RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 IGKV2-40A0A087WW87 121 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-202ENST00000394082 IGKV2D-40P01614 121 aaPredicted RBP11.93□□□□□ -0.5
SNRPA1-202ENST00000394082 FHL2Q14192 279 aa11.93□□□□□ -0.5
SNRPA1-202ENST00000394082 GCSAMLQ5JQS6 135 aa11.93□□□□□ -0.5
SNRPA1-202ENST00000394082 PRR9Q5T870 116 aa11.93□□□□□ -0.5
SNRPA1-202ENST00000394082 LYPD5Q6UWN5 251 aa11.93□□□□□ -0.5
SNRPA1-202ENST00000394082 NEGR1Q7Z3B1 354 aa11.93□□□□□ -0.5
SNRPA1-202ENST00000394082 LYPD1Q8N2G4 141 aa11.93□□□□□ -0.5
SNRPA1-202ENST00000394082 ARPC5LQ9BPX5 153 aa11.93□□□□□ -0.5
SNRPA1-202ENST00000394082 OR51M1Q9H341 326 aa11.93□□□□□ -0.5
SNRPA1-202ENST00000394082 TP53TG3Q9ULZ0 132 aa11.93□□□□□ -0.5
SNRPA1-202ENST00000394082 ZNF415Q09FC8 603 aa11.92□□□□□ -0.5
SNRPA1-202ENST00000394082 FAM122CQ6P4D5 195 aa11.92□□□□□ -0.5
SNRPA1-202ENST00000394082 SLC25A31Q9H0C2 315 aa11.92□□□□□ -0.5
SNRPA1-202ENST00000394082 LENEPQ9Y5L5 61 aa11.92□□□□□ -0.5
SNRPA1-202ENST00000394082 SSNA1O43805 119 aa11.91□□□□□ -0.5
SNRPA1-202ENST00000394082 NHLH2Q02577 135 aa11.91□□□□□ -0.5
SNRPA1-202ENST00000394082 ZNF266Q14584 549 aa11.91□□□□□ -0.5
SNRPA1-202ENST00000394082 MIR17HGQ75NE6 70 aa11.91□□□□□ -0.5
SNRPA1-202ENST00000394082 OR5C1Q8NGR4 320 aa11.91□□□□□ -0.5
SNRPA1-202ENST00000394082 RASL10AQ92737 203 aa11.91□□□□□ -0.5
SNRPA1-202ENST00000394082 FXYD5Q96DB9 178 aa11.91□□□□□ -0.5
SNRPA1-202ENST00000394082 MRPL16Q9NX20 251 aaKnown RBP11.91□□□□□ -0.5
SNRPA1-202ENST00000394082 EPM2AB3EWF7 344 aa11.9□□□□□ -0.5
SNRPA1-202ENST00000394082 E5RGE8 158 aa11.9□□□□□ -0.5
SNRPA1-202ENST00000394082 CSN1S1P47710 185 aa11.9□□□□□ -0.5
SNRPA1-202ENST00000394082 OR10G4Q8NGN3 311 aa11.9□□□□□ -0.5
SNRPA1-202ENST00000394082 SPXQ9BT56 116 aa11.9□□□□□ -0.5
SNRPA1-202ENST00000394082 PAXXQ9BUH6 204 aa11.9□□□□□ -0.5
SNRPA1-202ENST00000394082 LY96Q9Y6Y9 160 aa11.9□□□□□ -0.5
SNRPA1-202ENST00000394082 PTTG1O95997 202 aa11.89□□□□□ -0.51
SNRPA1-202ENST00000394082 IGHV3-53P01767 116 aa11.89□□□□□ -0.51
SNRPA1-202ENST00000394082 ORM1P02763 201 aa11.89□□□□□ -0.51
SNRPA1-202ENST00000394082 Q6AWC8 147 aa11.89□□□□□ -0.51
SNRPA1-202ENST00000394082 Q6ZQT7 251 aa11.89□□□□□ -0.51
SNRPA1-202ENST00000394082 THAP6Q8TBB0 222 aa11.89□□□□□ -0.51
SNRPA1-202ENST00000394082 C8orf49Q96NF6 230 aa11.89□□□□□ -0.51
SNRPA1-202ENST00000394082 NMES1Q9C002 83 aa11.89□□□□□ -0.51
SNRPA1-202ENST00000394082 WDR61Q9GZS3 305 aaKnown RBP11.89□□□□□ -0.51
SNRPA1-202ENST00000394082 HERC1Q15751 4861 aa11.89□□□□□ -0.51
SNRPA1-202ENST00000394082 A0A087WTM6 91 aa11.88□□□□□ -0.51
SNRPA1-202ENST00000394082 K7EQD1 137 aa11.88□□□□□ -0.51
SNRPA1-202ENST00000394082 SIX6O95475 246 aa11.88□□□□□ -0.51
SNRPA1-202ENST00000394082 CYCSP99999 105 aaKnown RBP11.88□□□□□ -0.51
SNRPA1-202ENST00000394082 TMED6Q8WW62 240 aa11.88□□□□□ -0.51
SNRPA1-202ENST00000394082 PHYHIPLQ96FC7 376 aa11.88□□□□□ -0.51
SNRPA1-202ENST00000394082 TRGV4A0A0C4DH28 118 aa11.87□□□□□ -0.51
SNRPA1-202ENST00000394082 C17orf112F2Z3M2 114 aa11.87□□□□□ -0.51
SNRPA1-202ENST00000394082 OR10J4P0C629 311 aa11.87□□□□□ -0.51
SNRPA1-202ENST00000394082 DNAH10OSP0CZ25 163 aa11.87□□□□□ -0.51
SNRPA1-202ENST00000394082 SRIP30626 198 aa11.87□□□□□ -0.51
SNRPA1-202ENST00000394082 XGP55808 180 aa11.87□□□□□ -0.51
SNRPA1-202ENST00000394082 TDRG1Q3Y452 100 aa11.87□□□□□ -0.51
SNRPA1-202ENST00000394082 Q8TAT8 98 aa11.87□□□□□ -0.51
SNRPA1-202ENST00000394082 MDFICQ9P1T7 246 aa11.87□□□□□ -0.51
SNRPA1-202ENST00000394082 FAT1Q14517 4588 aa11.87□□□□□ -0.51
SNRPA1-202ENST00000394082 TRGV11A0A075B6L2 103 aa11.86□□□□□ -0.51
SNRPA1-202ENST00000394082 EVI2AP22794 236 aa11.86□□□□□ -0.51
SNRPA1-202ENST00000394082 LRRC37A5PQ49AS3 106 aa11.86□□□□□ -0.51
SNRPA1-202ENST00000394082 PCNPQ8WW12 178 aaKnown RBP11.86□□□□□ -0.51
SNRPA1-202ENST00000394082 MSRB1Q9NZV6 116 aa11.86□□□□□ -0.51
SNRPA1-202ENST00000394082 TNFRSF18Q9Y5U5 241 aa11.86□□□□□ -0.51
SNRPA1-202ENST00000394082 OR7C2O60412 319 aa11.85□□□□□ -0.51
SNRPA1-202ENST00000394082 IFNA5P01569 189 aa11.85□□□□□ -0.51
SNRPA1-202ENST00000394082 RANP62826 216 aaKnown RBP11.85□□□□□ -0.51
SNRPA1-202ENST00000394082 FAM159AQ6UWV7 190 aa11.85□□□□□ -0.51
SNRPA1-202ENST00000394082 SH2D6Q7Z4S9 175 aa11.85□□□□□ -0.51
SNRPA1-202ENST00000394082 C10orf126Q8N4M7 172 aa11.85□□□□□ -0.51
SNRPA1-202ENST00000394082 ARL6IP6Q8N6S5 226 aa11.85□□□□□ -0.51
SNRPA1-202ENST00000394082 ZNF479Q96JC4 524 aa11.85□□□□□ -0.51
SNRPA1-202ENST00000394082 TXNDC17Q9BRA2 123 aa11.85□□□□□ -0.51
SNRPA1-202ENST00000394082 OR5AC2Q9NZP5 309 aa11.85□□□□□ -0.51
SNRPA1-202ENST00000394082 C9JCJ5 164 aa11.84□□□□□ -0.51
SNRPA1-202ENST00000394082 DIRC3C9JPN6 131 aa11.84□□□□□ -0.51
SNRPA1-202ENST00000394082 TIRAPP58753 221 aa11.84□□□□□ -0.51
SNRPA1-202ENST00000394082 TAS2R45P59539 299 aa11.84□□□□□ -0.51
SNRPA1-202ENST00000394082 MUC21Q5SSG8 566 aa11.84□□□□□ -0.51
SNRPA1-202ENST00000394082 BOLA1Q9Y3E2 137 aa11.84□□□□□ -0.51
SNRPA1-202ENST00000394082 TRAV4A0A0B4J268 109 aa11.83□□□□□ -0.52
SNRPA1-202ENST00000394082 H0YIZ8 118 aa11.83□□□□□ -0.52
SNRPA1-202ENST00000394082 SFTA3P0C7M3 94 aa11.83□□□□□ -0.52
SNRPA1-202ENST00000394082 PET100P0DJ07 73 aa11.83□□□□□ -0.52
SNRPA1-202ENST00000394082 GYPEP15421 78 aa11.83□□□□□ -0.52
SNRPA1-202ENST00000394082 H2BFSP57053 126 aa11.83□□□□□ -0.52
SNRPA1-202ENST00000394082 UBE2L3P68036 154 aaKnown RBP11.83□□□□□ -0.52
SNRPA1-202ENST00000394082 KHDC3LQ587J8 217 aa11.83□□□□□ -0.52
SNRPA1-202ENST00000394082 WFDC10BQ8IUB3 73 aa11.83□□□□□ -0.52
SNRPA1-202ENST00000394082 ALG5Q9Y673 324 aa11.83□□□□□ -0.52
SNRPA1-202ENST00000394082 TMEM183BQ1AE95 376 aa11.82□□□□□ -0.52
SNRPA1-202ENST00000394082 TMEM183AQ8IXX5 376 aa11.82□□□□□ -0.52
SNRPA1-202ENST00000394082 PPP1R1CQ8WVI7 109 aa11.82□□□□□ -0.52
SNRPA1-202ENST00000394082 ATP5SQ99766 215 aa11.82□□□□□ -0.52
SNRPA1-202ENST00000394082 M0R2P5 195 aa11.81□□□□□ -0.52
SNRPA1-202ENST00000394082 INAFM2P0DMQ5 153 aa11.81□□□□□ -0.52
SNRPA1-202ENST00000394082 KRTAP10-1P60331 282 aa11.81□□□□□ -0.52
SNRPA1-202ENST00000394082 FRZBQ92765 325 aa11.81□□□□□ -0.52
SNRPA1-202ENST00000394082 OTORQ9NRC9 128 aa11.81□□□□□ -0.52
SNRPA1-202ENST00000394082 VPS13BQ7Z7G8 4022 aa11.81□□□□□ -0.52
SNRPA1-202ENST00000394082 RGS21Q2M5E4 152 aa11.8□□□□□ -0.52
SNRPA1-202ENST00000394082 FFAR4Q5NUL3 377 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms