RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 PSG8Q9UQ74 426 aa11.77□□□□□ -0.52
CCHCR1-201ENST00000376266 MALRD1Q5VYJ5 2156 aa11.77□□□□□ -0.52
CCHCR1-201ENST00000376266 CRYGCP07315 174 aa11.77□□□□□ -0.53
CCHCR1-201ENST00000376266 HOXB4P17483 251 aaPredicted RBP11.77□□□□□ -0.53
CCHCR1-201ENST00000376266 PAX8Q06710 450 aa11.77□□□□□ -0.53
CCHCR1-201ENST00000376266 WFDC11Q8NEX6 87 aa11.77□□□□□ -0.53
CCHCR1-201ENST00000376266 MRAP2Q96G30 205 aa11.77□□□□□ -0.53
CCHCR1-201ENST00000376266 TRBV25-1A0A075B6N4 114 aa11.76□□□□□ -0.53
CCHCR1-201ENST00000376266 TRBV6-1A0A0K0K1D8 114 aa11.76□□□□□ -0.53
CCHCR1-201ENST00000376266 SMKR1H3BMG3 65 aa11.76□□□□□ -0.53
CCHCR1-201ENST00000376266 APELAP0DMC3 54 aa11.76□□□□□ -0.53
CCHCR1-201ENST00000376266 CKS2P33552 79 aa11.76□□□□□ -0.53
CCHCR1-201ENST00000376266 CRIP1P50238 77 aa11.76□□□□□ -0.53
CCHCR1-201ENST00000376266 LMO4P61968 165 aa11.76□□□□□ -0.53
CCHCR1-201ENST00000376266 ATP5G2Q06055 141 aa11.76□□□□□ -0.53
CCHCR1-201ENST00000376266 PIFOQ8TCI5 191 aa11.76□□□□□ -0.53
CCHCR1-201ENST00000376266 WI2-2373I1.2A0A1W2PRP0 233 aa11.76□□□□□ -0.53
CCHCR1-201ENST00000376266 TMEM75Q8N9X5 138 aa11.76□□□□□ -0.53
CCHCR1-201ENST00000376266 FOXC2Q99958 501 aa11.76□□□□□ -0.53
CCHCR1-201ENST00000376266 LINC00574Q9H8X3 128 aa11.76□□□□□ -0.53
CCHCR1-201ENST00000376266 MYO9AB2RTY4 2548 aa11.76□□□□□ -0.53
CCHCR1-201ENST00000376266 NPYP01303 97 aa11.75□□□□□ -0.53
CCHCR1-201ENST00000376266 SLC25A16P16260 332 aa11.75□□□□□ -0.53
CCHCR1-201ENST00000376266 TMEM30BQ3MIR4 351 aa11.75□□□□□ -0.53
CCHCR1-201ENST00000376266 GAGE13Q4V321 117 aa11.75□□□□□ -0.53
CCHCR1-201ENST00000376266 PSMG4Q5JS54 123 aa11.75□□□□□ -0.53
CCHCR1-201ENST00000376266 MTURNQ8N3F0 131 aa11.75□□□□□ -0.53
CCHCR1-201ENST00000376266 MAPK1IP1LQ8NDC0 245 aa11.75□□□□□ -0.53
CCHCR1-201ENST00000376266 TM2D2Q9BX73 214 aa11.75□□□□□ -0.53
CCHCR1-201ENST00000376266 GEMIN7Q9H840 131 aaKnown RBP11.75□□□□□ -0.53
CCHCR1-201ENST00000376266 RNF223E7ERA6 249 aa11.75□□□□□ -0.53
CCHCR1-201ENST00000376266 PRSS1P07477 247 aa11.75□□□□□ -0.53
CCHCR1-201ENST00000376266 AMTNQ6UX39 209 aa11.75□□□□□ -0.53
CCHCR1-201ENST00000376266 SLC25A39Q9BZJ4 359 aaPredicted RBP11.75□□□□□ -0.53
CCHCR1-201ENST00000376266 HHLA3Q9XRX5 114 aa11.75□□□□□ -0.53
CCHCR1-201ENST00000376266 ARHGAP32A7KAX9 2087 aa11.75□□□□□ -0.53
CCHCR1-201ENST00000376266 ITPR3Q14573 2671 aa11.75□□□□□ -0.53
CCHCR1-201ENST00000376266 GTSCR1Q86UQ5 136 aa11.74□□□□□ -0.53
CCHCR1-201ENST00000376266 TPSG1Q9NRR2 321 aa11.74□□□□□ -0.53
CCHCR1-201ENST00000376266 TMEM14CQ9P0S9 112 aa11.74□□□□□ -0.53
CCHCR1-201ENST00000376266 INSL3P51460 131 aa11.74□□□□□ -0.53
CCHCR1-201ENST00000376266 ZNF562Q6V9R5 426 aa11.74□□□□□ -0.53
CCHCR1-201ENST00000376266 A0A096LNT2 108 aa11.73□□□□□ -0.53
CCHCR1-201ENST00000376266 IGLV2-23P01705 113 aa11.73□□□□□ -0.53
CCHCR1-201ENST00000376266 ZFP36P26651 326 aaKnown RBP11.73□□□□□ -0.53
CCHCR1-201ENST00000376266 DIAPH2-AS1Q14236 149 aa11.73□□□□□ -0.53
CCHCR1-201ENST00000376266 ODF1Q14990 250 aa11.73□□□□□ -0.53
CCHCR1-201ENST00000376266 VMA21Q3ZAQ7 101 aa11.73□□□□□ -0.53
CCHCR1-201ENST00000376266 C17orf77Q96MU5 243 aa11.73□□□□□ -0.53
CCHCR1-201ENST00000376266 C8orf49Q96NF6 230 aa11.73□□□□□ -0.53
CCHCR1-201ENST00000376266 CELSR1Q9NYQ6 3014 aa11.73□□□□□ -0.53
CCHCR1-201ENST00000376266 ZANQ9Y493 2812 aa11.73□□□□□ -0.53
CCHCR1-201ENST00000376266 IGKCP01834 107 aa11.73□□□□□ -0.53
CCHCR1-201ENST00000376266 ZNF502Q8TBZ5 544 aa11.73□□□□□ -0.53
CCHCR1-201ENST00000376266 ZNF48Q96MX3 618 aaPredicted RBP11.73□□□□□ -0.53
CCHCR1-201ENST00000376266 ABCA2Q9BZC7 2435 aa11.72□□□□□ -0.53
CCHCR1-201ENST00000376266 OTOGQ6ZRI0 2925 aa11.72□□□□□ -0.53
CCHCR1-201ENST00000376266 NPIPB5A8MRT5 1133 aa11.72□□□□□ -0.53
CCHCR1-201ENST00000376266 LEPP41159 167 aa11.72□□□□□ -0.53
CCHCR1-201ENST00000376266 C12orf74Q32Q52 190 aa11.72□□□□□ -0.53
CCHCR1-201ENST00000376266 ZMAT4Q9H898 229 aa11.72□□□□□ -0.53
CCHCR1-201ENST00000376266 MRPL16Q9NX20 251 aaKnown RBP11.72□□□□□ -0.53
CCHCR1-201ENST00000376266 TEX15Q9BXT5 2789 aa11.72□□□□□ -0.53
CCHCR1-201ENST00000376266 AGRNO00468 2067 aa11.72□□□□□ -0.53
CCHCR1-201ENST00000376266 CREBBPQ92793 2442 aa11.72□□□□□ -0.53
CCHCR1-201ENST00000376266 TRBV19A0A075B6N1 114 aa11.72□□□□□ -0.53
CCHCR1-201ENST00000376266 MC5RP33032 325 aa11.72□□□□□ -0.53
CCHCR1-201ENST00000376266 TWIST1Q15672 202 aa11.72□□□□□ -0.53
CCHCR1-201ENST00000376266 A0A1B0GWB2 263 aa11.71□□□□□ -0.53
CCHCR1-201ENST00000376266 ENSAO43768 121 aaKnown RBP11.71□□□□□ -0.53
CCHCR1-201ENST00000376266 ZC2HC1BQ5TFG8 222 aa11.71□□□□□ -0.53
CCHCR1-201ENST00000376266 TMEM200BQ69YZ2 307 aa11.71□□□□□ -0.53
CCHCR1-201ENST00000376266 RITA1Q96K30 269 aa11.71□□□□□ -0.53
CCHCR1-201ENST00000376266 LINC00312Q9Y6C7 94 aa11.71□□□□□ -0.53
CCHCR1-201ENST00000376266 CCL3L1P16619 93 aa11.71□□□□□ -0.54
CCHCR1-201ENST00000376266 EVI2AP22794 236 aa11.71□□□□□ -0.54
CCHCR1-201ENST00000376266 KLF17Q5JT82 389 aaPredicted RBP11.71□□□□□ -0.54
CCHCR1-201ENST00000376266 C20orf78Q9BR46 151 aa11.71□□□□□ -0.54
CCHCR1-201ENST00000376266 TMEM133Q9H2Q1 129 aa11.71□□□□□ -0.54
CCHCR1-201ENST00000376266 MAP1LC3AQ9H492 121 aa11.71□□□□□ -0.54
CCHCR1-201ENST00000376266 FLNAP21333 2647 aaKnown RBP11.7□□□□□ -0.54
CCHCR1-201ENST00000376266 RBP4P02753 201 aa11.7□□□□□ -0.54
CCHCR1-201ENST00000376266 FCER1GP30273 86 aa11.7□□□□□ -0.54
CCHCR1-201ENST00000376266 DPM2O94777 84 aa11.7□□□□□ -0.54
CCHCR1-201ENST00000376266 APOMO95445 188 aa11.7□□□□□ -0.54
CCHCR1-201ENST00000376266 WNK2Q9Y3S1 2297 aa11.69□□□□□ -0.54
CCHCR1-201ENST00000376266 CYSRT1A8MQ03 144 aa11.69□□□□□ -0.54
CCHCR1-201ENST00000376266 M0R3E3 92 aa11.69□□□□□ -0.54
CCHCR1-201ENST00000376266 RPL27AP46776 148 aaKnown RBP11.69□□□□□ -0.54
CCHCR1-201ENST00000376266 SIGLEC15Q6ZMC9 328 aa11.69□□□□□ -0.54
CCHCR1-201ENST00000376266 PRO0461Q9UI25 63 aa11.69□□□□□ -0.54
CCHCR1-201ENST00000376266 SH2D1AO60880 128 aa11.69□□□□□ -0.54
CCHCR1-201ENST00000376266 TTC9CQ8N5M4 171 aa11.69□□□□□ -0.54
CCHCR1-201ENST00000376266 HIST1H4GQ99525 98 aa11.69□□□□□ -0.54
CCHCR1-201ENST00000376266 RASL11BQ9BPW5 248 aa11.69□□□□□ -0.54
CCHCR1-201ENST00000376266 TMEM160Q9NX00 188 aa11.69□□□□□ -0.54
CCHCR1-201ENST00000376266 CR1P17927 2039 aa11.68□□□□□ -0.54
CCHCR1-201ENST00000376266 RRN3P1Q2M238 152 aa11.68□□□□□ -0.54
CCHCR1-201ENST00000376266 PVRIGQ6DKI7 326 aa11.68□□□□□ -0.54
CCHCR1-201ENST00000376266 IGHV3-72A0A0B4J1Y9 119 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms