RNA–Protein interactions for RNA: ENST00000389757.7

PKP4-201, Transcript of plakophilin 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKP4, Length 5,777 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-201ENST00000389757 FXYD5Q96DB9 178 aa8.07□□□□□ -1.12
PKP4-201ENST00000389757 TMEM213A2RRL7 107 aa8.07□□□□□ -1.12
PKP4-201ENST00000389757 ZNF114Q8NC26 417 aa8.07□□□□□ -1.12
PKP4-201ENST00000389757 CLPSL1A2RUU4 121 aa8.07□□□□□ -1.12
PKP4-201ENST00000389757 LY6G5BQ8NDX9 201 aa8.07□□□□□ -1.12
PKP4-201ENST00000389757 EP400Q96L91 3159 aa8.06□□□□□ -1.12
PKP4-201ENST00000389757 IGLV11-55A0A075B6I3 123 aa8.06□□□□□ -1.12
PKP4-201ENST00000389757 RITA1Q96K30 269 aa8.06□□□□□ -1.12
PKP4-201ENST00000389757 JPT2Q9H910 190 aa8.06□□□□□ -1.12
PKP4-201ENST00000389757 COLCA2A8K830 154 aa8.06□□□□□ -1.12
PKP4-201ENST00000389757 TMEM238C9JI98 176 aa8.06□□□□□ -1.12
PKP4-201ENST00000389757 ZNF726P1Q15940 193 aa8.06□□□□□ -1.12
PKP4-201ENST00000389757 ZNRF2Q8NHG8 242 aa8.05□□□□□ -1.12
PKP4-201ENST00000389757 TMEM131Q92545 1883 aa8.05□□□□□ -1.12
PKP4-201ENST00000389757 SLAQ13239 276 aa8.05□□□□□ -1.12
PKP4-201ENST00000389757 CYYR1Q96J86 154 aa8.05□□□□□ -1.12
PKP4-201ENST00000389757 CSPG4Q6UVK1 2322 aa8.05□□□□□ -1.12
PKP4-201ENST00000389757 PAX4O43316 350 aa8.05□□□□□ -1.12
PKP4-201ENST00000389757 I3L2K1 104 aa8.05□□□□□ -1.12
PKP4-201ENST00000389757 I3L3M4 83 aa8.05□□□□□ -1.12
PKP4-201ENST00000389757 K7EIM0 57 aa8.05□□□□□ -1.12
PKP4-201ENST00000389757 TMEM256Q8N2U0 113 aa8.05□□□□□ -1.12
PKP4-201ENST00000389757 MRPL53Q96EL3 112 aaKnown RBP8.05□□□□□ -1.12
PKP4-201ENST00000389757 F6UB75 175 aa8.05□□□□□ -1.12
PKP4-201ENST00000389757 LMO4P61968 165 aa8.05□□□□□ -1.12
PKP4-201ENST00000389757 CST9LQ9H4G1 147 aa8.05□□□□□ -1.12
PKP4-201ENST00000389757 MYCNOSP40205 109 aa8.04□□□□□ -1.12
PKP4-201ENST00000389757 FAM104BQ5XKR9 115 aa8.04□□□□□ -1.12
PKP4-201ENST00000389757 LYPD6Q86Y78 171 aa8.04□□□□□ -1.12
PKP4-201ENST00000389757 BCL6BQ8N143 479 aaPredicted RBP8.04□□□□□ -1.12
PKP4-201ENST00000389757 NHP2Q9NX24 153 aaKnown RBP8.04□□□□□ -1.12
PKP4-201ENST00000389757 TMEM89A2RUT3 159 aa8.04□□□□□ -1.12
PKP4-201ENST00000389757 IGHG2P01859 326 aa8.04□□□□□ -1.12
PKP4-201ENST00000389757 HIST1H2BLQ99880 126 aa8.04□□□□□ -1.12
PKP4-201ENST00000389757 PYGO2Q9BRQ0 406 aa8.04□□□□□ -1.12
PKP4-201ENST00000389757 TMEM243Q9BU79 118 aa8.04□□□□□ -1.12
PKP4-201ENST00000389757 IGHV4OR15-8A0A075B7B6 117 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 A0A087WW49 117 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 FAM231DQ6ZW35 169 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 PGPEP1Q9NXJ5 209 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 IGF2BP2-AS1Q96M15 143 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 PLCE1Q9P212 2302 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 SDHAF1A6NFY7 115 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 ZNF561-AS1K7EIQ3 104 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 TNFRSF13BO14836 293 aaPredicted RBP8.03□□□□□ -1.12
PKP4-201ENST00000389757 CTSGP08311 255 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 HLA-DMBP28068 263 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 APRG1Q8IVJ8 170 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 WFDC11Q8NEX6 87 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 RMI2Q96E14 147 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 C17orf77Q96MU5 243 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 ATRXP46100 2492 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 M0R2P5 195 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 PAX2Q02962 417 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 PIFOQ8TCI5 191 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 ZC2HC1AQ96GY0 325 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 TIMM21Q9BVV7 248 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 MYMXA0A1B0GTQ4 84 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 DNAJC9-AS1A6NH13 148 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 VWC2Q2TAL6 325 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 PRSS57Q6UWY2 283 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 DYNAPQ8N1N2 210 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 AGPAT4-IT1Q9H0P7 198 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 TP53TG1Q9Y2A0 90 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 LENEPQ9Y5L5 61 aa8.03□□□□□ -1.12
PKP4-201ENST00000389757 PRIMA1Q86XR5 153 aa8.02□□□□□ -1.13
PKP4-201ENST00000389757 IL15RAQ13261 267 aa8.02□□□□□ -1.13
PKP4-201ENST00000389757 NOP10Q9NPE3 64 aaKnown RBP8.02□□□□□ -1.13
PKP4-201ENST00000389757 A6NDX4 124 aa8.02□□□□□ -1.13
PKP4-201ENST00000389757 EREGO14944 169 aa8.02□□□□□ -1.13
PKP4-201ENST00000389757 WIPF2Q8TF74 440 aaPredicted RBP8.02□□□□□ -1.13
PKP4-201ENST00000389757 GSN-AS1Q9NRJ2 163 aa8.02□□□□□ -1.13
PKP4-201ENST00000389757 DENND4AQ7Z401 1863 aa8.02□□□□□ -1.13
PKP4-201ENST00000389757 RBAKDNA6NC62 111 aa8.02□□□□□ -1.13
PKP4-201ENST00000389757 IGKV1-17P01599 117 aa8.02□□□□□ -1.13
PKP4-201ENST00000389757 SRSF2Q01130 221 aaKnown RBP8.02□□□□□ -1.13
PKP4-201ENST00000389757 HIST3H2BBQ8N257 126 aa8.02□□□□□ -1.13
PKP4-201ENST00000389757 C5orf30Q96GV9 206 aa8.02□□□□□ -1.13
PKP4-201ENST00000389757 IGF2RP11717 2491 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 GAGE6Q13070 117 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 C11orf52Q96A22 123 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 KIAA1549LQ6ZVL6 1849 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 IGHV3-38A0A0C4DH36 116 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 IGLV2-23P01705 113 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 C2orf66Q6UXQ4 117 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 C22orf34Q6ZV56 151 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 PCDH15Q96QU1 1955 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 C10orf142B7Z368 130 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 IGHV4-31P0DP07 118 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 RHOHQ15669 191 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 TYMSP04818 313 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 NPC2P61916 151 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 Q8N8P6 123 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 SPCS1Q9Y6A9 102 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 FREM1Q5H8C1 2179 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 A0A1B0GWB2 263 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 CRYGCP07315 174 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 SFTA2Q6UW10 78 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 C4orf3Q8WVX3 66 aa8.01□□□□□ -1.13
PKP4-201ENST00000389757 DOCK11Q5JSL3 2073 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms