RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 IL17RELQ6ZVW7 336 aa8.46□□□□□ -1.06
NEDD9-201ENST00000379433 TMEM126AQ9H061 195 aa8.46□□□□□ -1.06
NEDD9-201ENST00000379433 Q9H3A6 140 aa8.46□□□□□ -1.06
NEDD9-201ENST00000379433 C21orf62Q9NYP8 219 aa8.46□□□□□ -1.06
NEDD9-201ENST00000379433 NAT8BQ9UHF3 227 aa8.46□□□□□ -1.06
NEDD9-201ENST00000379433 JMJD1CQ15652 2540 aa8.45□□□□□ -1.06
NEDD9-201ENST00000379433 H3BUX3 64 aa8.45□□□□□ -1.06
NEDD9-201ENST00000379433 PEX7O00628 323 aa8.45□□□□□ -1.06
NEDD9-201ENST00000379433 ATP5G2Q06055 141 aa8.45□□□□□ -1.06
NEDD9-201ENST00000379433 TAL2Q16559 108 aa8.45□□□□□ -1.06
NEDD9-201ENST00000379433 C8orf86Q6ZUL3 223 aa8.45□□□□□ -1.06
NEDD9-201ENST00000379433 Q8N9W7 124 aa8.45□□□□□ -1.06
NEDD9-201ENST00000379433 TMSB15BA0A087X1C1 80 aa8.45□□□□□ -1.06
NEDD9-201ENST00000379433 TRAV8-6A0A0B4J262 113 aa8.45□□□□□ -1.06
NEDD9-201ENST00000379433 COX6B1P14854 86 aa8.45□□□□□ -1.06
NEDD9-201ENST00000379433 ZNF329Q86UD4 541 aa8.45□□□□□ -1.06
NEDD9-201ENST00000379433 KLHDC1Q8N7A1 406 aa8.45□□□□□ -1.06
NEDD9-201ENST00000379433 FANCD2OSQ96PS1 177 aa8.45□□□□□ -1.06
NEDD9-201ENST00000379433 TIMM8BQ9Y5J9 83 aaPredicted RBP8.45□□□□□ -1.06
NEDD9-201ENST00000379433 C9JAW5 83 aa8.44□□□□□ -1.06
NEDD9-201ENST00000379433 TEX43Q6ZNM6 134 aa8.44□□□□□ -1.06
NEDD9-201ENST00000379433 ZNF843Q8N446 348 aa8.44□□□□□ -1.06
NEDD9-201ENST00000379433 C3orf56Q8N813 242 aa8.44□□□□□ -1.06
NEDD9-201ENST00000379433 UBR5O95071 2799 aaPredicted RBP8.44□□□□□ -1.06
NEDD9-201ENST00000379433 J3KT08 172 aa8.44□□□□□ -1.06
NEDD9-201ENST00000379433 AVPP01185 164 aa8.44□□□□□ -1.06
NEDD9-201ENST00000379433 LINC00694P0DN24 101 aa8.44□□□□□ -1.06
NEDD9-201ENST00000379433 TSPOP30536 169 aa8.44□□□□□ -1.06
NEDD9-201ENST00000379433 BLCAPP62952 87 aa8.44□□□□□ -1.06
NEDD9-201ENST00000379433 HRCT1Q6UXD1 115 aa8.44□□□□□ -1.06
NEDD9-201ENST00000379433 TRGV9Q99603 122 aa8.44□□□□□ -1.06
NEDD9-201ENST00000379433 MRPL32Q9BYC8 188 aaKnown RBP8.44□□□□□ -1.06
NEDD9-201ENST00000379433 SNURFLB1AK76 121 aa8.44□□□□□ -1.06
NEDD9-201ENST00000379433 RNF223E7ERA6 249 aa8.44□□□□□ -1.06
NEDD9-201ENST00000379433 FNDC10F2Z333 226 aa8.44□□□□□ -1.06
NEDD9-201ENST00000379433 Q6ZS46 218 aa8.44□□□□□ -1.06
NEDD9-201ENST00000379433 CIARTQ8N365 385 aaPredicted RBP8.44□□□□□ -1.06
NEDD9-201ENST00000379433 THAP8Q8NA92 274 aa8.44□□□□□ -1.06
NEDD9-201ENST00000379433 NPFFR1Q9GZQ6 430 aa8.44□□□□□ -1.06
NEDD9-201ENST00000379433 OVOL3O00110 214 aa8.43□□□□□ -1.06
NEDD9-201ENST00000379433 HLA-DMBP28068 263 aa8.43□□□□□ -1.06
NEDD9-201ENST00000379433 TEX29Q8N6K0 151 aa8.43□□□□□ -1.06
NEDD9-201ENST00000379433 C1RLQ9NZP8 487 aa8.43□□□□□ -1.06
NEDD9-201ENST00000379433 MRPS16Q9Y3D3 137 aaKnown RBP8.43□□□□□ -1.06
NEDD9-201ENST00000379433 TMEM8BA6NDV4 472 aa8.43□□□□□ -1.06
NEDD9-201ENST00000379433 RPL11P62913 178 aaKnown RBP8.43□□□□□ -1.06
NEDD9-201ENST00000379433 ZFAND6Q6FIF0 208 aa8.43□□□□□ -1.06
NEDD9-201ENST00000379433 WFDC3Q8IUB2 231 aa8.43□□□□□ -1.06
NEDD9-201ENST00000379433 TRBV24-1A0A075B6N3 115 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 C1orf195Q5TG92 126 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 C10orf105Q8TEF2 133 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 TMEM242Q9NWH2 141 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 EPDR1Q9UM22 224 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 IGLC2P0DOY2 106 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 IGLC3P0DOY3 106 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 ZNF491Q8N8L2 437 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 OR4F17Q8NGA8 305 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 PRO0628Q9UI54 55 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 FN1P02751 2386 aaKnown RBP8.42□□□□□ -1.06
NEDD9-201ENST00000379433 HIVEP2P31629 2446 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 TRBV20-1A0A075B6N2 111 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 ATP5LO75964 103 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 NDUFA3O95167 84 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 MINOS1Q5TGZ0 78 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 TMEM256Q8N2U0 113 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 NPBQ8NG41 125 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 MS4A6AQ9H2W1 248 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 SPANXA1Q9NS26 97 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 MINOS1-NBL1R4GNA1 71 aa8.42□□□□□ -1.06
NEDD9-201ENST00000379433 ADMP35318 185 aa8.41□□□□□ -1.06
NEDD9-201ENST00000379433 BPIFA4PQ86YQ2 179 aa8.41□□□□□ -1.06
NEDD9-201ENST00000379433 TMEM101Q96IK0 257 aa8.41□□□□□ -1.06
NEDD9-201ENST00000379433 EGR2P11161 476 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-201ENST00000379433 IGHV1-69DA0A0B4J2H0 117 aa8.41□□□□□ -1.06
NEDD9-201ENST00000379433 F2Z2F3 143 aa8.41□□□□□ -1.06
NEDD9-201ENST00000379433 INS-IGF2F8WCM5 200 aa8.41□□□□□ -1.06
NEDD9-201ENST00000379433 IGHV1-69P01742 117 aa8.41□□□□□ -1.06
NEDD9-201ENST00000379433 MSMBP08118 114 aa8.41□□□□□ -1.06
NEDD9-201ENST00000379433 FAM159AQ6UWV7 190 aa8.41□□□□□ -1.06
NEDD9-201ENST00000379433 LINC00322Q6ZN03 302 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-201ENST00000379433 Q8TAT8 98 aa8.41□□□□□ -1.06
NEDD9-201ENST00000379433 RNF5Q99942 180 aa8.41□□□□□ -1.06
NEDD9-201ENST00000379433 TXNDC17Q9BRA2 123 aa8.41□□□□□ -1.06
NEDD9-201ENST00000379433 GCN1Q92616 2671 aaKnown RBP8.4□□□□□ -1.06
NEDD9-201ENST00000379433 IGLV11-55A0A075B6I3 123 aa8.4□□□□□ -1.06
NEDD9-201ENST00000379433 GP9P14770 177 aa8.4□□□□□ -1.06
NEDD9-201ENST00000379433 TMEM97Q5BJF2 176 aa8.4□□□□□ -1.06
NEDD9-201ENST00000379433 RNF182Q8N6D2 247 aa8.4□□□□□ -1.06
NEDD9-201ENST00000379433 AJUBAQ96IF1 538 aa8.4□□□□□ -1.06
NEDD9-201ENST00000379433 NRN1Q9NPD7 142 aa8.4□□□□□ -1.06
NEDD9-201ENST00000379433 V9GYV3 84 aa8.4□□□□□ -1.06
NEDD9-201ENST00000379433 IGKV2-40A0A087WW87 121 aaPredicted RBP8.4□□□□□ -1.07
NEDD9-201ENST00000379433 FAM236DA0A1B0GTK5 79 aa8.4□□□□□ -1.07
NEDD9-201ENST00000379433 FSTL3O95633 263 aa8.4□□□□□ -1.07
NEDD9-201ENST00000379433 IGKV2D-40P01614 121 aaPredicted RBP8.4□□□□□ -1.07
NEDD9-201ENST00000379433 HLA-DRB1P01911 266 aa8.4□□□□□ -1.07
NEDD9-201ENST00000379433 FAM236CP0DP71 79 aa8.4□□□□□ -1.07
NEDD9-201ENST00000379433 BAGE3Q86Y29 109 aa8.4□□□□□ -1.07
NEDD9-201ENST00000379433 MRPL18Q9H0U6 180 aaKnown RBP8.4□□□□□ -1.07
NEDD9-201ENST00000379433 IL36BQ9NZH7 164 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms