RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 OR13C6PQ8NH95 151 aa6.89□□□□□ -1.31
PCDH9-202ENST00000377865 DAZ1Q9NQZ3 744 aaKnown RBP6.89□□□□□ -1.31
PCDH9-202ENST00000377865 IGKV1-17P01599 117 aa6.88□□□□□ -1.31
PCDH9-202ENST00000377865 DAZAP2Q15038 168 aaPredicted RBP6.88□□□□□ -1.31
PCDH9-202ENST00000377865 C7orf69Q9H7B7 122 aa6.88□□□□□ -1.31
PCDH9-202ENST00000377865 C1orf122Q6ZSJ8 110 aa6.88□□□□□ -1.31
PCDH9-202ENST00000377865 LCNL1Q6ZST4 164 aa6.88□□□□□ -1.31
PCDH9-202ENST00000377865 RHPN1-AS1Q9BWJ2 59 aa6.88□□□□□ -1.31
PCDH9-202ENST00000377865 IGLV11-55A0A075B6I3 123 aa6.88□□□□□ -1.31
PCDH9-202ENST00000377865 PROP1O75360 226 aa6.88□□□□□ -1.31
PCDH9-202ENST00000377865 PLA2G5P39877 138 aa6.88□□□□□ -1.31
PCDH9-202ENST00000377865 DKK4Q9UBT3 224 aa6.88□□□□□ -1.31
PCDH9-202ENST00000377865 ANXA2RQ3ZCQ2 193 aa6.88□□□□□ -1.31
PCDH9-202ENST00000377865 SLC25A20O43772 301 aa6.87□□□□□ -1.31
PCDH9-202ENST00000377865 MYO7BQ6PIF6 2116 aa6.87□□□□□ -1.31
PCDH9-202ENST00000377865 IFITM1P13164 125 aa6.87□□□□□ -1.31
PCDH9-202ENST00000377865 FXYD2P54710 66 aa6.87□□□□□ -1.31
PCDH9-202ENST00000377865 SAA4P35542 130 aa6.87□□□□□ -1.31
PCDH9-202ENST00000377865 TCF15Q12870 199 aa6.87□□□□□ -1.31
PCDH9-202ENST00000377865 RHOHQ15669 191 aa6.87□□□□□ -1.31
PCDH9-202ENST00000377865 RITA1Q96K30 269 aa6.87□□□□□ -1.31
PCDH9-202ENST00000377865 SHANK1Q9Y566 2161 aa6.87□□□□□ -1.31
PCDH9-202ENST00000377865 A0A087WWL8 130 aa6.87□□□□□ -1.31
PCDH9-202ENST00000377865 LEPROTO15243 131 aa6.87□□□□□ -1.31
PCDH9-202ENST00000377865 FCN3O75636 299 aa6.87□□□□□ -1.31
PCDH9-202ENST00000377865 ODF1Q14990 250 aa6.87□□□□□ -1.31
PCDH9-202ENST00000377865 Q8N7P7 452 aa6.87□□□□□ -1.31
PCDH9-202ENST00000377865 CHD3Q12873 2000 aaKnown RBP6.87□□□□□ -1.31
PCDH9-202ENST00000377865 H3BUA1 57 aa6.87□□□□□ -1.31
PCDH9-202ENST00000377865 SRD5A1P18405 259 aa6.87□□□□□ -1.31
PCDH9-202ENST00000377865 MYCNOSP40205 109 aa6.87□□□□□ -1.31
PCDH9-202ENST00000377865 YLPM1P49750 1951 aaKnown RBP6.87□□□□□ -1.31
PCDH9-202ENST00000377865 PRSS29PA6NIE9 313 aa6.86□□□□□ -1.31
PCDH9-202ENST00000377865 J3QQQ9 107 aa6.86□□□□□ -1.31
PCDH9-202ENST00000377865 LGALS1P09382 135 aaKnown RBP6.86□□□□□ -1.31
PCDH9-202ENST00000377865 TMEM219Q86XT9 240 aa6.86□□□□□ -1.31
PCDH9-202ENST00000377865 ITLN2Q8WWU7 325 aaPredicted RBP6.86□□□□□ -1.31
PCDH9-202ENST00000377865 MRPL36Q9P0J6 103 aaKnown RBP6.86□□□□□ -1.31
PCDH9-202ENST00000377865 PCNX3Q9H6A9 2034 aa6.86□□□□□ -1.31
PCDH9-202ENST00000377865 SDHAF1A6NFY7 115 aa6.86□□□□□ -1.31
PCDH9-202ENST00000377865 MED14OSP0DP75 135 aa6.86□□□□□ -1.31
PCDH9-202ENST00000377865 FGF6P10767 208 aa6.86□□□□□ -1.31
PCDH9-202ENST00000377865 Q8N976 141 aa6.86□□□□□ -1.31
PCDH9-202ENST00000377865 TOMM6Q96B49 74 aa6.86□□□□□ -1.31
PCDH9-202ENST00000377865 AGPAT4-IT1Q9H0P7 198 aa6.86□□□□□ -1.31
PCDH9-202ENST00000377865 U3KQK5 164 aa6.86□□□□□ -1.31
PCDH9-202ENST00000377865 AMTNQ6UX39 209 aa6.86□□□□□ -1.31
PCDH9-202ENST00000377865 E7EUB6 86 aa6.85□□□□□ -1.31
PCDH9-202ENST00000377865 CRPP02741 224 aa6.85□□□□□ -1.31
PCDH9-202ENST00000377865 PRSS33Q8NF86 280 aa6.85□□□□□ -1.31
PCDH9-202ENST00000377865 CACNA1DQ01668 2161 aa6.85□□□□□ -1.31
PCDH9-202ENST00000377865 LINC00310P59036 64 aa6.85□□□□□ -1.31
PCDH9-202ENST00000377865 ADARB2-AS1A8MUL3 147 aa6.85□□□□□ -1.31
PCDH9-202ENST00000377865 UTF1Q5T230 341 aa6.85□□□□□ -1.31
PCDH9-202ENST00000377865 LINC00322Q6ZN03 302 aaPredicted RBP6.85□□□□□ -1.31
PCDH9-202ENST00000377865 SPXQ9BT56 116 aa6.85□□□□□ -1.31
PCDH9-202ENST00000377865 SPANXCQ9NY87 97 aa6.85□□□□□ -1.31
PCDH9-202ENST00000377865 LINC00527Q9UJ94 153 aa6.85□□□□□ -1.31
PCDH9-202ENST00000377865 NCOA6Q14686 2063 aaPredicted RBP6.85□□□□□ -1.31
PCDH9-202ENST00000377865 GHRHP01286 108 aa6.85□□□□□ -1.31
PCDH9-202ENST00000377865 DSCR9P59020 149 aa6.85□□□□□ -1.31
PCDH9-202ENST00000377865 S100A7L2Q5SY68 101 aa6.85□□□□□ -1.31
PCDH9-202ENST00000377865 PIFOQ8TCI5 191 aa6.85□□□□□ -1.31
PCDH9-202ENST00000377865 RNF114Q9Y508 228 aa6.85□□□□□ -1.31
PCDH9-202ENST00000377865 IGF2-ASQ6U949 168 aa6.84□□□□□ -1.31
PCDH9-202ENST00000377865 TRAV8-3A0A0A6YYJ7 113 aa6.84□□□□□ -1.31
PCDH9-202ENST00000377865 IGKV3D-20A0A0C4DH25 116 aa6.84□□□□□ -1.31
PCDH9-202ENST00000377865 RHODO00212 210 aa6.84□□□□□ -1.31
PCDH9-202ENST00000377865 COX6B1P14854 86 aa6.84□□□□□ -1.31
PCDH9-202ENST00000377865 HOXB4P17483 251 aaPredicted RBP6.84□□□□□ -1.31
PCDH9-202ENST00000377865 COL4A2P08572 1712 aa6.84□□□□□ -1.31
PCDH9-202ENST00000377865 E9PLD3 99 aa6.84□□□□□ -1.31
PCDH9-202ENST00000377865 CFC1BP0CG36 223 aa6.84□□□□□ -1.31
PCDH9-202ENST00000377865 CFC1P0CG37 223 aa6.84□□□□□ -1.31
PCDH9-202ENST00000377865 INAFM2P0DMQ5 153 aa6.84□□□□□ -1.31
PCDH9-202ENST00000377865 NPC2P61916 151 aa6.84□□□□□ -1.31
PCDH9-202ENST00000377865 STHQ8IWL8 128 aa6.84□□□□□ -1.31
PCDH9-202ENST00000377865 WFDC12Q8WWY7 111 aa6.84□□□□□ -1.31
PCDH9-202ENST00000377865 KNTC1P50748 2209 aa6.84□□□□□ -1.31
PCDH9-202ENST00000377865 IGHV1OR15-1A0A075B7D0 117 aa6.84□□□□□ -1.31
PCDH9-202ENST00000377865 C9orf47Q6ZRZ4 202 aa6.84□□□□□ -1.31
PCDH9-202ENST00000377865 C1orf229Q6ZS94 237 aaPredicted RBP6.84□□□□□ -1.31
PCDH9-202ENST00000377865 IGHG4P01861 327 aa6.83□□□□□ -1.32
PCDH9-202ENST00000377865 GATA1P15976 413 aaPredicted RBP6.83□□□□□ -1.32
PCDH9-202ENST00000377865 CMC4P56277 68 aaPredicted RBP6.83□□□□□ -1.32
PCDH9-202ENST00000377865 PI4KAP42356 2102 aa6.83□□□□□ -1.32
PCDH9-202ENST00000377865 IGKV3OR2-268A0A0C4DH90 116 aa6.83□□□□□ -1.32
PCDH9-202ENST00000377865 PRSS47A8MTI9 375 aa6.83□□□□□ -1.32
PCDH9-202ENST00000377865 IGLV1-47P01700 117 aa6.83□□□□□ -1.32
PCDH9-202ENST00000377865 FOXI1Q12951 378 aa6.83□□□□□ -1.32
PCDH9-202ENST00000377865 SH2D6Q7Z4S9 175 aa6.83□□□□□ -1.32
PCDH9-202ENST00000377865 TEN1Q86WV5 123 aa6.83□□□□□ -1.32
PCDH9-202ENST00000377865 TOMM7Q9P0U1 55 aa6.83□□□□□ -1.32
PCDH9-202ENST00000377865 CRYBA4P53673 196 aa6.83□□□□□ -1.32
PCDH9-202ENST00000377865 FOXE3Q13461 319 aa6.83□□□□□ -1.32
PCDH9-202ENST00000377865 GATD1Q8NB37 220 aa6.83□□□□□ -1.32
PCDH9-202ENST00000377865 RPL36AP83881 106 aaKnown RBP6.83□□□□□ -1.32
PCDH9-202ENST00000377865 RPL36ALQ969Q0 106 aaKnown RBP6.83□□□□□ -1.32
PCDH9-202ENST00000377865 WFDC2Q14508 124 aa6.83□□□□□ -1.32
PCDH9-202ENST00000377865 IGHV7-4-1A0A0J9YVY3 117 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms