RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 ZNF727A8MUV8 499 aa10.18□□□□□ -0.78
UPK1A-202ENST00000379013 CA1P00915 261 aaPredicted RBP10.18□□□□□ -0.78
UPK1A-202ENST00000379013 DEFB1P60022 68 aa10.18□□□□□ -0.78
UPK1A-202ENST00000379013 ZNF674Q2M3X9 581 aa10.18□□□□□ -0.78
UPK1A-202ENST00000379013 BAGE2Q86Y30 109 aa10.18□□□□□ -0.78
UPK1A-202ENST00000379013 TMEM183AQ8IXX5 376 aa10.18□□□□□ -0.78
UPK1A-202ENST00000379013 Q8TAT8 98 aa10.18□□□□□ -0.78
UPK1A-202ENST00000379013 CITED4Q96RK1 184 aa10.18□□□□□ -0.78
UPK1A-202ENST00000379013 NIPSNAP3BQ9BS92 247 aa10.18□□□□□ -0.78
UPK1A-202ENST00000379013 LY96Q9Y6Y9 160 aa10.18□□□□□ -0.78
UPK1A-202ENST00000379013 TRAV34A0A0B4J273 112 aa10.17□□□□□ -0.78
UPK1A-202ENST00000379013 IGLV2-11P01706 119 aa10.17□□□□□ -0.78
UPK1A-202ENST00000379013 SPINK13Q1W4C9 94 aa10.17□□□□□ -0.78
UPK1A-202ENST00000379013 CENPWQ5EE01 88 aa10.17□□□□□ -0.78
UPK1A-202ENST00000379013 AMTNQ6UX39 209 aa10.17□□□□□ -0.78
UPK1A-202ENST00000379013 Q6ZWC4 215 aa10.17□□□□□ -0.78
UPK1A-202ENST00000379013 FAM19A4Q96LR4 140 aa10.17□□□□□ -0.78
UPK1A-202ENST00000379013 IGF2BP2-AS1Q96M15 143 aa10.17□□□□□ -0.78
UPK1A-202ENST00000379013 GOLT1BQ9Y3E0 138 aa10.17□□□□□ -0.78
UPK1A-202ENST00000379013 TRAV21A0A0B4J279 112 aa10.16□□□□□ -0.78
UPK1A-202ENST00000379013 C7orf71A4D174 169 aa10.16□□□□□ -0.78
UPK1A-202ENST00000379013 RBMY1BA6NDE4 496 aaKnown RBP10.16□□□□□ -0.78
UPK1A-202ENST00000379013 RBMY1EA6NEQ0 496 aaKnown RBP10.16□□□□□ -0.78
UPK1A-202ENST00000379013 KLLNB2CW77 178 aa10.16□□□□□ -0.78
UPK1A-202ENST00000379013 SFTA3P0C7M3 94 aa10.16□□□□□ -0.78
UPK1A-202ENST00000379013 RBMY1DP0C7P1 496 aaKnown RBP10.16□□□□□ -0.78
UPK1A-202ENST00000379013 COX8CQ7Z4L0 72 aa10.16□□□□□ -0.78
UPK1A-202ENST00000379013 LINC00479Q96M42 142 aa10.16□□□□□ -0.78
UPK1A-202ENST00000379013 TMEM208Q9BTX3 173 aa10.16□□□□□ -0.78
UPK1A-202ENST00000379013 M0R2Z0 102 aa10.15□□□□□ -0.78
UPK1A-202ENST00000379013 FAM162BQ5T6X4 162 aa10.15□□□□□ -0.78
UPK1A-202ENST00000379013 LINC00322Q6ZN03 302 aaPredicted RBP10.15□□□□□ -0.78
UPK1A-202ENST00000379013 DAZAP1Q96EP5 407 aaKnown RBP10.15□□□□□ -0.78
UPK1A-202ENST00000379013 SGK494Q96LW2 274 aa10.15□□□□□ -0.78
UPK1A-202ENST00000379013 DERL1Q9BUN8 251 aa10.15□□□□□ -0.78
UPK1A-202ENST00000379013 XCL2Q9UBD3 114 aa10.15□□□□□ -0.78
UPK1A-202ENST00000379013 NAT8Q9UHE5 227 aa10.15□□□□□ -0.78
UPK1A-202ENST00000379013 H7BYZ3 331 aa10.14□□□□□ -0.79
UPK1A-202ENST00000379013 GCGP01275 180 aa10.14□□□□□ -0.79
UPK1A-202ENST00000379013 PFN1P07737 140 aaKnown RBP10.14□□□□□ -0.79
UPK1A-202ENST00000379013 MGST1P10620 155 aaKnown RBP10.14□□□□□ -0.79
UPK1A-202ENST00000379013 PNRC1Q12796 327 aaPredicted RBP10.14□□□□□ -0.79
UPK1A-202ENST00000379013 TMEM241Q24JQ0 296 aa10.14□□□□□ -0.79
UPK1A-202ENST00000379013 Q6AWC8 147 aa10.14□□□□□ -0.79
UPK1A-202ENST00000379013 ZFAND2AQ8N6M9 145 aa10.14□□□□□ -0.79
UPK1A-202ENST00000379013 RCHY1Q96PM5 261 aa10.14□□□□□ -0.79
UPK1A-202ENST00000379013 TP53TG1Q9Y2A0 90 aa10.14□□□□□ -0.79
UPK1A-202ENST00000379013 FABP5P3A8MUU1 101 aa10.13□□□□□ -0.79
UPK1A-202ENST00000379013 RNASE4P34096 147 aaKnown RBP10.13□□□□□ -0.79
UPK1A-202ENST00000379013 SRSF3P84103 164 aaKnown RBP10.13□□□□□ -0.79
UPK1A-202ENST00000379013 GFI1BQ5VTD9 330 aa10.13□□□□□ -0.79
UPK1A-202ENST00000379013 KCNS1Q96KK3 526 aa10.13□□□□□ -0.79
UPK1A-202ENST00000379013 PYGO2Q9BRQ0 406 aa10.13□□□□□ -0.79
UPK1A-202ENST00000379013 TRAV12-2A0A075B6T6 113 aa10.12□□□□□ -0.79
UPK1A-202ENST00000379013 TMEM218A2RU14 115 aa10.12□□□□□ -0.79
UPK1A-202ENST00000379013 KRBOX1C9JBD0 128 aa10.12□□□□□ -0.79
UPK1A-202ENST00000379013 F8W036 122 aa10.12□□□□□ -0.79
UPK1A-202ENST00000379013 J3KRW8 73 aa10.12□□□□□ -0.79
UPK1A-202ENST00000379013 PRB4P10163 310 aaPredicted RBP10.12□□□□□ -0.79
UPK1A-202ENST00000379013 FXYD7P58549 80 aa10.12□□□□□ -0.79
UPK1A-202ENST00000379013 FAM159AQ6UWV7 190 aa10.12□□□□□ -0.79
UPK1A-202ENST00000379013 SPATA25Q9BR10 227 aa10.12□□□□□ -0.79
UPK1A-202ENST00000379013 TM2D3Q9BRN9 247 aa10.12□□□□□ -0.79
UPK1A-202ENST00000379013 MLST8Q9BVC4 326 aa10.12□□□□□ -0.79
UPK1A-202ENST00000379013 SEC11CQ9BY50 192 aa10.12□□□□□ -0.79
UPK1A-202ENST00000379013 ZMAT4Q9H898 229 aa10.12□□□□□ -0.79
UPK1A-202ENST00000379013 TRAV12-3A0A0B4J271 114 aa10.11□□□□□ -0.79
UPK1A-202ENST00000379013 XKRY2A2RUG3 117 aa10.11□□□□□ -0.79
UPK1A-202ENST00000379013 SMIM9A6NGZ8 99 aa10.11□□□□□ -0.79
UPK1A-202ENST00000379013 BTN1A1Q13410 526 aa10.11□□□□□ -0.79
UPK1A-202ENST00000379013 C8orf49Q96NF6 230 aa10.11□□□□□ -0.79
UPK1A-202ENST00000379013 HYDINQ4G0P3 5121 aa10.11□□□□□ -0.79
UPK1A-202ENST00000379013 TRBV20OR9-2A0A075B6H5 130 aa10.1□□□□□ -0.79
UPK1A-202ENST00000379013 C9JQL5 133 aa10.1□□□□□ -0.79
UPK1A-202ENST00000379013 CRXO43186 299 aaPredicted RBP10.1□□□□□ -0.79
UPK1A-202ENST00000379013 SPRY2O43597 315 aa10.1□□□□□ -0.79
UPK1A-202ENST00000379013 DEFB135Q30KP9 77 aa10.1□□□□□ -0.79
UPK1A-202ENST00000379013 PRR27Q6MZM9 219 aa10.1□□□□□ -0.79
UPK1A-202ENST00000379013 LINC01551Q86U37 167 aa10.1□□□□□ -0.79
UPK1A-202ENST00000379013 C15orf54Q8N8G6 183 aa10.1□□□□□ -0.79
UPK1A-202ENST00000379013 NHLRC2Q8NBF2 726 aa10.1□□□□□ -0.79
UPK1A-202ENST00000379013 TVP23CQ96ET8 276 aa10.1□□□□□ -0.79
UPK1A-202ENST00000379013 ZC2HC1AQ96GY0 325 aa10.1□□□□□ -0.79
UPK1A-202ENST00000379013 LINC01587Q99440 93 aa10.1□□□□□ -0.79
UPK1A-202ENST00000379013 LINC00467Q9BRT7 94 aa10.1□□□□□ -0.79
UPK1A-202ENST00000379013 TRGV11A0A075B6L2 103 aa10.09□□□□□ -0.79
UPK1A-202ENST00000379013 P01737 135 aa10.09□□□□□ -0.79
UPK1A-202ENST00000379013 RPS20P60866 119 aaKnown RBP10.09□□□□□ -0.79
UPK1A-202ENST00000379013 ADIRFQ15847 76 aa10.09□□□□□ -0.79
UPK1A-202ENST00000379013 ZNF705AQ6ZN79 300 aaPredicted RBP10.09□□□□□ -0.79
UPK1A-202ENST00000379013 OCC1Q8TAD7 63 aa10.09□□□□□ -0.79
UPK1A-202ENST00000379013 RNF183Q96D59 192 aa10.09□□□□□ -0.79
UPK1A-202ENST00000379013 NEU1Q99519 415 aa10.09□□□□□ -0.79
UPK1A-202ENST00000379013 SDF2L1Q9HCN8 221 aa10.09□□□□□ -0.79
UPK1A-202ENST00000379013 IGHV3OR16-12A0A075B7B8 117 aa10.08□□□□□ -0.8
UPK1A-202ENST00000379013 IGHV1OR15-1A0A075B7D0 117 aa10.08□□□□□ -0.8
UPK1A-202ENST00000379013 TMEM189A5PLL7 270 aa10.08□□□□□ -0.8
UPK1A-202ENST00000379013 B4DEV8 164 aa10.08□□□□□ -0.8
UPK1A-202ENST00000379013 SH2D1AO60880 128 aa10.08□□□□□ -0.8
UPK1A-202ENST00000379013 ZNF324O75467 553 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms