RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 UBE2G2P60604 165 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 MUC21Q5SSG8 566 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 LGALS9CQ6DKI2 356 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 TMEM88Q6PEY1 159 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 LYPD1Q8N2G4 141 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 CMTM2Q8TAZ6 248 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 ST6GAL2Q96JF0 529 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 GSN-AS1Q9NRJ2 163 aa5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 TIMM8BQ9Y5J9 83 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P1-201ENST00000393368 CTXND1A0A1B0GTU2 59 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 TEX48A0A1B0GUV7 120 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 A0A1B0GV50 99 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 RBAKDNA6NC62 111 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 CBY3A6NI87 242 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 HMSDA8MTL9 139 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 F5H768 121 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 TAAR5O14804 337 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 BCL2L11O43521 198 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 CXorf1O96002 111 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 ZNF345Q14585 488 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 AKR1C8PQ5T2L2 129 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 Q6ZNX1 250 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 ZNF493Q6ZR52 646 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 Q6ZTI0 123 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 CCDC28AQ8IWP9 274 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 C11orf72Q8NBR9 251 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 SUN5Q8TC36 379 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 RXFP4Q8TDU9 374 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 TVP23CQ96ET8 276 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 PYGO2Q9BRQ0 406 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 NDUFAF3Q9BU61 184 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 ZNF471Q9BX82 626 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 NAGKQ9UJ70 344 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 KLF12Q9Y4X4 402 aa5.41□□□□□ -1.54
HMGB3P1-201ENST00000393368 IGHV1OR15-1A0A075B7D0 117 aa5.4□□□□□ -1.54
HMGB3P1-201ENST00000393368 KANTRA0A1W2PQU2 76 aa5.4□□□□□ -1.54
HMGB3P1-201ENST00000393368 MAP1LC3B2A6NCE7 125 aa5.4□□□□□ -1.54
HMGB3P1-201ENST00000393368 SNURFLB1AK76 121 aa5.4□□□□□ -1.54
HMGB3P1-201ENST00000393368 RGS13O14921 159 aa5.4□□□□□ -1.54
HMGB3P1-201ENST00000393368 TCRAP04437 139 aa5.4□□□□□ -1.54
HMGB3P1-201ENST00000393368 SUMO1P63165 101 aaKnown RBP5.4□□□□□ -1.54
HMGB3P1-201ENST00000393368 FAM74A1Q5RGS3 127 aa5.4□□□□□ -1.54
HMGB3P1-201ENST00000393368 TMUB2Q71RG4 321 aa5.4□□□□□ -1.54
HMGB3P1-201ENST00000393368 EIF4E3Q8N5X7 224 aaKnown RBP5.4□□□□□ -1.54
HMGB3P1-201ENST00000393368 LINC00479Q96M42 142 aa5.4□□□□□ -1.54
HMGB3P1-201ENST00000393368 C8orf49Q96NF6 230 aa5.4□□□□□ -1.54
HMGB3P1-201ENST00000393368 MAP1LC3BQ9GZQ8 125 aa5.4□□□□□ -1.54
HMGB3P1-201ENST00000393368 TMEM167BQ9NRX6 74 aa5.4□□□□□ -1.54
HMGB3P1-201ENST00000393368 BIRC6Q9NR09 4857 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 FAT2Q9NYQ8 4349 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 TRGV1A0A0A0MS02 117 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 TRAV34A0A0B4J273 112 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 A0A0D9SG52 128 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 PFDN1O60925 122 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 ATP5G1P05496 136 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 NMBP08949 121 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 HOXA5P20719 270 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 ATP5G3P48201 142 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 ZNF80P51504 273 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 TCTAP57738 103 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 PRNTQ86SH4 94 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 LINC00612Q8N6U2 182 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 C5orf17Q8NAS9 161 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 FAM213BQ8TBF2 198 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 TMED6Q8WW62 240 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 LINC00467Q9BRT7 94 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 TREM1Q9NP99 234 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 MRPL16Q9NX20 251 aaKnown RBP5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 MDFICQ9P1T7 246 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 EPDR1Q9UM22 224 aa5.39□□□□□ -1.55
HMGB3P1-201ENST00000393368 HECTD4Q9Y4D8 3996 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 TRBV7-9A0A0J9YWB2 115 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 A0A0J9YY99 117 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 A0A1B0GVG6 124 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 A0A1W2PRE2 83 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 FAM74A7A6NL05 159 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 NUDT3O95989 172 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 IFNA7P01567 189 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 IGLV2-11P01706 119 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 IGHV3-53P01767 116 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 TCL1AP56279 114 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 OR5I1Q13606 314 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 TMEM183BQ1AE95 376 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 ANXA2RQ3ZCQ2 193 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 LGALSLQ3ZCW2 172 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 Q6AWC8 147 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 TMEM183AQ8IXX5 376 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 TCTE3Q8IZS6 198 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 CYB561D1Q8N8Q1 229 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 TMEM75Q8N9X5 138 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 ZNF680Q8NEM1 530 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 PSG8Q9UQ74 426 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 DNAH17Q9UFH2 4485 aa5.38□□□□□ -1.55
HMGB3P1-201ENST00000393368 IGLV2-18A0A075B6J9 118 aa5.37□□□□□ -1.55
HMGB3P1-201ENST00000393368 TRGV2A0A075B6R0 118 aa5.37□□□□□ -1.55
HMGB3P1-201ENST00000393368 TRAV26-1A0A087WT03 109 aa5.37□□□□□ -1.55
HMGB3P1-201ENST00000393368 GNRH2O43555 120 aa5.37□□□□□ -1.55
HMGB3P1-201ENST00000393368 SPINK4O60575 86 aa5.37□□□□□ -1.55
HMGB3P1-201ENST00000393368 GCGP01275 180 aa5.37□□□□□ -1.55
HMGB3P1-201ENST00000393368 SEC11BP0C7V7 166 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms