RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 BLCAPP62952 87 aa11.73□□□□□ -0.53
UBE2D3-207ENST00000394801 ORMDL3Q8N138 153 aa11.73□□□□□ -0.53
UBE2D3-207ENST00000394801 GCN1Q92616 2671 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-207ENST00000394801 D6R8Y8 96 aa11.72□□□□□ -0.53
UBE2D3-207ENST00000394801 IGLV1-40P01703 118 aa11.72□□□□□ -0.53
UBE2D3-207ENST00000394801 TRBV12-3P01733 135 aa11.72□□□□□ -0.53
UBE2D3-207ENST00000394801 HIST1H1AQ02539 215 aaPredicted RBP11.72□□□□□ -0.53
UBE2D3-207ENST00000394801 MRPL51Q4U2R6 128 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-207ENST00000394801 TMEM191AQ9H0A3 160 aa11.72□□□□□ -0.53
UBE2D3-207ENST00000394801 HSPB8Q9UJY1 196 aa11.72□□□□□ -0.53
UBE2D3-207ENST00000394801 CRYBG3Q68DQ2 2970 aa11.72□□□□□ -0.53
UBE2D3-207ENST00000394801 SLC25A16P16260 332 aa11.72□□□□□ -0.53
UBE2D3-207ENST00000394801 TWIST1Q15672 202 aa11.72□□□□□ -0.53
UBE2D3-207ENST00000394801 TMEM78Q5T7P6 136 aa11.72□□□□□ -0.53
UBE2D3-207ENST00000394801 PET117Q6UWS5 81 aa11.72□□□□□ -0.53
UBE2D3-207ENST00000394801 UNQ9165/PRO28630Q6UXU0 137 aa11.72□□□□□ -0.53
UBE2D3-207ENST00000394801 OR4C5Q8NGB2 326 aa11.72□□□□□ -0.53
UBE2D3-207ENST00000394801 PRSS3P2Q8NHM4 247 aa11.72□□□□□ -0.53
UBE2D3-207ENST00000394801 PRELID3AQ96N28 172 aa11.72□□□□□ -0.53
UBE2D3-207ENST00000394801 UTP20O75691 2785 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-207ENST00000394801 C9orf139Q6ZV77 190 aa11.71□□□□□ -0.53
UBE2D3-207ENST00000394801 MAP1LC3CQ9BXW4 147 aa11.71□□□□□ -0.53
UBE2D3-207ENST00000394801 ZNF580Q9UK33 172 aa11.71□□□□□ -0.53
UBE2D3-207ENST00000394801 OR4C46A6NHA9 309 aa11.71□□□□□ -0.54
UBE2D3-207ENST00000394801 Q6ZS46 218 aa11.71□□□□□ -0.54
UBE2D3-207ENST00000394801 FA2HQ7L5A8 372 aa11.71□□□□□ -0.54
UBE2D3-207ENST00000394801 KLK15Q9H2R5 256 aa11.71□□□□□ -0.54
UBE2D3-207ENST00000394801 IGKV3D-20A0A0C4DH25 116 aa11.7□□□□□ -0.54
UBE2D3-207ENST00000394801 MUC21A0A0G2JKD1 596 aa11.7□□□□□ -0.54
UBE2D3-207ENST00000394801 MUC21A0A140T8X8 626 aa11.7□□□□□ -0.54
UBE2D3-207ENST00000394801 SMAD7O15105 426 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-207ENST00000394801 IFI27P40305 119 aaPredicted RBP11.7□□□□□ -0.54
UBE2D3-207ENST00000394801 CFHR3Q02985 330 aa11.7□□□□□ -0.54
UBE2D3-207ENST00000394801 MUC21Q5SSG8 566 aa11.7□□□□□ -0.54
UBE2D3-207ENST00000394801 C16orf92Q96LL3 132 aa11.7□□□□□ -0.54
UBE2D3-207ENST00000394801 SIGLEC8Q9NYZ4 499 aa11.7□□□□□ -0.54
UBE2D3-207ENST00000394801 LENEPQ9Y5L5 61 aa11.7□□□□□ -0.54
UBE2D3-207ENST00000394801 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.7□□□□□ -0.543e-7■■■■□ 19.8
UBE2D3-207ENST00000394801 GPHB5Q86YW7 130 aa11.7□□□□□ -0.54
UBE2D3-207ENST00000394801 OR10AG1Q8NH19 301 aa11.7□□□□□ -0.54
UBE2D3-207ENST00000394801 A0A0G2JLM5 398 aa11.69□□□□□ -0.54
UBE2D3-207ENST00000394801 COTL1Q14019 142 aa11.69□□□□□ -0.54
UBE2D3-207ENST00000394801 NRGNQ92686 78 aa11.69□□□□□ -0.54
UBE2D3-207ENST00000394801 ZNF747Q9BV97 191 aa11.69□□□□□ -0.54
UBE2D3-207ENST00000394801 C11orf21Q9P2W6 132 aa11.69□□□□□ -0.54
UBE2D3-207ENST00000394801 A0A096LNT2 108 aa11.69□□□□□ -0.54
UBE2D3-207ENST00000394801 SOCS3O14543 225 aa11.69□□□□□ -0.54
UBE2D3-207ENST00000394801 PF4V1P10720 104 aa11.69□□□□□ -0.54
UBE2D3-207ENST00000394801 VAMP3Q15836 100 aa11.69□□□□□ -0.54
UBE2D3-207ENST00000394801 A0A096LNJ9 63 aa11.68□□□□□ -0.54
UBE2D3-207ENST00000394801 CKS2P33552 79 aa11.68□□□□□ -0.54
UBE2D3-207ENST00000394801 LINC01356Q8N9X3 169 aa11.68□□□□□ -0.54
UBE2D3-207ENST00000394801 OR4X2Q8NGF9 303 aa11.68□□□□□ -0.54
UBE2D3-207ENST00000394801 RNF185Q96GF1 192 aa11.68□□□□□ -0.54
UBE2D3-207ENST00000394801 NPFFR1Q9GZQ6 430 aa11.68□□□□□ -0.54
UBE2D3-207ENST00000394801 MSRB1Q9NZV6 116 aa11.68□□□□□ -0.54
UBE2D3-207ENST00000394801 PPBPP02775 128 aa11.68□□□□□ -0.54
UBE2D3-207ENST00000394801 MPV17L2Q567V2 206 aa11.68□□□□□ -0.54
UBE2D3-207ENST00000394801 C20orf173Q96LM9 149 aa11.68□□□□□ -0.54
UBE2D3-207ENST00000394801 IGHV3-11P01762 117 aa11.67□□□□□ -0.54
UBE2D3-207ENST00000394801 FAM106AQ4KMX7 169 aa11.67□□□□□ -0.54
UBE2D3-207ENST00000394801 LINC01545Q5VT33 79 aa11.67□□□□□ -0.54
UBE2D3-207ENST00000394801 SLC25A34Q6PIV7 304 aa11.67□□□□□ -0.54
UBE2D3-207ENST00000394801 TAX1BP3O14907 124 aa11.67□□□□□ -0.54
UBE2D3-207ENST00000394801 LINC00477Q96M19 166 aa11.67□□□□□ -0.54
UBE2D3-207ENST00000394801 LOC389332A0A1B0GUA5 103 aa11.66□□□□□ -0.54
UBE2D3-207ENST00000394801 LOXL1Q08397 574 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-207ENST00000394801 BVES-AS1Q5T3Y7 98 aa11.66□□□□□ -0.54
UBE2D3-207ENST00000394801 C12orf54Q6X4T0 127 aa11.66□□□□□ -0.54
UBE2D3-207ENST00000394801 DEFB125Q8N687 156 aa11.66□□□□□ -0.54
UBE2D3-207ENST00000394801 J3QLI3 93 aa11.65□□□□□ -0.54
UBE2D3-207ENST00000394801 NUDT3O95989 172 aa11.65□□□□□ -0.54
UBE2D3-207ENST00000394801 NPYP01303 97 aa11.65□□□□□ -0.54
UBE2D3-207ENST00000394801 IGHV7-4-1A0A0J9YVY3 117 aa11.65□□□□□ -0.54
UBE2D3-207ENST00000394801 HSBP1L1C9JCN9 74 aa11.65□□□□□ -0.54
UBE2D3-207ENST00000394801 OVOL1O14753 267 aa11.65□□□□□ -0.54
UBE2D3-207ENST00000394801 UBR5O95071 2799 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-207ENST00000394801 IGHV4-4A0A075B6R2 117 aa11.64□□□□□ -0.55
UBE2D3-207ENST00000394801 LINC01546A6NGU7 62 aa11.64□□□□□ -0.55
UBE2D3-207ENST00000394801 MS4A6AQ9H2W1 248 aa11.64□□□□□ -0.55
UBE2D3-207ENST00000394801 CSPG4Q6UVK1 2322 aa11.64□□□□□ -0.55
UBE2D3-207ENST00000394801 ZNF462Q96JM2 2506 aa11.64□□□□□ -0.55
UBE2D3-207ENST00000394801 hDV102S1A0JD36 115 aa11.64□□□□□ -0.55
UBE2D3-207ENST00000394801 SMKR1H3BMG3 65 aa11.64□□□□□ -0.55
UBE2D3-207ENST00000394801 PRB1P04280 392 aa11.64□□□□□ -0.55
UBE2D3-207ENST00000394801 FOXE3Q13461 319 aa11.64□□□□□ -0.55
UBE2D3-207ENST00000394801 DEFB112Q30KQ8 113 aa11.64□□□□□ -0.55
UBE2D3-207ENST00000394801 PRSS57Q6UWY2 283 aa11.64□□□□□ -0.55
UBE2D3-207ENST00000394801 LCNL1Q6ZST4 164 aa11.64□□□□□ -0.55
UBE2D3-207ENST00000394801 BBC3Q96PG8 261 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-207ENST00000394801 SCRT2Q9NQ03 307 aa11.64□□□□□ -0.55
UBE2D3-207ENST00000394801 FBN2P35556 2912 aa11.64□□□□□ -0.55
UBE2D3-207ENST00000394801 K7EMT4 169 aa11.63□□□□□ -0.55
UBE2D3-207ENST00000394801 SNAI2O43623 268 aa11.63□□□□□ -0.55
UBE2D3-207ENST00000394801 PSMB8P28062 276 aa11.63□□□□□ -0.55
UBE2D3-207ENST00000394801 DAZ1Q9NQZ3 744 aaKnown RBP11.63□□□□□ -0.55
UBE2D3-207ENST00000394801 CSMD2Q7Z408 3487 aa11.63□□□□□ -0.55
UBE2D3-207ENST00000394801 IGHV4-59P01825 116 aa11.63□□□□□ -0.55
UBE2D3-207ENST00000394801 COX6B1P14854 86 aa11.63□□□□□ -0.55
UBE2D3-207ENST00000394801 SRSF1Q07955 248 aaKnown RBP eCLIP11.63□□□□□ -0.552e-8■□□□□ 10.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms