RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 VSIG2Q96IQ7 327 aa11.31□□□□□ -0.6
DDR1-229ENST00000396342 FAM19A4Q96LR4 140 aa11.31□□□□□ -0.6
DDR1-229ENST00000396342 ATP5SQ99766 215 aa11.31□□□□□ -0.6
DDR1-229ENST00000396342 SPXQ9BT56 116 aa11.31□□□□□ -0.6
DDR1-229ENST00000396342 WDR61Q9GZS3 305 aaKnown RBP11.31□□□□□ -0.6
DDR1-229ENST00000396342 K7EP13 123 aa11.3□□□□□ -0.6
DDR1-229ENST00000396342 ORM1P02763 201 aa11.3□□□□□ -0.6
DDR1-229ENST00000396342 EVI2AP22794 236 aa11.3□□□□□ -0.6
DDR1-229ENST00000396342 C8orf49Q96NF6 230 aa11.3□□□□□ -0.6
DDR1-229ENST00000396342 PGPEP1Q9NXJ5 209 aa11.3□□□□□ -0.6
DDR1-229ENST00000396342 LENEPQ9Y5L5 61 aa11.3□□□□□ -0.6
DDR1-229ENST00000396342 NACAE9PAV3 2078 aa11.29□□□□□ -0.6
DDR1-229ENST00000396342 A0A1W2PPV4 95 aa11.29□□□□□ -0.6
DDR1-229ENST00000396342 SIX6O95475 246 aa11.29□□□□□ -0.6
DDR1-229ENST00000396342 LINC00315P59091 139 aa11.29□□□□□ -0.6
DDR1-229ENST00000396342 DEFA1P59665 94 aa11.29□□□□□ -0.6
DDR1-229ENST00000396342 DEFA3P59666 94 aa11.29□□□□□ -0.6
DDR1-229ENST00000396342 FFAR4Q5NUL3 377 aa11.29□□□□□ -0.6
DDR1-229ENST00000396342 ZFAND2AQ8N6M9 145 aa11.29□□□□□ -0.6
DDR1-229ENST00000396342 HYLS1Q96M11 299 aa11.29□□□□□ -0.6
DDR1-229ENST00000396342 TXNDC17Q9BRA2 123 aa11.29□□□□□ -0.6
DDR1-229ENST00000396342 LY96Q9Y6Y9 160 aa11.29□□□□□ -0.6
DDR1-229ENST00000396342 INMT-MINDY4F8WBC2 141 aa11.28□□□□□ -0.6
DDR1-229ENST00000396342 ZNF266Q14584 549 aa11.28□□□□□ -0.6
DDR1-229ENST00000396342 MUC21Q5SSG8 566 aa11.28□□□□□ -0.6
DDR1-229ENST00000396342 SH2D6Q7Z4S9 175 aa11.28□□□□□ -0.6
DDR1-229ENST00000396342 FAM167A-AS1Q96KT0 104 aa11.28□□□□□ -0.6
DDR1-229ENST00000396342 SCRT2Q9NQ03 307 aa11.28□□□□□ -0.6
DDR1-229ENST00000396342 NAGKQ9UJ70 344 aa11.28□□□□□ -0.6
DDR1-229ENST00000396342 BOLA1Q9Y3E2 137 aa11.28□□□□□ -0.6
DDR1-229ENST00000396342 PCLOQ9Y6V0 5065 aa11.27□□□□□ -0.6
DDR1-229ENST00000396342 C9JCJ5 164 aa11.27□□□□□ -0.61
DDR1-229ENST00000396342 CRYBA4P53673 196 aa11.27□□□□□ -0.61
DDR1-229ENST00000396342 TMEM183BQ1AE95 376 aa11.27□□□□□ -0.61
DDR1-229ENST00000396342 TMEM183AQ8IXX5 376 aa11.27□□□□□ -0.61
DDR1-229ENST00000396342 Q8N1X5 172 aa11.27□□□□□ -0.61
DDR1-229ENST00000396342 Q8TAT8 98 aa11.27□□□□□ -0.61
DDR1-229ENST00000396342 FXYD5Q96DB9 178 aa11.27□□□□□ -0.61
DDR1-229ENST00000396342 PHYHIPLQ96FC7 376 aa11.27□□□□□ -0.61
DDR1-229ENST00000396342 NDFIP1Q9BT67 221 aa11.27□□□□□ -0.61
DDR1-229ENST00000396342 KRTAP1-5Q9BYS1 174 aa11.27□□□□□ -0.61
DDR1-229ENST00000396342 OR5AC2Q9NZP5 309 aa11.27□□□□□ -0.61
DDR1-229ENST00000396342 TP53TG3Q9ULZ0 132 aa11.27□□□□□ -0.61
DDR1-229ENST00000396342 RPH3ALQ9UNE2 315 aa11.27□□□□□ -0.61
DDR1-229ENST00000396342 UPK1BO75841 260 aa11.26□□□□□ -0.61
DDR1-229ENST00000396342 ACOT6Q3I5F7 207 aaPredicted RBP11.26□□□□□ -0.61
DDR1-229ENST00000396342 CDPF1Q6NVV7 123 aa11.26□□□□□ -0.61
DDR1-229ENST00000396342 C10orf126Q8N4M7 172 aa11.26□□□□□ -0.61
DDR1-229ENST00000396342 PPP1R1CQ8WVI7 109 aa11.26□□□□□ -0.61
DDR1-229ENST00000396342 FAT2Q9NYQ8 4349 aa11.26□□□□□ -0.61
DDR1-229ENST00000396342 K7EQM0 130 aa11.25□□□□□ -0.61
DDR1-229ENST00000396342 LYPD5Q6UWN5 251 aa11.25□□□□□ -0.61
DDR1-229ENST00000396342 OR4C5Q8NGB2 326 aa11.25□□□□□ -0.61
DDR1-229ENST00000396342 TMED6Q8WW62 240 aa11.25□□□□□ -0.61
DDR1-229ENST00000396342 KCNS1Q96KK3 526 aa11.25□□□□□ -0.61
DDR1-229ENST00000396342 OTORQ9NRC9 128 aa11.25□□□□□ -0.61
DDR1-229ENST00000396342 DNAH2Q9P225 4427 aa11.25□□□□□ -0.61
DDR1-229ENST00000396342 DNAH17Q9UFH2 4485 aa11.24□□□□□ -0.61
DDR1-229ENST00000396342 TRAV21A0A0B4J279 112 aa11.24□□□□□ -0.61
DDR1-229ENST00000396342 DIRC3C9JPN6 131 aa11.24□□□□□ -0.61
DDR1-229ENST00000396342 GYPEP15421 78 aa11.24□□□□□ -0.61
DDR1-229ENST00000396342 RPL12P30050 165 aaKnown RBP11.24□□□□□ -0.61
DDR1-229ENST00000396342 FHL2Q14192 279 aa11.24□□□□□ -0.61
DDR1-229ENST00000396342 PQLC2Q6ZP29 291 aa11.24□□□□□ -0.61
DDR1-229ENST00000396342 IQCF2Q8IXL9 164 aa11.24□□□□□ -0.61
DDR1-229ENST00000396342 OR10G4Q8NGN3 311 aa11.24□□□□□ -0.61
DDR1-229ENST00000396342 SDF2L1Q9HCN8 221 aa11.24□□□□□ -0.61
DDR1-229ENST00000396342 MBD2Q9UBB5 411 aa11.24□□□□□ -0.61
DDR1-229ENST00000396342 HSPB11Q9Y547 144 aa11.24□□□□□ -0.61
DDR1-229ENST00000396342 PKHD1P08F94 4074 aa11.24□□□□□ -0.61
DDR1-229ENST00000396342 PGPA6NDG6 321 aa11.23□□□□□ -0.61
DDR1-229ENST00000396342 PSCAO43653 123 aa11.23□□□□□ -0.61
DDR1-229ENST00000396342 PPT1P50897 306 aa11.23□□□□□ -0.61
DDR1-229ENST00000396342 PRR9Q5T870 116 aa11.23□□□□□ -0.61
DDR1-229ENST00000396342 Q6AWC8 147 aa11.23□□□□□ -0.61
DDR1-229ENST00000396342 NHLRC2Q8NBF2 726 aa11.23□□□□□ -0.61
DDR1-229ENST00000396342 RASL10AQ92737 203 aa11.23□□□□□ -0.61
DDR1-229ENST00000396342 SMIM3Q9BZL3 60 aa11.23□□□□□ -0.61
DDR1-229ENST00000396342 MUC4Q99102 2169 aa11.23□□□□□ -0.61
DDR1-229ENST00000396342 DNAH11Q96DT5 4516 aa11.22□□□□□ -0.61
DDR1-229ENST00000396342 M0R2P5 195 aa11.22□□□□□ -0.61
DDR1-229ENST00000396342 ARL6IP6Q8N6S5 226 aa11.22□□□□□ -0.61
DDR1-229ENST00000396342 SH3BGRL3Q9H299 93 aa11.22□□□□□ -0.61
DDR1-229ENST00000396342 TREM1Q9NP99 234 aa11.22□□□□□ -0.61
DDR1-229ENST00000396342 MSRB1Q9NZV6 116 aa11.22□□□□□ -0.61
DDR1-229ENST00000396342 MDFICQ9P1T7 246 aa11.22□□□□□ -0.61
DDR1-229ENST00000396342 TRAV4A0A0B4J268 109 aa11.21□□□□□ -0.61
DDR1-229ENST00000396342 SERTM2A0A1B0GWG4 89 aa11.21□□□□□ -0.61
DDR1-229ENST00000396342 K7EQD1 137 aa11.21□□□□□ -0.61
DDR1-229ENST00000396342 MPC2O95563 127 aa11.21□□□□□ -0.61
DDR1-229ENST00000396342 SFTA3P0C7M3 94 aa11.21□□□□□ -0.61
DDR1-229ENST00000396342 KRTAP10-2P60368 255 aa11.21□□□□□ -0.61
DDR1-229ENST00000396342 ZFP69Q49AA0 526 aa11.21□□□□□ -0.61
DDR1-229ENST00000396342 GOLT1AQ6ZVE7 132 aa11.21□□□□□ -0.61
DDR1-229ENST00000396342 TRAV8-6A0A0B4J262 113 aa11.2□□□□□ -0.62
DDR1-229ENST00000396342 EPM2AB3EWF7 344 aa11.2□□□□□ -0.62
DDR1-229ENST00000396342 H0YIZ8 118 aa11.2□□□□□ -0.62
DDR1-229ENST00000396342 CIDEAO60543 219 aa11.2□□□□□ -0.62
DDR1-229ENST00000396342 ZNF479Q96JC4 524 aa11.2□□□□□ -0.62
DDR1-229ENST00000396342 PRADC1Q9BSG0 188 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms