RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 TRAV12-3A0A0B4J271 114 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 SOCS3O14543 225 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 CGAP01215 116 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 ZAR1Q86SH2 424 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 C12orf77C9JDV5 145 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 E9PLD3 99 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 ZNHIT1O43257 154 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 TFF3Q07654 80 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 C1orf147Q96MC9 270 aaPredicted RBP3.96□□□□□ -1.78
PTPRD-203ENST00000381196 NBL1P41271 181 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 UBL5Q9BZL1 73 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 TRAV8-1A0A0A6YYK1 113 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 TRAV24A0A0B4J272 114 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 A0A0J9YX75 114 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 C4orf51C9J302 202 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 C9orf106Q8NAJ2 232 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 LINC01587Q99440 93 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 TRAV40A0A0B4J280 105 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 TIMM17AQ99595 171 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 SCRT1Q9BWW7 348 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 FAM222AQ5U5X8 452 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 LINC01356Q8N9X3 169 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 LY6G5BQ8NDX9 201 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 SRRM5B3KS81 715 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 IGHV3-11P01762 117 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 PLA2G5P39877 138 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 FHL1Q13642 323 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 LYPD6Q86Y78 171 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 USMG5Q96IX5 58 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 MLST8Q9BVC4 326 aa3.96□□□□□ -1.78
PTPRD-203ENST00000381196 PSCAO43653 123 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 Q6ZUT4 128 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 C1QL2Q7Z5L3 287 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 CCL3L1P16619 93 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 NDUFS7O75251 213 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 ZNF747Q9BV97 191 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 C17orf100A8MU93 164 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 RFPL3SP0C7P2 107 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 TMEM256Q8N2U0 113 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 A0A0A6YYD4 124 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 M0R1W7 72 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 IGKV1D-33P01593 117 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 IGKV1-33P01594 117 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 FAM219BQ5XKK7 198 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 TRPT1Q86TN4 253 aaKnown RBP3.95□□□□□ -1.78
PTPRD-203ENST00000381196 STHQ8IWL8 128 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 U3KQK5 164 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 IGKV1-9A0A0C4DH69 117 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 C15orf62A8K5M9 175 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 PSG7Q13046 419 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 CGB1A6NKQ9 187 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 NTN3O00634 580 aaPredicted RBP3.95□□□□□ -1.78
PTPRD-203ENST00000381196 IGKV3-20P01619 116 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 CD28P10747 220 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 IGLL1P15814 213 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 PIK3CD-AS1Q5SR53 167 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 SUMO4Q6EEV6 95 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 FLVCR1-AS1Q8TAF5 88 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 CHCHD2Q9Y6H1 151 aaPredicted RBP3.95□□□□□ -1.78
PTPRD-203ENST00000381196 TAX1BP3O14907 124 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 NDUFA7O95182 113 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 IGKV1-5P01602 117 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 LINC00158P58513 81 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 CRIM1Q9NZV1 1036 aa3.95□□□□□ -1.78
PTPRD-203ENST00000381196 ADARB2-AS1A8MUL3 147 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 FOXG1P55316 489 aaPredicted RBP3.94□□□□□ -1.78
PTPRD-203ENST00000381196 IGF2BP2-AS1Q96M15 143 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 CLUHP3Q96NS8 147 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 IGHV3OR16-13A0A075B7E8 117 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 IGHV3-74A0A0B4J1X5 117 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 IGLL5B9A064 214 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 SAA1P0DJI8 122 aaPredicted RBP3.94□□□□□ -1.78
PTPRD-203ENST00000381196 NABP1Q96AH0 204 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 TIMM21Q9BVV7 248 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 C21orf62Q9NYP8 219 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 A0A1B0GXF2 115 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 MED19A0JLT2 244 aaPredicted RBP3.94□□□□□ -1.78
PTPRD-203ENST00000381196 RNF223E7ERA6 249 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 K7ENP7 123 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 FAM216BQ8N7L0 139 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 MCRIP2Q9BUT9 160 aaKnown RBP3.94□□□□□ -1.78
PTPRD-203ENST00000381196 TMEM158Q8WZ71 300 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 AMELYQ99218 206 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 TRGV4A0A0C4DH28 118 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 NDUFB1O75438 58 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 PRSS57Q6UWY2 283 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 PRRC2CQ9Y520 2896 aaKnown RBP3.94□□□□□ -1.78
PTPRD-203ENST00000381196 BUB3O43684 328 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 GTSF1Q8WW33 167 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 COL4A3Q01955 1670 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 TRAV3A0A0B4J244 114 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 A0A1B0GW54 56 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 C11orf86A6NJI1 115 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 C3orf22Q8N5N4 141 aa3.94□□□□□ -1.78
PTPRD-203ENST00000381196 FOXE3Q13461 319 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 ODF3Q96PU9 254 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 CHCHD5Q9BSY4 110 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 A0A0U1RQV1 116 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 D6R8Y8 96 aa3.93□□□□□ -1.78
PTPRD-203ENST00000381196 CHKB-CPT1BH3BT56 60 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms