RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 SIGLEC15Q6ZMC9 328 aa11.04□□□□□ -0.64
CLCN4-201ENST00000380829 Q71RC1 249 aaPredicted RBP11.04□□□□□ -0.64
CLCN4-201ENST00000380829 ZNF414Q96IQ9 312 aa11.04□□□□□ -0.64
CLCN4-201ENST00000380829 CCDC140Q96MF4 163 aa11.04□□□□□ -0.64
CLCN4-201ENST00000380829 SIGMAR1Q99720 223 aa11.04□□□□□ -0.64
CLCN4-201ENST00000380829 HSPB8Q9UJY1 196 aa11.04□□□□□ -0.64
CLCN4-201ENST00000380829 TENM4Q6N022 2769 aa11.04□□□□□ -0.64
CLCN4-201ENST00000380829 LTAP01374 205 aa11.04□□□□□ -0.64
CLCN4-201ENST00000380829 SLC25A16P16260 332 aa11.04□□□□□ -0.64
CLCN4-201ENST00000380829 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.03□□□□□ -0.64
CLCN4-201ENST00000380829 TRAV41A0A0B4J266 112 aa11.03□□□□□ -0.64
CLCN4-201ENST00000380829 SMIM17P0DL12 118 aa11.03□□□□□ -0.64
CLCN4-201ENST00000380829 OR5A1Q8NGJ0 315 aa11.03□□□□□ -0.64
CLCN4-201ENST00000380829 ASCL2Q99929 193 aa11.03□□□□□ -0.64
CLCN4-201ENST00000380829 MLST8Q9BVC4 326 aa11.03□□□□□ -0.64
CLCN4-201ENST00000380829 M0R3E3 92 aa11.03□□□□□ -0.64
CLCN4-201ENST00000380829 RPP21Q9H633 154 aaKnown RBP11.03□□□□□ -0.64
CLCN4-201ENST00000380829 ZANQ9Y493 2812 aa11.02□□□□□ -0.64
CLCN4-201ENST00000380829 CHEK1O14757 476 aa11.02□□□□□ -0.65
CLCN4-201ENST00000380829 IGLV2-11P01706 119 aa11.02□□□□□ -0.65
CLCN4-201ENST00000380829 KLK9Q2XQG4 91 aa11.02□□□□□ -0.65
CLCN4-201ENST00000380829 PRNTQ86SH4 94 aa11.02□□□□□ -0.65
CLCN4-201ENST00000380829 Q86TA4 180 aa11.02□□□□□ -0.65
CLCN4-201ENST00000380829 OR8A1Q8NGG7 326 aa11.02□□□□□ -0.65
CLCN4-201ENST00000380829 KLK9Q9UKQ9 250 aa11.02□□□□□ -0.65
CLCN4-201ENST00000380829 CSPG4Q6UVK1 2322 aa11.02□□□□□ -0.65
CLCN4-201ENST00000380829 TRAV26-1A0A087WT03 109 aa11.01□□□□□ -0.65
CLCN4-201ENST00000380829 A0A096LNT2 108 aa11.01□□□□□ -0.65
CLCN4-201ENST00000380829 CIARTQ8N365 385 aaPredicted RBP11.01□□□□□ -0.65
CLCN4-201ENST00000380829 A6NDX4 124 aa11.01□□□□□ -0.65
CLCN4-201ENST00000380829 APOHP02749 345 aaPredicted RBP11.01□□□□□ -0.65
CLCN4-201ENST00000380829 SCGB1A1P11684 91 aa11.01□□□□□ -0.65
CLCN4-201ENST00000380829 SCGB2A2Q13296 93 aa11.01□□□□□ -0.65
CLCN4-201ENST00000380829 FAM106AQ4KMX7 169 aa11.01□□□□□ -0.65
CLCN4-201ENST00000380829 EEF1AKMT3Q96AZ1 226 aa11.01□□□□□ -0.65
CLCN4-201ENST00000380829 C18orf15Q96N68 181 aa11.01□□□□□ -0.65
CLCN4-201ENST00000380829 ZNF747Q9BV97 191 aa11.01□□□□□ -0.65
CLCN4-201ENST00000380829 HELZ2Q9BYK8 2649 aaKnown RBP11.01□□□□□ -0.65
CLCN4-201ENST00000380829 SERTM2A0A1B0GWG4 89 aa11□□□□□ -0.65
CLCN4-201ENST00000380829 GAGE12HA6NDE8 117 aa11□□□□□ -0.65
CLCN4-201ENST00000380829 FABP2P12104 132 aa11□□□□□ -0.65
CLCN4-201ENST00000380829 BLCAPP62952 87 aa11□□□□□ -0.65
CLCN4-201ENST00000380829 C19orf54Q5BKX5 351 aa11□□□□□ -0.65
CLCN4-201ENST00000380829 ADAMTSL5Q6ZMM2 481 aa11□□□□□ -0.65
CLCN4-201ENST00000380829 Q6ZS46 218 aa11□□□□□ -0.65
CLCN4-201ENST00000380829 LINC01356Q8N9X3 169 aa11□□□□□ -0.65
CLCN4-201ENST00000380829 ZFAND3Q9H8U3 227 aa11□□□□□ -0.65
CLCN4-201ENST00000380829 RNF223E7ERA6 249 aa11□□□□□ -0.65
CLCN4-201ENST00000380829 K7ERJ3 54 aa11□□□□□ -0.65
CLCN4-201ENST00000380829 RPL7P18124 248 aaKnown RBP11□□□□□ -0.65
CLCN4-201ENST00000380829 FXYD7P58549 80 aa11□□□□□ -0.65
CLCN4-201ENST00000380829 CKS1BP61024 79 aa11□□□□□ -0.65
CLCN4-201ENST00000380829 PCP2Q8IVA1 136 aa11□□□□□ -0.65
CLCN4-201ENST00000380829 LYPD1Q8N2G4 141 aa11□□□□□ -0.65
CLCN4-201ENST00000380829 FASNP49327 2511 aaKnown RBP11□□□□□ -0.65
CLCN4-201ENST00000380829 IGHV3-66A0A0C4DH42 116 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 A8MWL6 223 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 SMAD7O15105 426 aaKnown RBP10.99□□□□□ -0.65
CLCN4-201ENST00000380829 TGFAP01135 160 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 GATA3P23771 443 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 ATP5G2Q06055 141 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 LOXL1Q08397 574 aaPredicted RBP10.99□□□□□ -0.65
CLCN4-201ENST00000380829 PSG3Q16557 428 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 SAMD5Q5TGI4 173 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 IGFL4Q6B9Z1 124 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 BOD1L2Q8IYS8 172 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 IGHV3OR16-13A0A075B7E8 117 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 IGHV3-74A0A0B4J1X5 117 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.99□□□□□ -0.65
CLCN4-201ENST00000380829 P01737 135 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 TRGV3P03979 118 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 NMUP48645 174 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 CRYBA4P53673 196 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 PDE6HQ13956 83 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 AAMDCQ9H7C9 122 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 AP5S1Q9NUS5 200 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 SMAD5-AS1Q9Y6J3 95 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 DOPEY2Q9Y3R5 2298 aa10.99□□□□□ -0.65
CLCN4-201ENST00000380829 TRBV7-1A0A0A6YYK4 115 aa10.98□□□□□ -0.65
CLCN4-201ENST00000380829 K7EMI3 77 aa10.98□□□□□ -0.65
CLCN4-201ENST00000380829 NDFIP1Q9BT67 221 aa10.98□□□□□ -0.65
CLCN4-201ENST00000380829 IGHV3-49A0A0A0MS15 119 aa10.98□□□□□ -0.65
CLCN4-201ENST00000380829 CRIP2P52943 208 aaPredicted RBP10.98□□□□□ -0.65
CLCN4-201ENST00000380829 TMEM75Q8N9X5 138 aa10.98□□□□□ -0.65
CLCN4-201ENST00000380829 CLPSL1A2RUU4 121 aa10.97□□□□□ -0.65
CLCN4-201ENST00000380829 C19orf71A6NCJ1 209 aa10.97□□□□□ -0.65
CLCN4-201ENST00000380829 IGHG2P01859 326 aa10.97□□□□□ -0.65
CLCN4-201ENST00000380829 IGF1P05019 195 aa10.97□□□□□ -0.65
CLCN4-201ENST00000380829 CACNG7P62955 275 aa10.97□□□□□ -0.65
CLCN4-201ENST00000380829 CD300EQ496F6 205 aaPredicted RBP10.97□□□□□ -0.65
CLCN4-201ENST00000380829 RBPMS2Q6ZRY4 209 aaKnown RBP10.97□□□□□ -0.65
CLCN4-201ENST00000380829 MTURNQ8N3F0 131 aa10.97□□□□□ -0.65
CLCN4-201ENST00000380829 DAZAP1Q96EP5 407 aaKnown RBP10.97□□□□□ -0.65
CLCN4-201ENST00000380829 PSG8Q9UQ74 426 aa10.97□□□□□ -0.65
CLCN4-201ENST00000380829 K7EQM0 130 aa10.97□□□□□ -0.65
CLCN4-201ENST00000380829 DEFB112Q30KQ8 113 aa10.97□□□□□ -0.65
CLCN4-201ENST00000380829 PRSS22Q9GZN4 317 aa10.97□□□□□ -0.65
CLCN4-201ENST00000380829 ZNF492Q9P255 531 aa10.97□□□□□ -0.65
CLCN4-201ENST00000380829 NAV2Q8IVL1 2488 aa10.97□□□□□ -0.65
CLCN4-201ENST00000380829 A0A096LNJ9 63 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms