RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 ZNRD1Q9P1U0 126 aa11.14□□□□□ -0.63
SNPH-201ENST00000381867 GAGE12JA6NER3 117 aa11.13□□□□□ -0.63
SNPH-201ENST00000381867 GAGE7O76087 117 aa11.13□□□□□ -0.63
SNPH-201ENST00000381867 GAGE12FP0CL80 117 aa11.13□□□□□ -0.63
SNPH-201ENST00000381867 GAGE12GP0CL81 117 aa11.13□□□□□ -0.63
SNPH-201ENST00000381867 GAGE12IP0CL82 117 aa11.13□□□□□ -0.63
SNPH-201ENST00000381867 WT1P19544 449 aaPredicted RBP11.13□□□□□ -0.63
SNPH-201ENST00000381867 UBE2E1P51965 193 aa11.13□□□□□ -0.63
SNPH-201ENST00000381867 GAGE4Q13068 117 aa11.13□□□□□ -0.63
SNPH-201ENST00000381867 C12orf74Q32Q52 190 aa11.13□□□□□ -0.63
SNPH-201ENST00000381867 RUSC1-AS1Q66K80 236 aa11.13□□□□□ -0.63
SNPH-201ENST00000381867 KNCNA6PVL3 124 aa11.13□□□□□ -0.63
SNPH-201ENST00000381867 TMEM126AQ9H061 195 aa11.13□□□□□ -0.63
SNPH-201ENST00000381867 NDUFS7O75251 213 aa11.13□□□□□ -0.63
SNPH-201ENST00000381867 RPL32P62910 135 aaKnown RBP11.13□□□□□ -0.63
SNPH-201ENST00000381867 HAMPP81172 84 aa11.13□□□□□ -0.63
SNPH-201ENST00000381867 ANKRD29Q8N6D5 301 aa11.13□□□□□ -0.63
SNPH-201ENST00000381867 ZC2HC1AQ96GY0 325 aa11.13□□□□□ -0.63
SNPH-201ENST00000381867 PYGO2Q9BRQ0 406 aa11.13□□□□□ -0.63
SNPH-201ENST00000381867 DEFB131AP59861 70 aa11.12□□□□□ -0.63
SNPH-201ENST00000381867 LYPD6BQ8NI32 183 aa11.12□□□□□ -0.63
SNPH-201ENST00000381867 IGLV3-1P01715 115 aa11.12□□□□□ -0.63
SNPH-201ENST00000381867 KLF5Q13887 457 aaPredicted RBP11.12□□□□□ -0.63
SNPH-201ENST00000381867 AMTNQ6UX39 209 aa11.12□□□□□ -0.63
SNPH-201ENST00000381867 KIAA1549LQ6ZVL6 1849 aa11.12□□□□□ -0.63
SNPH-201ENST00000381867 J3QQQ9 107 aa11.12□□□□□ -0.63
SNPH-201ENST00000381867 TRBV25-1A0A075B6N4 114 aa11.12□□□□□ -0.63
SNPH-201ENST00000381867 PFN2P35080 140 aa11.12□□□□□ -0.63
SNPH-201ENST00000381867 SYNJ2BPP57105 145 aa11.12□□□□□ -0.63
SNPH-201ENST00000381867 WIPF2Q8TF74 440 aaPredicted RBP11.12□□□□□ -0.63
SNPH-201ENST00000381867 SPTBN1Q01082 2364 aaKnown RBP11.12□□□□□ -0.63
SNPH-201ENST00000381867 ATP6V0E1O15342 81 aa11.11□□□□□ -0.63
SNPH-201ENST00000381867 C8orf86Q6ZUL3 223 aa11.11□□□□□ -0.63
SNPH-201ENST00000381867 LINC00311Q8N616 119 aa11.11□□□□□ -0.63
SNPH-201ENST00000381867 IGHG4P01861 327 aa11.11□□□□□ -0.63
SNPH-201ENST00000381867 GAGE5Q13069 117 aa11.11□□□□□ -0.63
SNPH-201ENST00000381867 C15orf53Q8NAA6 179 aa11.11□□□□□ -0.63
SNPH-201ENST00000381867 MRAPQ8TCY5 172 aa11.11□□□□□ -0.63
SNPH-201ENST00000381867 FXYD5Q96DB9 178 aa11.11□□□□□ -0.63
SNPH-201ENST00000381867 DKK2Q9UBU2 259 aa11.11□□□□□ -0.63
SNPH-201ENST00000381867 IGHV1OR15-1A0A075B7D0 117 aa11.11□□□□□ -0.63
SNPH-201ENST00000381867 WIPF3A6NGB9 483 aa11.11□□□□□ -0.63
SNPH-201ENST00000381867 KAAG1Q9UBP8 84 aa11.11□□□□□ -0.63
SNPH-201ENST00000381867 C20orf78Q9BR46 151 aa11.11□□□□□ -0.63
SNPH-201ENST00000381867 TRAV13-2A0A0B4J235 113 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 PCNX2A6NKB5 2137 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 ANXA2RQ3ZCQ2 193 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 CDPF1Q6NVV7 123 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 DEFB125Q8N687 156 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 NTN5Q8WTR8 489 aaPredicted RBP11.1□□□□□ -0.63
SNPH-201ENST00000381867 K7EN84 100 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 SPINK13Q1W4C9 94 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 IL15RAQ13261 267 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 Q6ZR03 302 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 THAP8Q8NA92 274 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 KLK9Q9UKQ9 250 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 IGHV2-70DA0A0C4DH43 119 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 CR1LQ2VPA4 569 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 ZNF747Q9BV97 191 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 ABCA4P78363 2273 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 POLEQ07864 2286 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 CRLF1O75462 422 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 DEFB130BP0DP73 79 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 DEFB130AP0DP74 79 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 COA6Q5JTJ3 125 aaKnown RBP11.1□□□□□ -0.63
SNPH-201ENST00000381867 ZNF524Q96C55 264 aa11.1□□□□□ -0.63
SNPH-201ENST00000381867 K7EM74 188 aa11.09□□□□□ -0.63
SNPH-201ENST00000381867 C17orf58Q2M2W7 97 aa11.09□□□□□ -0.63
SNPH-201ENST00000381867 CCL25O15444 150 aa11.09□□□□□ -0.63
SNPH-201ENST00000381867 LTAP01374 205 aa11.09□□□□□ -0.63
SNPH-201ENST00000381867 SUMO4Q6EEV6 95 aa11.09□□□□□ -0.63
SNPH-201ENST00000381867 DOCK9Q9BZ29 2069 aa11.09□□□□□ -0.63
SNPH-201ENST00000381867 WT1-ASQ06250 92 aa11.09□□□□□ -0.63
SNPH-201ENST00000381867 PLXND1Q9Y4D7 1925 aa11.09□□□□□ -0.63
SNPH-201ENST00000381867 PLA2G5P39877 138 aa11.08□□□□□ -0.64
SNPH-201ENST00000381867 GAGE6Q13070 117 aa11.08□□□□□ -0.64
SNPH-201ENST00000381867 IGHV3-16A0A0C4DH30 117 aa11.08□□□□□ -0.64
SNPH-201ENST00000381867 PRR20EP86478 221 aa11.08□□□□□ -0.64
SNPH-201ENST00000381867 PRR20CP86479 221 aa11.08□□□□□ -0.64
SNPH-201ENST00000381867 PRR20DP86480 221 aa11.08□□□□□ -0.64
SNPH-201ENST00000381867 PRR20BP86481 221 aa11.08□□□□□ -0.64
SNPH-201ENST00000381867 PRR20AP86496 221 aa11.08□□□□□ -0.64
SNPH-201ENST00000381867 TMEM243Q9BU79 118 aa11.08□□□□□ -0.64
SNPH-201ENST00000381867 MYO7BQ6PIF6 2116 aa11.07□□□□□ -0.64
SNPH-201ENST00000381867 DSCR8Q96T75 97 aa11.07□□□□□ -0.64
SNPH-201ENST00000381867 DOCK11Q5JSL3 2073 aa11.07□□□□□ -0.64
SNPH-201ENST00000381867 KIAA2026Q5HYC2 2103 aa11.07□□□□□ -0.64
SNPH-201ENST00000381867 IGHV1-69DA0A0B4J2H0 117 aa11.07□□□□□ -0.64
SNPH-201ENST00000381867 A0A1W2PNU3 283 aaPredicted RBP11.07□□□□□ -0.64
SNPH-201ENST00000381867 IGHV1-69P01742 117 aa11.07□□□□□ -0.64
SNPH-201ENST00000381867 CFC1BP0CG36 223 aa11.07□□□□□ -0.64
SNPH-201ENST00000381867 CFC1P0CG37 223 aa11.07□□□□□ -0.64
SNPH-201ENST00000381867 ZNF561-AS1K7EIQ3 104 aa11.07□□□□□ -0.64
SNPH-201ENST00000381867 WISP1O95388 367 aa11.07□□□□□ -0.64
SNPH-201ENST00000381867 CRYBA4P53673 196 aa11.07□□□□□ -0.64
SNPH-201ENST00000381867 SRSF2Q01130 221 aaKnown RBP11.07□□□□□ -0.64
SNPH-201ENST00000381867 WDR86Q86TI4 376 aa11.07□□□□□ -0.64
SNPH-201ENST00000381867 MED12Q93074 2177 aa11.07□□□□□ -0.64
SNPH-201ENST00000381867 HERVK_113P63121 156 aa11.07□□□□□ -0.64
SNPH-201ENST00000381867 Q6ZVH6 145 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms