RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 HERVK_113P61574 105 aa14.94□□□□□ -0.02
CSPG5-202ENST00000383738 TRAV8-2A0A0B4J237 113 aa14.93□□□□□ -0.02
CSPG5-202ENST00000383738 MINOS1Q5TGZ0 78 aa14.93□□□□□ -0.02
CSPG5-202ENST00000383738 Q6ZSR3 168 aa14.93□□□□□ -0.02
CSPG5-202ENST00000383738 C8orf49Q96NF6 230 aa14.93□□□□□ -0.02
CSPG5-202ENST00000383738 MINOS1-NBL1R4GNA1 71 aa14.93□□□□□ -0.02
CSPG5-202ENST00000383738 TMEM158Q8WZ71 300 aa14.93□□□□□ -0.02
CSPG5-202ENST00000383738 UBE2E1P51965 193 aa14.93□□□□□ -0.02
CSPG5-202ENST00000383738 PAX8Q06710 450 aa14.93□□□□□ -0.02
CSPG5-202ENST00000383738 C8orf46Q8TAG6 207 aa14.93□□□□□ -0.02
CSPG5-202ENST00000383738 FAM90A9PA6NNJ1 464 aa14.92□□□□□ -0.02
CSPG5-202ENST00000383738 GDF5OSQ5U4N7 250 aa14.92□□□□□ -0.02
CSPG5-202ENST00000383738 LINC01356Q8N9X3 169 aa14.92□□□□□ -0.02
CSPG5-202ENST00000383738 IGHV4-38-2P0DP08 117 aa14.92□□□□□ -0.02
CSPG5-202ENST00000383738 ANAPC13Q9BS18 74 aa14.92□□□□□ -0.02
CSPG5-202ENST00000383738 USP34Q70CQ2 3546 aa14.92□□□□□ -0.02
CSPG5-202ENST00000383738 IGHV1-69DA0A0B4J2H0 117 aa14.92□□□□□ -0.02
CSPG5-202ENST00000383738 IGHV1-69P01742 117 aa14.92□□□□□ -0.02
CSPG5-202ENST00000383738 Q86TA4 180 aa14.92□□□□□ -0.02
CSPG5-202ENST00000383738 PROP1O75360 226 aa14.91□□□□□ -0.02
CSPG5-202ENST00000383738 ZNF833PQ6ZTB9 187 aa14.91□□□□□ -0.02
CSPG5-202ENST00000383738 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.91□□□□□ -0.02
CSPG5-202ENST00000383738 K7EP34 96 aa14.91□□□□□ -0.02
CSPG5-202ENST00000383738 ZNF688P0C7X2 276 aa14.91□□□□□ -0.02
CSPG5-202ENST00000383738 A0A1W2PPM0 123 aa14.9□□□□□ -0.02
CSPG5-202ENST00000383738 C2orf70A6NJV1 201 aa14.9□□□□□ -0.02
CSPG5-202ENST00000383738 H3BRM9 83 aa14.9□□□□□ -0.02
CSPG5-202ENST00000383738 SPINK8P0C7L1 97 aa14.9□□□□□ -0.02
CSPG5-202ENST00000383738 PRORYQ9H606 182 aa14.9□□□□□ -0.02
CSPG5-202ENST00000383738 KAAG1Q9UBP8 84 aa14.9□□□□□ -0.02
CSPG5-202ENST00000383738 OVOL3O00110 214 aa14.9□□□□□ -0.02
CSPG5-202ENST00000383738 SIGLEC8Q9NYZ4 499 aa14.9□□□□□ -0.02
CSPG5-202ENST00000383738 SPRY2O43597 315 aa14.9□□□□□ -0.02
CSPG5-202ENST00000383738 TOMM40O96008 361 aa14.9□□□□□ -0.02
CSPG5-202ENST00000383738 RAB9AP51151 201 aa14.9□□□□□ -0.02
CSPG5-202ENST00000383738 ZNF562Q6V9R5 426 aa14.9□□□□□ -0.02
CSPG5-202ENST00000383738 NDUFA4L2Q9NRX3 87 aa14.9□□□□□ -0.02
CSPG5-202ENST00000383738 ZNF815PA8K554 130 aa14.89□□□□□ -0.03
CSPG5-202ENST00000383738 HOXA3O43365 443 aaPredicted RBP14.89□□□□□ -0.03
CSPG5-202ENST00000383738 ZNF747Q9BV97 191 aa14.89□□□□□ -0.03
CSPG5-202ENST00000383738 PGPEP1Q9NXJ5 209 aa14.89□□□□□ -0.03
CSPG5-202ENST00000383738 CTRLP40313 264 aa14.89□□□□□ -0.03
CSPG5-202ENST00000383738 FXYD5Q96DB9 178 aa14.89□□□□□ -0.03
CSPG5-202ENST00000383738 PSMB11A5LHX3 300 aa14.89□□□□□ -0.03
CSPG5-202ENST00000383738 DUX3Q96PT4 197 aa14.89□□□□□ -0.03
CSPG5-202ENST00000383738 GTSF1Q8WW33 167 aa14.88□□□□□ -0.03
CSPG5-202ENST00000383738 FRYQ5TBA9 3013 aa14.88□□□□□ -0.03
CSPG5-202ENST00000383738 GAGE12HA6NDE8 117 aa14.88□□□□□ -0.03
CSPG5-202ENST00000383738 SH2D1AO60880 128 aa14.88□□□□□ -0.03
CSPG5-202ENST00000383738 IGHV4-59P01825 116 aa14.88□□□□□ -0.03
CSPG5-202ENST00000383738 DSCR9P59020 149 aa14.88□□□□□ -0.03
CSPG5-202ENST00000383738 BLCAPP62952 87 aa14.88□□□□□ -0.03
CSPG5-202ENST00000383738 NBEAQ8NFP9 2946 aa14.88□□□□□ -0.03
CSPG5-202ENST00000383738 SLC25A16P16260 332 aa14.88□□□□□ -0.03
CSPG5-202ENST00000383738 WFDC2Q14508 124 aa14.88□□□□□ -0.03
CSPG5-202ENST00000383738 DDB2Q92466 427 aa14.88□□□□□ -0.03
CSPG5-202ENST00000383738 ATP5LO75964 103 aa14.88□□□□□ -0.03
CSPG5-202ENST00000383738 E7EUB6 86 aa14.87□□□□□ -0.03
CSPG5-202ENST00000383738 DAZAP2Q15038 168 aaPredicted RBP14.87□□□□□ -0.03
CSPG5-202ENST00000383738 TNRC18O15417 2968 aaPredicted RBP14.87□□□□□ -0.03
CSPG5-202ENST00000383738 SNCGO76070 127 aa14.87□□□□□ -0.03
CSPG5-202ENST00000383738 IGLC1P0CG04 106 aa14.87□□□□□ -0.03
CSPG5-202ENST00000383738 SNRPD3P62318 126 aaKnown RBP14.87□□□□□ -0.03
CSPG5-202ENST00000383738 PIP4P2Q8N4L2 257 aa14.87□□□□□ -0.03
CSPG5-202ENST00000383738 NPYP01303 97 aa14.87□□□□□ -0.03
CSPG5-202ENST00000383738 SYNJ2BPP57105 145 aa14.87□□□□□ -0.03
CSPG5-202ENST00000383738 SPATA12Q7Z6I5 190 aa14.87□□□□□ -0.03
CSPG5-202ENST00000383738 TRAV26-2A0A0B4J265 109 aa14.86□□□□□ -0.03
CSPG5-202ENST00000383738 FABP5P3A8MUU1 101 aa14.86□□□□□ -0.03
CSPG5-202ENST00000383738 RNASE4P34096 147 aaKnown RBP14.86□□□□□ -0.03
CSPG5-202ENST00000383738 ZNF256Q9Y2P7 627 aaPredicted RBP14.86□□□□□ -0.03
CSPG5-202ENST00000383738 GATA1P15976 413 aaPredicted RBP14.86□□□□□ -0.03
CSPG5-202ENST00000383738 LINC00322Q6ZN03 302 aaPredicted RBP14.86□□□□□ -0.03
CSPG5-202ENST00000383738 ZNF503Q96F45 646 aa14.86□□□□□ -0.03
CSPG5-202ENST00000383738 MRPL36Q9P0J6 103 aaKnown RBP14.86□□□□□ -0.03
CSPG5-202ENST00000383738 GEMIN7Q9H840 131 aaKnown RBP14.86□□□□□ -0.03
CSPG5-202ENST00000383738 ERCC8Q13216 396 aa14.85□□□□□ -0.03
CSPG5-202ENST00000383738 PATE2Q6UY27 113 aa14.85□□□□□ -0.03
CSPG5-202ENST00000383738 USP24Q9UPU5 2620 aa14.85□□□□□ -0.03
CSPG5-202ENST00000383738 LOXL1Q08397 574 aaPredicted RBP14.85□□□□□ -0.03
CSPG5-202ENST00000383738 RAX2Q96IS3 184 aa14.85□□□□□ -0.03
CSPG5-202ENST00000383738 Q6AWC8 147 aa14.85□□□□□ -0.03
CSPG5-202ENST00000383738 SYT8Q8NBV8 401 aa14.85□□□□□ -0.03
CSPG5-202ENST00000383738 DEFB112Q30KQ8 113 aa14.85□□□□□ -0.03
CSPG5-202ENST00000383738 PSMG4Q5JS54 123 aa14.85□□□□□ -0.03
CSPG5-202ENST00000383738 PVRIGQ6DKI7 326 aa14.85□□□□□ -0.03
CSPG5-202ENST00000383738 DGAT2L7PQ6IED9 249 aa14.85□□□□□ -0.03
CSPG5-202ENST00000383738 DMXL2Q8TDJ6 3036 aa14.84□□□□□ -0.03
CSPG5-202ENST00000383738 LGALS3P17931 250 aaKnown RBP14.84□□□□□ -0.03
CSPG5-202ENST00000383738 RPS20P60866 119 aaKnown RBP14.84□□□□□ -0.03
CSPG5-202ENST00000383738 FAM231DQ6ZW35 169 aa14.84□□□□□ -0.03
CSPG5-202ENST00000383738 A0A0U1RRA0 63 aa14.84□□□□□ -0.03
CSPG5-202ENST00000383738 MRPL51Q4U2R6 128 aaKnown RBP14.84□□□□□ -0.03
CSPG5-202ENST00000383738 TEX29Q8N6K0 151 aa14.84□□□□□ -0.03
CSPG5-202ENST00000383738 FXYD2P54710 66 aa14.84□□□□□ -0.03
CSPG5-202ENST00000383738 NPC2P61916 151 aa14.84□□□□□ -0.03
CSPG5-202ENST00000383738 FAM159AQ6UWV7 190 aa14.83□□□□□ -0.03
CSPG5-202ENST00000383738 C1orf229Q6ZS94 237 aaPredicted RBP14.83□□□□□ -0.03
CSPG5-202ENST00000383738 RNF182Q8N6D2 247 aa14.83□□□□□ -0.03
CSPG5-202ENST00000383738 SCRT2Q9NQ03 307 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms