RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 Q8N976 141 aa11.45□□□□□ -0.58
GPC3-202ENST00000394299 ZNF738Q8NE65 137 aa11.45□□□□□ -0.58
GPC3-202ENST00000394299 RBAKDNA6NC62 111 aa11.44□□□□□ -0.58
GPC3-202ENST00000394299 FOXE3Q13461 319 aa11.44□□□□□ -0.58
GPC3-202ENST00000394299 TMEM78Q5T7P6 136 aa11.44□□□□□ -0.58
GPC3-202ENST00000394299 IGKV3D-20A0A0C4DH25 116 aa11.43□□□□□ -0.58
GPC3-202ENST00000394299 IGHV7-4-1A0A0J9YVY3 117 aa11.43□□□□□ -0.58
GPC3-202ENST00000394299 C3orf79P0CE67 100 aa11.43□□□□□ -0.58
GPC3-202ENST00000394299 PRR9Q5T870 116 aa11.43□□□□□ -0.58
GPC3-202ENST00000394299 AMN1Q8IY45 258 aa11.43□□□□□ -0.58
GPC3-202ENST00000394299 ZNF702PQ9H963 129 aa11.43□□□□□ -0.58
GPC3-202ENST00000394299 ITPR2Q14571 2701 aa11.43□□□□□ -0.58
GPC3-202ENST00000394299 FAM181BA6NEQ2 426 aa11.43□□□□□ -0.58
GPC3-202ENST00000394299 FBLL1A6NHQ2 334 aaKnown RBP11.43□□□□□ -0.58
GPC3-202ENST00000394299 M0R2Z0 102 aa11.43□□□□□ -0.58
GPC3-202ENST00000394299 SOCS3O14543 225 aa11.43□□□□□ -0.58
GPC3-202ENST00000394299 LBHQ53QV2 105 aaPredicted RBP11.43□□□□□ -0.58
GPC3-202ENST00000394299 WFDC3Q8IUB2 231 aa11.43□□□□□ -0.58
GPC3-202ENST00000394299 FER1L6-AS1Q8NA97 138 aa11.43□□□□□ -0.58
GPC3-202ENST00000394299 MYO9AB2RTY4 2548 aa11.43□□□□□ -0.58
GPC3-202ENST00000394299 CLEC5AQ9NY25 188 aa11.42□□□□□ -0.58
GPC3-202ENST00000394299 FLNAP21333 2647 aaKnown RBP11.42□□□□□ -0.58
GPC3-202ENST00000394299 NF1P21359 2839 aa11.42□□□□□ -0.58
GPC3-202ENST00000394299 AKAP9Q99996 3911 aa11.42□□□□□ -0.58
GPC3-202ENST00000394299 PDZD2O15018 2839 aa11.42□□□□□ -0.58
GPC3-202ENST00000394299 IGLC6P0CF74 106 aa11.42□□□□□ -0.58
GPC3-202ENST00000394299 KIR3DS1Q14943 382 aa11.42□□□□□ -0.58
GPC3-202ENST00000394299 TWIST1Q15672 202 aa11.42□□□□□ -0.58
GPC3-202ENST00000394299 EBLN2Q6P2I7 272 aa11.42□□□□□ -0.58
GPC3-202ENST00000394299 C9orf47Q6ZRZ4 202 aa11.42□□□□□ -0.58
GPC3-202ENST00000394299 BORCS7Q96B45 105 aa11.42□□□□□ -0.58
GPC3-202ENST00000394299 DAZ1Q9NQZ3 744 aaKnown RBP11.42□□□□□ -0.58
GPC3-202ENST00000394299 SMPXQ9UHP9 88 aa11.42□□□□□ -0.58
GPC3-202ENST00000394299 ACANP16112 2415 aa11.42□□□□□ -0.58
GPC3-202ENST00000394299 KMT2BQ9UMN6 2715 aaPredicted RBP11.42□□□□□ -0.58
GPC3-202ENST00000394299 NUTF2P61970 127 aaKnown RBP11.41□□□□□ -0.58
GPC3-202ENST00000394299 Q6AWC8 147 aa11.41□□□□□ -0.58
GPC3-202ENST00000394299 LINC00173Q6ZV60 143 aa11.41□□□□□ -0.58
GPC3-202ENST00000394299 C9orf139Q6ZV77 190 aa11.41□□□□□ -0.58
GPC3-202ENST00000394299 SMKR1H3BMG3 65 aa11.41□□□□□ -0.58
GPC3-202ENST00000394299 SPRY2O43597 315 aa11.41□□□□□ -0.58
GPC3-202ENST00000394299 C18orf65Q6ZTR6 163 aa11.41□□□□□ -0.58
GPC3-202ENST00000394299 MRPL53Q96EL3 112 aaKnown RBP11.41□□□□□ -0.58
GPC3-202ENST00000394299 LINC00614P0C842 121 aa11.4□□□□□ -0.58
GPC3-202ENST00000394299 WFDC12Q8WWY7 111 aa11.4□□□□□ -0.58
GPC3-202ENST00000394299 ZNF580Q9UK33 172 aa11.4□□□□□ -0.58
GPC3-202ENST00000394299 PAM16Q9Y3D7 125 aa11.4□□□□□ -0.58
GPC3-202ENST00000394299 TIMM8BQ9Y5J9 83 aaPredicted RBP11.4□□□□□ -0.58
GPC3-202ENST00000394299 D6R8Y8 96 aa11.4□□□□□ -0.58
GPC3-202ENST00000394299 PLA2G2AP14555 144 aa11.4□□□□□ -0.58
GPC3-202ENST00000394299 TFPI2P48307 235 aa11.4□□□□□ -0.58
GPC3-202ENST00000394299 FAM106AQ4KMX7 169 aa11.4□□□□□ -0.58
GPC3-202ENST00000394299 ZNF493Q6ZR52 646 aa11.4□□□□□ -0.58
GPC3-202ENST00000394299 ATOH7Q8N100 152 aa11.4□□□□□ -0.58
GPC3-202ENST00000394299 LOC389332A0A1B0GUA5 103 aa11.39□□□□□ -0.59
GPC3-202ENST00000394299 GAS8-AS1O95177 125 aa11.39□□□□□ -0.59
GPC3-202ENST00000394299 LINC01559Q495D7 138 aa11.39□□□□□ -0.59
GPC3-202ENST00000394299 SPATA12Q7Z6I5 190 aa11.39□□□□□ -0.59
GPC3-202ENST00000394299 GATD1Q8NB37 220 aa11.39□□□□□ -0.59
GPC3-202ENST00000394299 SORL1Q92673 2214 aa11.39□□□□□ -0.59
GPC3-202ENST00000394299 IGHV1-24A0A0C4DH33 117 aa11.39□□□□□ -0.59
GPC3-202ENST00000394299 EREGO14944 169 aa11.39□□□□□ -0.59
GPC3-202ENST00000394299 CTRLP40313 264 aa11.39□□□□□ -0.59
GPC3-202ENST00000394299 SYNJ2BPP57105 145 aa11.39□□□□□ -0.59
GPC3-202ENST00000394299 HIST1H1AQ02539 215 aaPredicted RBP11.39□□□□□ -0.59
GPC3-202ENST00000394299 FAM104BQ5XKR9 115 aa11.39□□□□□ -0.59
GPC3-202ENST00000394299 TEX43Q6ZNM6 134 aa11.39□□□□□ -0.59
GPC3-202ENST00000394299 NDUFAF3Q9BU61 184 aa11.39□□□□□ -0.59
GPC3-202ENST00000394299 IGHV4OR15-8A0A075B7B6 117 aa11.38□□□□□ -0.59
GPC3-202ENST00000394299 A0A087WW49 117 aa11.38□□□□□ -0.59
GPC3-202ENST00000394299 RPS20P60866 119 aaKnown RBP11.38□□□□□ -0.59
GPC3-202ENST00000394299 MRPL51Q4U2R6 128 aaKnown RBP11.38□□□□□ -0.59
GPC3-202ENST00000394299 NCR2O95944 276 aa11.38□□□□□ -0.59
GPC3-202ENST00000394299 G0S2P27469 103 aa11.38□□□□□ -0.59
GPC3-202ENST00000394299 DEFB136Q30KP8 78 aa11.38□□□□□ -0.59
GPC3-202ENST00000394299 A0A1B0GW15 77 aa11.37□□□□□ -0.59
GPC3-202ENST00000394299 C2orf70A6NJV1 201 aa11.37□□□□□ -0.59
GPC3-202ENST00000394299 MAJINQ3KP22 176 aa11.37□□□□□ -0.59
GPC3-202ENST00000394299 PRSS57Q6UWY2 283 aa11.37□□□□□ -0.59
GPC3-202ENST00000394299 IFI27P40305 119 aaPredicted RBP11.36□□□□□ -0.59
GPC3-202ENST00000394299 FXYD7P58549 80 aa11.36□□□□□ -0.59
GPC3-202ENST00000394299 ZFAND2AQ8N6M9 145 aa11.36□□□□□ -0.59
GPC3-202ENST00000394299 OR10J6PQ8NGY7 276 aa11.36□□□□□ -0.59
GPC3-202ENST00000394299 OR10AG1Q8NH19 301 aa11.36□□□□□ -0.59
GPC3-202ENST00000394299 MCRIP2Q9BUT9 160 aaKnown RBP11.36□□□□□ -0.59
GPC3-202ENST00000394299 J3QKU1 62 aa11.36□□□□□ -0.59
GPC3-202ENST00000394299 K7EMT4 169 aa11.36□□□□□ -0.59
GPC3-202ENST00000394299 SRSF2Q01130 221 aaKnown RBP11.36□□□□□ -0.59
GPC3-202ENST00000394299 DUX3Q96PT4 197 aa11.36□□□□□ -0.59
GPC3-202ENST00000394299 OR8A1Q8NGG7 326 aa11.35□□□□□ -0.59
GPC3-202ENST00000394299 PPP1R14DQ9NXH3 145 aa11.35□□□□□ -0.59
GPC3-202ENST00000394299 DCANP1Q8TF63 244 aa11.35□□□□□ -0.59
GPC3-202ENST00000394299 CHCHD1Q96BP2 118 aaKnown RBP11.35□□□□□ -0.59
GPC3-202ENST00000394299 RNF185Q96GF1 192 aa11.35□□□□□ -0.59
GPC3-202ENST00000394299 LINC00477Q96M19 166 aa11.35□□□□□ -0.59
GPC3-202ENST00000394299 PRELID3AQ96N28 172 aa11.35□□□□□ -0.59
GPC3-202ENST00000394299 KIR2DL5BA0A0G2JN68 375 aa11.34□□□□□ -0.59
GPC3-202ENST00000394299 KIR2DL5BA0A0G2JPC4 375 aa11.34□□□□□ -0.59
GPC3-202ENST00000394299 OVOL1O14753 267 aa11.34□□□□□ -0.59
GPC3-202ENST00000394299 GATA1P15976 413 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms