RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 SLAQ13239 276 aa12□□□□□ -0.49
PDLIM4-202ENST00000379018 RAB31Q13636 194 aa12□□□□□ -0.49
PDLIM4-202ENST00000379018 EXOC3-AS1Q8N2X6 119 aa12□□□□□ -0.49
PDLIM4-202ENST00000379018 LINC00477Q96M19 166 aa12□□□□□ -0.49
PDLIM4-202ENST00000379018 GGACTQ9BVM4 153 aa12□□□□□ -0.49
PDLIM4-202ENST00000379018 IGHV1OR15-1A0A075B7D0 117 aa11.99□□□□□ -0.49
PDLIM4-202ENST00000379018 CST7O76096 145 aa11.99□□□□□ -0.49
PDLIM4-202ENST00000379018 PYYP10082 97 aa11.99□□□□□ -0.49
PDLIM4-202ENST00000379018 GYPEP15421 78 aa11.99□□□□□ -0.49
PDLIM4-202ENST00000379018 IBA57Q5T440 356 aaKnown RBP11.99□□□□□ -0.49
PDLIM4-202ENST00000379018 MRPL53Q96EL3 112 aaKnown RBP11.99□□□□□ -0.49
PDLIM4-202ENST00000379018 FAM19A4Q96LR4 140 aa11.99□□□□□ -0.49
PDLIM4-202ENST00000379018 PFDN5Q99471 154 aa11.99□□□□□ -0.49
PDLIM4-202ENST00000379018 LSM5Q9Y4Y9 91 aaKnown RBP11.99□□□□□ -0.49
PDLIM4-202ENST00000379018 UBE2L5PA0A1B0GUS4 154 aa11.98□□□□□ -0.49
PDLIM4-202ENST00000379018 CCSO14618 274 aa11.98□□□□□ -0.49
PDLIM4-202ENST00000379018 SSNA1O43805 119 aa11.98□□□□□ -0.49
PDLIM4-202ENST00000379018 ATP6V1G1O75348 118 aa11.98□□□□□ -0.49
PDLIM4-202ENST00000379018 MBPP02686 304 aaPredicted RBP11.98□□□□□ -0.49
PDLIM4-202ENST00000379018 CAV2P51636 162 aa11.98□□□□□ -0.49
PDLIM4-202ENST00000379018 NKX2-5P52952 324 aaPredicted RBP11.98□□□□□ -0.49
PDLIM4-202ENST00000379018 BAXQ07812 192 aa11.98□□□□□ -0.49
PDLIM4-202ENST00000379018 MUC21Q5SSG8 566 aa11.98□□□□□ -0.49
PDLIM4-202ENST00000379018 TMEM78Q5T7P6 136 aa11.98□□□□□ -0.49
PDLIM4-202ENST00000379018 FAM122CQ6P4D5 195 aa11.98□□□□□ -0.49
PDLIM4-202ENST00000379018 C9orf62Q8N4C0 152 aa11.98□□□□□ -0.49
PDLIM4-202ENST00000379018 ZNF253O75346 499 aa11.97□□□□□ -0.49
PDLIM4-202ENST00000379018 NDUFB4O95168 129 aa11.97□□□□□ -0.49
PDLIM4-202ENST00000379018 ZFAND2AQ8N6M9 145 aa11.97□□□□□ -0.49
PDLIM4-202ENST00000379018 ZNF479Q96JC4 524 aa11.97□□□□□ -0.49
PDLIM4-202ENST00000379018 TMEM70Q9BUB7 260 aa11.97□□□□□ -0.49
PDLIM4-202ENST00000379018 MRPL32Q9BYC8 188 aaKnown RBP11.97□□□□□ -0.49
PDLIM4-202ENST00000379018 SLC39A9Q9NUM3 307 aa11.97□□□□□ -0.49
PDLIM4-202ENST00000379018 FAM25EA8MYX2 175 aa11.96□□□□□ -0.49
PDLIM4-202ENST00000379018 G3V3Q6 166 aa11.96□□□□□ -0.49
PDLIM4-202ENST00000379018 HIST1H1EP10412 219 aaKnown RBP11.96□□□□□ -0.49
PDLIM4-202ENST00000379018 CRISP2P16562 243 aa11.96□□□□□ -0.49
PDLIM4-202ENST00000379018 C12orf45Q8N5I9 185 aaPredicted RBP11.96□□□□□ -0.49
PDLIM4-202ENST00000379018 Q8TAT8 98 aa11.96□□□□□ -0.49
PDLIM4-202ENST00000379018 AAMDCQ9H7C9 122 aa11.96□□□□□ -0.49
PDLIM4-202ENST00000379018 Q9HAA7 133 aa11.96□□□□□ -0.49
PDLIM4-202ENST00000379018 UQCC1Q9NVA1 299 aa11.96□□□□□ -0.49
PDLIM4-202ENST00000379018 PRELID1Q9Y255 219 aa11.96□□□□□ -0.49
PDLIM4-202ENST00000379018 FAM24AA6NFZ4 105 aa11.95□□□□□ -0.5
PDLIM4-202ENST00000379018 C10orf126Q8N4M7 172 aa11.95□□□□□ -0.5
PDLIM4-202ENST00000379018 FAM30AQ9NZY2 134 aa11.95□□□□□ -0.5
PDLIM4-202ENST00000379018 LOC100131303A0A0U1RQF7 123 aa11.94□□□□□ -0.5
PDLIM4-202ENST00000379018 HMSDA8MTL9 139 aa11.94□□□□□ -0.5
PDLIM4-202ENST00000379018 C9orf47Q6ZRZ4 202 aa11.94□□□□□ -0.5
PDLIM4-202ENST00000379018 TXNDC17Q9BRA2 123 aa11.94□□□□□ -0.5
PDLIM4-202ENST00000379018 WDR83OSQ9Y284 106 aa11.94□□□□□ -0.5
PDLIM4-202ENST00000379018 LRCOL1A6NCL2 159 aa11.93□□□□□ -0.5
PDLIM4-202ENST00000379018 K7EP13 123 aa11.93□□□□□ -0.5
PDLIM4-202ENST00000379018 FGF7P21781 194 aa11.93□□□□□ -0.5
PDLIM4-202ENST00000379018 Q5BKY6 102 aa11.93□□□□□ -0.5
PDLIM4-202ENST00000379018 GCSAMLQ5JQS6 135 aa11.93□□□□□ -0.5
PDLIM4-202ENST00000379018 NHLRC2Q8NBF2 726 aa11.93□□□□□ -0.5
PDLIM4-202ENST00000379018 NTN5Q8WTR8 489 aaPredicted RBP11.93□□□□□ -0.5
PDLIM4-202ENST00000379018 SEC22CQ9BRL7 303 aa11.93□□□□□ -0.5
PDLIM4-202ENST00000379018 SLC25A31Q9H0C2 315 aa11.93□□□□□ -0.5
PDLIM4-202ENST00000379018 TMEM14CQ9P0S9 112 aa11.93□□□□□ -0.5
PDLIM4-202ENST00000379018 ZNF492Q9P255 531 aa11.93□□□□□ -0.5
PDLIM4-202ENST00000379018 C9JCJ5 164 aa11.92□□□□□ -0.5
PDLIM4-202ENST00000379018 ORM1P02763 201 aa11.92□□□□□ -0.5
PDLIM4-202ENST00000379018 S100A1P23297 94 aa11.92□□□□□ -0.5
PDLIM4-202ENST00000379018 RPL29P47914 159 aaKnown RBP11.92□□□□□ -0.5
PDLIM4-202ENST00000379018 PPT1P50897 306 aa11.92□□□□□ -0.5
PDLIM4-202ENST00000379018 PDE6HQ13956 83 aa11.92□□□□□ -0.5
PDLIM4-202ENST00000379018 TMEM183BQ1AE95 376 aa11.92□□□□□ -0.5
PDLIM4-202ENST00000379018 TMEM183AQ8IXX5 376 aa11.92□□□□□ -0.5
PDLIM4-202ENST00000379018 OR2T35Q8NGX2 323 aa11.92□□□□□ -0.5
PDLIM4-202ENST00000379018 MITD1Q8WV92 249 aa11.92□□□□□ -0.5
PDLIM4-202ENST00000379018 NMBP08949 121 aa11.91□□□□□ -0.5
PDLIM4-202ENST00000379018 S100A10P60903 97 aa11.91□□□□□ -0.5
PDLIM4-202ENST00000379018 Q8N814 137 aa11.91□□□□□ -0.5
PDLIM4-202ENST00000379018 OR11H4Q8NGC9 324 aa11.91□□□□□ -0.5
PDLIM4-202ENST00000379018 SLC25A2Q9BXI2 301 aa11.91□□□□□ -0.5
PDLIM4-202ENST00000379018 NAGKQ9UJ70 344 aa11.91□□□□□ -0.5
PDLIM4-202ENST00000379018 IGHV3-16A0A0C4DH30 117 aa11.9□□□□□ -0.5
PDLIM4-202ENST00000379018 IGHV3-38A0A0C4DH36 116 aa11.9□□□□□ -0.5
PDLIM4-202ENST00000379018 C5orf51A6NDU8 294 aa11.9□□□□□ -0.5
PDLIM4-202ENST00000379018 PLA2G1BP04054 148 aaKnown RBP11.9□□□□□ -0.5
PDLIM4-202ENST00000379018 ZNF138P52744 262 aa11.9□□□□□ -0.5
PDLIM4-202ENST00000379018 LINC00528Q8N1L1 170 aa11.9□□□□□ -0.5
PDLIM4-202ENST00000379018 OR10G4Q8NGN3 311 aa11.9□□□□□ -0.5
PDLIM4-202ENST00000379018 HSPB11Q9Y547 144 aa11.9□□□□□ -0.5
PDLIM4-202ENST00000379018 IGHV3-30P01768 117 aa11.89□□□□□ -0.51
PDLIM4-202ENST00000379018 IGHV3-33P01772 117 aa11.89□□□□□ -0.51
PDLIM4-202ENST00000379018 OR10J4P0C629 311 aa11.89□□□□□ -0.51
PDLIM4-202ENST00000379018 IGHV3-30-3P0DP02 117 aa11.89□□□□□ -0.51
PDLIM4-202ENST00000379018 IGHV3-30-5P0DP03 117 aa11.89□□□□□ -0.51
PDLIM4-202ENST00000379018 MIR17HGQ75NE6 70 aa11.89□□□□□ -0.51
PDLIM4-202ENST00000379018 OR4C5Q8NGB2 326 aa11.89□□□□□ -0.51
PDLIM4-202ENST00000379018 IGSF23A1L1A6 192 aa11.88□□□□□ -0.51
PDLIM4-202ENST00000379018 H2BFSP57053 126 aa11.88□□□□□ -0.51
PDLIM4-202ENST00000379018 IQCF2Q8IXL9 164 aa11.88□□□□□ -0.51
PDLIM4-202ENST00000379018 TRGV11A0A075B6L2 103 aa11.87□□□□□ -0.51
PDLIM4-202ENST00000379018 TRAV4A0A0B4J268 109 aa11.87□□□□□ -0.51
PDLIM4-202ENST00000379018 NBEAP1P0C6P0 100 aa11.87□□□□□ -0.51
PDLIM4-202ENST00000379018 PVALBP20472 110 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms