RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 LINC01551Q86U37 167 aa16.83■□□□□ 0.28
HLA-C-202ENST00000376237 KIR2DL5AQ8N109 375 aa16.83■□□□□ 0.28
HLA-C-202ENST00000376237 NHLRC2Q8NBF2 726 aa16.83■□□□□ 0.28
HLA-C-202ENST00000376237 KIR2DL5BQ8NHK3 375 aa16.83■□□□□ 0.28
HLA-C-202ENST00000376237 PGPEP1LA6NFU8 196 aa16.82■□□□□ 0.28
HLA-C-202ENST00000376237 M0R2Z0 102 aa16.82■□□□□ 0.28
HLA-C-202ENST00000376237 MGST1P10620 155 aaKnown RBP16.82■□□□□ 0.28
HLA-C-202ENST00000376237 CSTL1Q9H114 145 aa16.82■□□□□ 0.28
HLA-C-202ENST00000376237 AURKAIP1Q9NWT8 199 aaPredicted RBP16.82■□□□□ 0.28
HLA-C-202ENST00000376237 CARHSP1Q9Y2V2 147 aaKnown RBP16.82■□□□□ 0.28
HLA-C-202ENST00000376237 CMYA5Q8N3K9 4069 aa16.82■□□□□ 0.28
HLA-C-202ENST00000376237 AGRNO00468 2067 aa16.81■□□□□ 0.28
HLA-C-202ENST00000376237 GCGP01275 180 aa16.81■□□□□ 0.28
HLA-C-202ENST00000376237 APOC4P55056 127 aa16.81■□□□□ 0.28
HLA-C-202ENST00000376237 ZC2HC1AQ96GY0 325 aa16.81■□□□□ 0.28
HLA-C-202ENST00000376237 RPL23P62829 140 aaKnown RBP16.8■□□□□ 0.28
HLA-C-202ENST00000376237 LINC00322Q6ZN03 302 aaPredicted RBP16.8■□□□□ 0.28
HLA-C-202ENST00000376237 C7orf71A4D174 169 aa16.8■□□□□ 0.28
HLA-C-202ENST00000376237 FABP5P3A8MUU1 101 aa16.8■□□□□ 0.28
HLA-C-202ENST00000376237 J3KRW8 73 aa16.8■□□□□ 0.28
HLA-C-202ENST00000376237 FXYD7P58549 80 aa16.8■□□□□ 0.28
HLA-C-202ENST00000376237 Q6AWC8 147 aa16.8■□□□□ 0.28
HLA-C-202ENST00000376237 C20orf144Q9BQM9 153 aa16.8■□□□□ 0.28
HLA-C-202ENST00000376237 CRXO43186 299 aaPredicted RBP16.79■□□□□ 0.28
HLA-C-202ENST00000376237 PFN1P07737 140 aaKnown RBP16.79■□□□□ 0.28
HLA-C-202ENST00000376237 RNASE4P34096 147 aaKnown RBP16.79■□□□□ 0.28
HLA-C-202ENST00000376237 FAM162BQ5T6X4 162 aa16.79■□□□□ 0.28
HLA-C-202ENST00000376237 GFI1BQ5VTD9 330 aa16.79■□□□□ 0.28
HLA-C-202ENST00000376237 TRAV12-2A0A075B6T6 113 aa16.78■□□□□ 0.28
HLA-C-202ENST00000376237 TRAV21A0A0B4J279 112 aa16.78■□□□□ 0.28
HLA-C-202ENST00000376237 K7EN84 100 aa16.78■□□□□ 0.28
HLA-C-202ENST00000376237 UBE2CO00762 179 aa16.78■□□□□ 0.28
HLA-C-202ENST00000376237 KIR3DS1Q14943 382 aa16.78■□□□□ 0.28
HLA-C-202ENST00000376237 ADIRFQ15847 76 aa16.78■□□□□ 0.28
HLA-C-202ENST00000376237 PRR9Q5T870 116 aa16.78■□□□□ 0.28
HLA-C-202ENST00000376237 PRR27Q6MZM9 219 aa16.78■□□□□ 0.28
HLA-C-202ENST00000376237 XCL2Q9UBD3 114 aa16.78■□□□□ 0.28
HLA-C-202ENST00000376237 CA1P00915 261 aaPredicted RBP16.77■□□□□ 0.28
HLA-C-202ENST00000376237 INSP01308 110 aa16.77■□□□□ 0.28
HLA-C-202ENST00000376237 CRIP1P50238 77 aa16.77■□□□□ 0.28
HLA-C-202ENST00000376237 ZNF80P51504 273 aaPredicted RBP16.77■□□□□ 0.28
HLA-C-202ENST00000376237 BTN1A1Q13410 526 aa16.77■□□□□ 0.28
HLA-C-202ENST00000376237 NOTCH1P46531 2555 aa16.77■□□□□ 0.28
HLA-C-202ENST00000376237 NBEAL1Q6ZS30 2694 aa16.76■□□□□ 0.27
HLA-C-202ENST00000376237 K7EIL1 84 aa16.76■□□□□ 0.27
HLA-C-202ENST00000376237 GIG44P09565 113 aaPredicted RBP16.76■□□□□ 0.27
HLA-C-202ENST00000376237 OR5I1Q13606 314 aa16.76■□□□□ 0.27
HLA-C-202ENST00000376237 ISOC2Q96AB3 205 aa16.76■□□□□ 0.27
HLA-C-202ENST00000376237 DAZAP1Q96EP5 407 aaKnown RBP16.76■□□□□ 0.27
HLA-C-202ENST00000376237 TRAV12-3A0A0B4J271 114 aa16.75■□□□□ 0.27
HLA-C-202ENST00000376237 PRB2P02812 416 aaPredicted RBP16.75■□□□□ 0.27
HLA-C-202ENST00000376237 SH2D1AO60880 128 aa16.75■□□□□ 0.27
HLA-C-202ENST00000376237 ZNF324O75467 553 aaPredicted RBP16.75■□□□□ 0.27
HLA-C-202ENST00000376237 APOC3P02656 99 aa16.75■□□□□ 0.27
HLA-C-202ENST00000376237 FAM231DQ6ZW35 169 aa16.75■□□□□ 0.27
HLA-C-202ENST00000376237 FBN3Q75N90 2809 aa16.74■□□□□ 0.27
HLA-C-202ENST00000376237 C19orf71A6NCJ1 209 aa16.74■□□□□ 0.27
HLA-C-202ENST00000376237 FRMD6-AS1P0C7T7 363 aa16.74■□□□□ 0.27
HLA-C-202ENST00000376237 TMEM256Q8N2U0 113 aa16.74■□□□□ 0.27
HLA-C-202ENST00000376237 SVBPQ8N300 66 aa16.74■□□□□ 0.27
HLA-C-202ENST00000376237 B4DEV8 164 aa16.73■□□□□ 0.27
HLA-C-202ENST00000376237 ERVFC1-1P60608 527 aa16.73■□□□□ 0.27
HLA-C-202ENST00000376237 IBA57Q5T440 356 aaKnown RBP16.73■□□□□ 0.27
HLA-C-202ENST00000376237 CSNK1G2-AS1Q8NCQ2 148 aa16.73■□□□□ 0.27
HLA-C-202ENST00000376237 OSTCQ9NRP0 149 aa16.73■□□□□ 0.27
HLA-C-202ENST00000376237 M0R036 132 aa16.72■□□□□ 0.27
HLA-C-202ENST00000376237 SFRP2Q96HF1 295 aa16.72■□□□□ 0.27
HLA-C-202ENST00000376237 GOLT1BQ9Y3E0 138 aa16.72■□□□□ 0.27
HLA-C-202ENST00000376237 H7BYZ3 331 aa16.71■□□□□ 0.27
HLA-C-202ENST00000376237 P01737 135 aa16.71■□□□□ 0.27
HLA-C-202ENST00000376237 DEFB121Q5J5C9 76 aa16.71■□□□□ 0.27
HLA-C-202ENST00000376237 Q6ZWC4 215 aa16.71■□□□□ 0.27
HLA-C-202ENST00000376237 C15orf54Q8N8G6 183 aa16.71■□□□□ 0.27
HLA-C-202ENST00000376237 NUDT10Q8NFP7 164 aa16.71■□□□□ 0.27
HLA-C-202ENST00000376237 NUDT11Q96G61 164 aa16.71■□□□□ 0.27
HLA-C-202ENST00000376237 PYGO2Q9BRQ0 406 aa16.71■□□□□ 0.27
HLA-C-202ENST00000376237 FAM159AQ6UWV7 190 aa16.7■□□□□ 0.26
HLA-C-202ENST00000376237 RNASE7Q9H1E1 156 aaKnown RBP16.7■□□□□ 0.26
HLA-C-202ENST00000376237 SNAPINO95295 136 aa16.7■□□□□ 0.26
HLA-C-202ENST00000376237 ORM1P02763 201 aa16.7■□□□□ 0.26
HLA-C-202ENST00000376237 RBMY1A1P0DJD3 496 aaKnown RBP16.7■□□□□ 0.26
HLA-C-202ENST00000376237 RBMY1CP0DJD4 496 aa16.7■□□□□ 0.26
HLA-C-202ENST00000376237 RBMY1FQ15415 496 aaKnown RBP16.7■□□□□ 0.26
HLA-C-202ENST00000376237 C1orf158Q8N1D5 194 aa16.7■□□□□ 0.26
HLA-C-202ENST00000376237 KCNS1Q96KK3 526 aa16.7■□□□□ 0.26
HLA-C-202ENST00000376237 TMEM208Q9BTX3 173 aa16.7■□□□□ 0.26
HLA-C-202ENST00000376237 MT-ND4LP03901 98 aa16.69■□□□□ 0.26
HLA-C-202ENST00000376237 TDRG1Q3Y452 100 aa16.69■□□□□ 0.26
HLA-C-202ENST00000376237 LINC01559Q495D7 138 aa16.69■□□□□ 0.26
HLA-C-202ENST00000376237 Q6ZQT7 251 aa16.69■□□□□ 0.26
HLA-C-202ENST00000376237 CLRN3Q8NCR9 226 aa16.69■□□□□ 0.26
HLA-C-202ENST00000376237 OR10G8Q8NGN5 311 aa16.69■□□□□ 0.26
HLA-C-202ENST00000376237 LINC01587Q99440 93 aa16.69■□□□□ 0.26
HLA-C-202ENST00000376237 LINC00467Q9BRT7 94 aa16.69■□□□□ 0.26
HLA-C-202ENST00000376237 PPP1R2P9O14990 202 aa16.68■□□□□ 0.26
HLA-C-202ENST00000376237 GATCO43716 136 aaKnown RBP16.68■□□□□ 0.26
HLA-C-202ENST00000376237 ATP6V1G1O75348 118 aa16.68■□□□□ 0.26
HLA-C-202ENST00000376237 S100A1P23297 94 aa16.68■□□□□ 0.26
HLA-C-202ENST00000376237 ANAPC16Q96DE5 110 aa16.68■□□□□ 0.26
HLA-C-202ENST00000376237 IGHV1OR15-1A0A075B7D0 117 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms