RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 ZFYVE9O95405 1425 aa0.21□□□□□ -2.38
RNU6-39P-201ENST00000384344 WIZO95785 1651 aa0.21□□□□□ -2.38
RNU6-39P-201ENST00000384344 DIP2AQ14689 1571 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 SCN8AQ9UQD0 1980 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 A0A096LPI6 279 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 ZNF727A8MUV8 499 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 AIPO00170 330 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 NDUFC2O95298 119 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 IFNA4P05014 189 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 NFYBP25208 207 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 SCGB2B2Q4G0G5 96 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 GLIPR1L1Q6UWM5 242 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 LRRC18Q8N456 261 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 HYLS1Q96M11 299 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 PRAP1Q96NZ9 151 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 MAGI2Q86UL8 1455 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 MYOM1P52179 1685 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 KNL1Q8NG31 2342 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 EEA1Q15075 1411 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 FAM135BQ49AJ0 1406 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 CITO14578 2027 aa0.2□□□□□ -2.38
RNU6-39P-201ENST00000384344 DNAH9Q9NYC9 4486 aa0.19□□□□□ -2.38
RNU6-39P-201ENST00000384344 PLECQ15149 4684 aaKnown RBP0.19□□□□□ -2.38
RNU6-39P-201ENST00000384344 DUXBA0A1W2PPF3 345 aa0.19□□□□□ -2.38
RNU6-39P-201ENST00000384344 B4DSR2 109 aa0.19□□□□□ -2.38
RNU6-39P-201ENST00000384344 BANF1O75531 89 aa0.19□□□□□ -2.38
RNU6-39P-201ENST00000384344 HSPE1P61604 102 aaKnown RBP0.19□□□□□ -2.38
RNU6-39P-201ENST00000384344 PHB2Q99623 299 aa0.19□□□□□ -2.38
RNU6-39P-201ENST00000384344 C9orf16Q9BUW7 83 aa0.19□□□□□ -2.38
RNU6-39P-201ENST00000384344 CACYBPQ9HB71 228 aaKnown RBP0.19□□□□□ -2.38
RNU6-39P-201ENST00000384344 KIF1BO60333 1816 aa0.19□□□□□ -2.38
RNU6-39P-201ENST00000384344 KIAA0556O60303 1618 aa0.19□□□□□ -2.38
RNU6-39P-201ENST00000384344 C10orf71Q711Q0 1435 aa0.19□□□□□ -2.38
RNU6-39P-201ENST00000384344 DMDP11532 3685 aa0.19□□□□□ -2.38
RNU6-39P-201ENST00000384344 RFX7Q2KHR2 1363 aa0.19□□□□□ -2.38
RNU6-39P-201ENST00000384344 WNK2Q9Y3S1 2297 aa0.18□□□□□ -2.38
RNU6-39P-201ENST00000384344 DCAF1Q9Y4B6 1507 aa0.18□□□□□ -2.38
RNU6-39P-201ENST00000384344 UNC13CQ8NB66 2214 aa0.18□□□□□ -2.38
RNU6-39P-201ENST00000384344 CHD3Q12873 2000 aaKnown RBP0.18□□□□□ -2.38
RNU6-39P-201ENST00000384344 VIRMAQ69YN4 1812 aaKnown RBP0.18□□□□□ -2.38
RNU6-39P-201ENST00000384344 CMYA5Q8N3K9 4069 aa0.18□□□□□ -2.38
RNU6-39P-201ENST00000384344 LYRM1O43325 122 aa0.18□□□□□ -2.38
RNU6-39P-201ENST00000384344 CCL4P13236 92 aa0.18□□□□□ -2.38
RNU6-39P-201ENST00000384344 FXYD4P59646 89 aa0.18□□□□□ -2.38
RNU6-39P-201ENST00000384344 KLRD1Q13241 179 aa0.18□□□□□ -2.38
RNU6-39P-201ENST00000384344 EIF3IQ13347 325 aaKnown RBP0.18□□□□□ -2.38
RNU6-39P-201ENST00000384344 Q6ZQY7 126 aa0.18□□□□□ -2.38
RNU6-39P-201ENST00000384344 PPTC7Q8NI37 304 aa0.18□□□□□ -2.38
RNU6-39P-201ENST00000384344 MAP1LC3BQ9GZQ8 125 aa0.18□□□□□ -2.38
RNU6-39P-201ENST00000384344 ANK2Q01484 3957 aa0.18□□□□□ -2.38
RNU6-39P-201ENST00000384344 PLCE1Q9P212 2302 aa0.18□□□□□ -2.38
RNU6-39P-201ENST00000384344 PKDREJQ9NTG1 2253 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 SHROOM2Q13796 1616 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 DNAH5Q8TE73 4624 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 hDV103S1A0JD37 113 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 GPR31O00270 319 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 IFNA14P01570 189 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 CD14P08571 375 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 CST2P09228 141 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 NCALDP61601 193 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 REEP5Q00765 189 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 OCIAD2Q56VL3 154 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 PATE2Q6UY27 113 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 LINC00299Q6ZSB3 139 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 RB1CC1Q8TDY2 1594 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 ZHX1-C8orf76Q96EF9 292 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 OR2J1Q9GZK6 312 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 LAMC3Q9Y6N6 1575 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 TULP4Q9NRJ4 1543 aa0.17□□□□□ -2.38
RNU6-39P-201ENST00000384344 PHRF1Q9P1Y6 1649 aaKnown RBP0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 FAT1Q14517 4588 aa0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 FAT2Q9NYQ8 4349 aa0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 PPIP5K1Q6PFW1 1433 aa0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 SIP14410 1827 aa0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 G3V2T6 193 aa0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 IGLV1-51P01701 117 aa0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 APOA2P02652 100 aa0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 CRHP06850 196 aa0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 TMBIM6P55061 237 aa0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 MRPS25P82663 173 aaKnown RBP0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 QRFPP83859 136 aa0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 SPINK6Q6UWN8 80 aa0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 Q86TA4 180 aa0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 FAM103A1Q9BTL3 118 aaKnown RBP0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 PYCARDQ9ULZ3 195 aa0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 MYH7BA7E2Y1 1941 aa0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 CPS1P31327 1500 aa0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 KIDINS220Q9ULH0 1771 aa0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 LAMC1P11047 1609 aa0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 TCOF1Q13428 1488 aaKnown RBP0.16□□□□□ -2.38
RNU6-39P-201ENST00000384344 SMARCA2P51531 1590 aa0.15□□□□□ -2.38
RNU6-39P-201ENST00000384344 ADAMTS12P58397 1594 aa0.15□□□□□ -2.38
RNU6-39P-201ENST00000384344 APOBP04114 4563 aaKnown RBP0.15□□□□□ -2.38
RNU6-39P-201ENST00000384344 AKAP9Q99996 3911 aa0.15□□□□□ -2.38
RNU6-39P-201ENST00000384344 UHRF1BP1Q6BDS2 1440 aa0.15□□□□□ -2.39
RNU6-39P-201ENST00000384344 TRAV5A0A0B4J249 113 aa0.15□□□□□ -2.39
RNU6-39P-201ENST00000384344 RER1O15258 196 aa0.15□□□□□ -2.39
RNU6-39P-201ENST00000384344 SPCS2Q15005 226 aa0.15□□□□□ -2.39
RNU6-39P-201ENST00000384344 TMED2Q15363 201 aa0.15□□□□□ -2.39
RNU6-39P-201ENST00000384344 Q5VSD8 79 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms