 248 aa10.55□□□□□ -0.72
SEC13-208ENST00000397109 BLNKQ8WV28 456 aa10.55□□□□□ -0.72
SEC13-208ENST00000397109 RYR3Q15413 4870 aa10.54□□□□□ -0.72
SEC13-208ENST00000397109 F6UB75 175 aa10.54□□□□□ -0.72
SEC13-208ENST00000397109 K7EQM0 130 aa10.54□□□□□ -0.72
SEC13-208ENST00000397109 TYMSP04818 313 aa10.54□□□□□ -0.72
SEC13-208ENST00000397109 RBMY1A1P0DJD3 496 aaKnown RBP10.54□□□□□ -0.72
SEC13-208ENST00000397109 RBMY1CP0DJD4 496 aa10.54□□□□□ -0.72
SEC13-208ENST00000397109 UBE2G1P62253 170 aa10.54□□□□□ -0.72
SEC13-208ENST00000397109 RBMY1FQ15415 496 aaKnown RBP10.54□□□□□ -0.72
SEC13-208ENST00000397109 NEU1Q99519 415 aa10.54□□□□□ -0.72
SEC13-208ENST00000397109 SLC50A1Q9BRV3 221 aa10.54□□□□□ -0.72
SEC13-208ENST00000397109 ZNF331Q9NQX6 463 aaPredicted RBP10.54□□□□□ -0.72
SEC13-208ENST00000397109 URGCP-MRPS24S4R325 110 aa10.54□□□□□ -0.72
SEC13-208ENST00000397109 TRAV8-2A0A0B4J237 113 aa10.53□□□□□ -0.72
SEC13-208ENST00000397109 A8MTW9 85 aa10.53□□□□□ -0.72
SEC13-208ENST00000397109 TCRAP04437 139 aa10.53□□□□□ -0.72
SEC13-208ENST00000397109 CXCL1P09341 107 aa10.53□□□□□ -0.72
SEC13-208ENST00000397109 RPS10P46783 165 aaKnown RBP10.53□□□□□ -0.72
SEC13-208ENST00000397109 FAM3BP58499 235 aaPredicted RBP10.53□□□□□ -0.72
SEC13-208ENST00000397109 NANOS2P60321 138 aaKnown RBP10.53□□□□□ -0.72
SEC13-208ENST00000397109 ZNF705AQ6ZN79 300 aaPredicted RBP10.53□□□□□ -0.72
SEC13-208ENST00000397109 BAGE2Q86Y30 109 aa10.53□□□□□ -0.72
SEC13-208ENST00000397109 ZNF738Q8NE65 137 aa10.53□□□□□ -0.72
SEC13-208ENST00000397109 AAMDCQ9H7C9 122 aa10.53□□□□□ -0.72
SEC13-208ENST00000397109 SACSQ9NZJ4 4579 aa10.52□□□□□ -0.72
SEC13-208ENST00000397109 TGIF2-C20orf24A0A0A6YYL0 155 aa10.52□□□□□ -0.73
SEC13-208ENST00000397109 SMIM9A6NGZ8 99 aa10.52□□□□□ -0.73
SEC13-208ENST00000397109 K7EN84 100 aa10.52□□□□□ -0.73
SEC13-208ENST00000397109 SLC17A3O00476 420 aa10.52□□□□□ -0.73
SEC13-208ENST00000397109 IGLV2-8P01709 118 aa10.52□□□□□ -0.73
SEC13-208ENST00000397109 AMBPP02760 352 aa10.52□□□□□ -0.73
SEC13-208ENST00000397109 FXYD7P58549 80 aa10.52□□□□□ -0.73
SEC13-208ENST00000397109 ERVFC1-1P60608 527 aa10.52□□□□□ -0.73
SEC13-208ENST00000397109 PSG3Q16557 428 aa10.52□□□□□ -0.73
SEC13-208ENST00000397109 IGFL4Q6B9Z1 124 aa10.52□□□□□ -0.73
SEC13-208ENST00000397109 IL36BQ9NZH7 164 aa10.52□□□□□ -0.73
SEC13-208ENST00000397109 ZNF705FA8MVS1 300 aaPredicted RBP10.51□□□□□ -0.73
SEC13-208ENST00000397109 ZNF705DP0CH99 300 aaPredicted RBP10.51□□□□□ -0.73
SEC13-208ENST00000397109 ZNF705BP0CI00 300 aaPredicted RBP10.51□□□□□ -0.73
SEC13-208ENST00000397109 COX19Q49B96 90 aa10.51□□□□□ -0.73
SEC13-208ENST00000397109 RNF182Q8N6D2 247 aa10.51□□□□□ -0.73
SEC13-208ENST00000397109 GOLT1BQ9Y3E0 138 aa10.51□□□□□ -0.73
SEC13-208ENST00000397109 TMEM189A5PLL7 270 aa10.5□□□□□ -0.73
SEC13-208ENST00000397109 PGPEP1LA6NFU8 196 aa10.5□□□□□ -0.73
SEC13-208ENST00000397109 LTAP01374 205 aa10.5□□□□□ -0.73
SEC13-208ENST00000397109 CSN1S1P47710 185 aa10.5□□□□□ -0.73
SEC13-208ENST00000397109 TMEM75Q8N9X5 138 aa10.5□□□□□ -0.73
SEC13-208ENST00000397109 MLST8Q9BVC4 326 aa10.5□□□□□ -0.73
SEC13-208ENST00000397109 ZFP30Q9Y2G7 519 aa10.5□□□□□ -0.73
SEC13-208ENST00000397109 H3BTX0 84 aa10.49□□□□□ -0.73
SEC13-208ENST00000397109 S100A6P06703 90 aa10.49□□□□□ -0.73
SEC13-208ENST00000397109 SNRPCP09234 159 aaKnown RBP10.49□□□□□ -0.73
SEC13-208ENST00000397109 IBA57Q5T440 356 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms