RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 SOHLH1Q5JUK2 328 aa9.79□□□□□ -0.84
SEC13-204ENST00000397099 Q6AWC8 147 aa9.79□□□□□ -0.84
SEC13-204ENST00000397099 C11orf72Q8NBR9 251 aa9.79□□□□□ -0.84
SEC13-204ENST00000397099 SUN5Q8TC36 379 aa9.79□□□□□ -0.84
SEC13-204ENST00000397099 HYLS1Q96M11 299 aa9.79□□□□□ -0.84
SEC13-204ENST00000397099 ACTR3CQ9C0K3 210 aaPredicted RBP9.79□□□□□ -0.84
SEC13-204ENST00000397099 GAGE12BA1L429 117 aa9.78□□□□□ -0.84
SEC13-204ENST00000397099 M0R2N4 97 aa9.78□□□□□ -0.84
SEC13-204ENST00000397099 SPINK4O60575 86 aa9.78□□□□□ -0.84
SEC13-204ENST00000397099 GAGE7O76087 117 aa9.78□□□□□ -0.84
SEC13-204ENST00000397099 GAGE12FP0CL80 117 aa9.78□□□□□ -0.84
SEC13-204ENST00000397099 GAGE12GP0CL81 117 aa9.78□□□□□ -0.84
SEC13-204ENST00000397099 GAGE12IP0CL82 117 aa9.78□□□□□ -0.84
SEC13-204ENST00000397099 ARL14EPLP0DKL9 152 aa9.78□□□□□ -0.84
SEC13-204ENST00000397099 ZNF415Q09FC8 603 aa9.78□□□□□ -0.84
SEC13-204ENST00000397099 SLAQ13239 276 aa9.78□□□□□ -0.84
SEC13-204ENST00000397099 OR5I1Q13606 314 aa9.78□□□□□ -0.84
SEC13-204ENST00000397099 FAM159AQ6UWV7 190 aa9.78□□□□□ -0.84
SEC13-204ENST00000397099 C5orf17Q8NAS9 161 aa9.78□□□□□ -0.84
SEC13-204ENST00000397099 RAB24Q969Q5 203 aa9.78□□□□□ -0.84
SEC13-204ENST00000397099 NDFIP1Q9BT67 221 aa9.78□□□□□ -0.84
SEC13-204ENST00000397099 GSN-AS1Q9NRJ2 163 aa9.78□□□□□ -0.84
SEC13-204ENST00000397099 TRGV11A0A075B6L2 103 aa9.77□□□□□ -0.85
SEC13-204ENST00000397099 RNF222A6NCQ9 220 aa9.77□□□□□ -0.85
SEC13-204ENST00000397099 NUDT3O95989 172 aa9.77□□□□□ -0.85
SEC13-204ENST00000397099 TDRG1Q3Y452 100 aa9.77□□□□□ -0.85
SEC13-204ENST00000397099 Q5BKY6 102 aa9.77□□□□□ -0.85
SEC13-204ENST00000397099 Q8TAT8 98 aa9.77□□□□□ -0.85
SEC13-204ENST00000397099 SPXQ9BT56 116 aa9.77□□□□□ -0.85
SEC13-204ENST00000397099 NKX6-2Q9C056 277 aaPredicted RBP9.77□□□□□ -0.85
SEC13-204ENST00000397099 TP53TG3Q9ULZ0 132 aa9.77□□□□□ -0.85
SEC13-204ENST00000397099 KLF12Q9Y4X4 402 aa9.77□□□□□ -0.85
SEC13-204ENST00000397099 TRAV26-1A0A087WT03 109 aa9.76□□□□□ -0.85
SEC13-204ENST00000397099 TRGV1A0A0A0MS02 117 aa9.76□□□□□ -0.85
SEC13-204ENST00000397099 TRAV21A0A0B4J279 112 aa9.76□□□□□ -0.85
SEC13-204ENST00000397099 GCHFRP30047 84 aa9.76□□□□□ -0.85
SEC13-204ENST00000397099 Q6ZTI0 123 aa9.76□□□□□ -0.85
SEC13-204ENST00000397099 GOLT1AQ6ZVE7 132 aa9.76□□□□□ -0.85
SEC13-204ENST00000397099 DNAH17Q9UFH2 4485 aa9.76□□□□□ -0.85
SEC13-204ENST00000397099 NACAE9PAV3 2078 aa9.76□□□□□ -0.85
SEC13-204ENST00000397099 PRR9Q5T870 116 aa9.75□□□□□ -0.85
SEC13-204ENST00000397099 RPL7L1Q6DKI1 246 aaKnown RBP9.75□□□□□ -0.85
SEC13-204ENST00000397099 KCNS1Q96KK3 526 aa9.75□□□□□ -0.85
SEC13-204ENST00000397099 MUC4Q99102 2169 aa9.75□□□□□ -0.85
SEC13-204ENST00000397099 FAT2Q9NYQ8 4349 aa9.74□□□□□ -0.85
SEC13-204ENST00000397099 IGLV2-18A0A075B6J9 118 aa9.74□□□□□ -0.85
SEC13-204ENST00000397099 CTXND1A0A1B0GTU2 59 aa9.74□□□□□ -0.85
SEC13-204ENST00000397099 A0A1W2PRE2 83 aa9.74□□□□□ -0.85
SEC13-204ENST00000397099 HMGB3O15347 200 aaKnown RBP9.74□□□□□ -0.85
SEC13-204ENST00000397099 ZNF345Q14585 488 aa9.74□□□□□ -0.85
SEC13-204ENST00000397099 AKR1C8PQ5T2L2 129 aa9.74□□□□□ -0.85
SEC13-204ENST00000397099 Q6ZR54 194 aa9.74□□□□□ -0.85
SEC13-204ENST00000397099 SH3BGRL3Q9H299 93 aa9.74□□□□□ -0.85
SEC13-204ENST00000397099 TMPRSS5Q9H3S3 457 aa9.74□□□□□ -0.85
SEC13-204ENST00000397099 TREM1Q9NP99 234 aa9.74□□□□□ -0.85
SEC13-204ENST00000397099 RPH3ALQ9UNE2 315 aa9.74□□□□□ -0.85
SEC13-204ENST00000397099 ARPC5O15511 151 aa9.73□□□□□ -0.85
SEC13-204ENST00000397099 TCRAP04437 139 aa9.73□□□□□ -0.85
SEC13-204ENST00000397099 ZFP69Q49AA0 526 aa9.73□□□□□ -0.85
SEC13-204ENST00000397099 SAPCD1Q5SSQ6 148 aa9.73□□□□□ -0.85
SEC13-204ENST00000397099 PRSS29PA6NIE9 313 aa9.72□□□□□ -0.85
SEC13-204ENST00000397099 HMSDA8MTL9 139 aa9.72□□□□□ -0.85
SEC13-204ENST00000397099 HOXA5P20719 270 aa9.72□□□□□ -0.85
SEC13-204ENST00000397099 PPT1P50897 306 aa9.72□□□□□ -0.85
SEC13-204ENST00000397099 SUMO1P63165 101 aaKnown RBP9.72□□□□□ -0.85
SEC13-204ENST00000397099 CYB561D1Q8N8Q1 229 aa9.72□□□□□ -0.85
SEC13-204ENST00000397099 TMEM75Q8N9X5 138 aa9.72□□□□□ -0.85
SEC13-204ENST00000397099 RASL10AQ92737 203 aa9.72□□□□□ -0.85
SEC13-204ENST00000397099 PRO0255Q9UI72 69 aa9.72□□□□□ -0.85
SEC13-204ENST00000397099 EPDR1Q9UM22 224 aa9.72□□□□□ -0.85
SEC13-204ENST00000397099 G3V3Q6 166 aa9.71□□□□□ -0.86
SEC13-204ENST00000397099 EIF3GO75821 320 aaKnown RBP eCLIP9.71□□□□□ -0.86
SEC13-204ENST00000397099 BTF3P20290 206 aaKnown RBP9.71□□□□□ -0.86
SEC13-204ENST00000397099 TTC32Q5I0X7 151 aa9.71□□□□□ -0.86
SEC13-204ENST00000397099 MUC21Q5SSG8 566 aa9.71□□□□□ -0.86
SEC13-204ENST00000397099 C1orf134Q5TEV5 83 aa9.71□□□□□ -0.86
SEC13-204ENST00000397099 SSX7Q7RTT5 188 aa9.71□□□□□ -0.86
SEC13-204ENST00000397099 IQCF2Q8IXL9 164 aa9.71□□□□□ -0.86
SEC13-204ENST00000397099 ZNRF2Q8NHG8 242 aa9.71□□□□□ -0.86
SEC13-204ENST00000397099 STOML3Q8TAV4 291 aa9.71□□□□□ -0.86
SEC13-204ENST00000397099 TCEAL7Q9BRU2 100 aa9.71□□□□□ -0.86
SEC13-204ENST00000397099 UPK3BQ9BT76 320 aa9.71□□□□□ -0.86
SEC13-204ENST00000397099 SDF2L1Q9HCN8 221 aa9.71□□□□□ -0.86
SEC13-204ENST00000397099 LINC00588Q9Y4M8 146 aa9.71□□□□□ -0.86
SEC13-204ENST00000397099 PKHD1P08F94 4074 aa9.7□□□□□ -0.86
SEC13-204ENST00000397099 A0A0D9SG52 128 aa9.7□□□□□ -0.86
SEC13-204ENST00000397099 A0A0J9YY99 117 aa9.7□□□□□ -0.86
SEC13-204ENST00000397099 NBDYA0A0U1RRE5 68 aa9.7□□□□□ -0.86
SEC13-204ENST00000397099 CIDEAO60543 219 aa9.7□□□□□ -0.86
SEC13-204ENST00000397099 GNG5P63218 68 aa9.7□□□□□ -0.86
SEC13-204ENST00000397099 EIF5AP63241 154 aaKnown RBP9.7□□□□□ -0.86
SEC13-204ENST00000397099 FLI1Q01543 452 aaPredicted RBP9.7□□□□□ -0.86
SEC13-204ENST00000397099 TMEM183BQ1AE95 376 aa9.7□□□□□ -0.86
SEC13-204ENST00000397099 SMUG1Q53HV7 270 aa9.7□□□□□ -0.86
SEC13-204ENST00000397099 TMEM183AQ8IXX5 376 aa9.7□□□□□ -0.86
SEC13-204ENST00000397099 KCNRGQ8N5I3 272 aa9.7□□□□□ -0.86
SEC13-204ENST00000397099 HIST1H2BAQ96A08 127 aa9.7□□□□□ -0.86
SEC13-204ENST00000397099 PSG8Q9UQ74 426 aa9.7□□□□□ -0.86
SEC13-204ENST00000397099 TRAV8-1A0A0A6YYK1 113 aa9.69□□□□□ -0.86
SEC13-204ENST00000397099 A0A1W2PPQ1 181 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 179.7 ms