RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 CTSGP08311 255 aa14.09□□□□□ -0.15
PTPDC1-202ENST00000375360 DEFB121Q5J5C9 76 aa14.08□□□□□ -0.16
PTPDC1-202ENST00000375360 BCL6BQ8N143 479 aaPredicted RBP14.08□□□□□ -0.16
PTPDC1-202ENST00000375360 CHCHD1Q96BP2 118 aaKnown RBP14.08□□□□□ -0.16
PTPDC1-202ENST00000375360 TMEM14CQ9P0S9 112 aa14.08□□□□□ -0.16
PTPDC1-202ENST00000375360 A0A0U1RRA0 63 aa14.08□□□□□ -0.16
PTPDC1-202ENST00000375360 A0A1B0GV90 55 aa14.08□□□□□ -0.16
PTPDC1-202ENST00000375360 HIST2H2BCQ6DN03 193 aa14.08□□□□□ -0.16
PTPDC1-202ENST00000375360 NPBQ8NG41 125 aa14.08□□□□□ -0.16
PTPDC1-202ENST00000375360 SPRY2O43597 315 aa14.08□□□□□ -0.16
PTPDC1-202ENST00000375360 C3orf79P0CE67 100 aa14.08□□□□□ -0.16
PTPDC1-202ENST00000375360 CD300EQ496F6 205 aaPredicted RBP14.08□□□□□ -0.16
PTPDC1-202ENST00000375360 LYPD6BQ8NI32 183 aa14.08□□□□□ -0.16
PTPDC1-202ENST00000375360 C2orf88Q9BSF0 95 aa14.08□□□□□ -0.16
PTPDC1-202ENST00000375360 ELANEP08246 267 aa14.07□□□□□ -0.16
PTPDC1-202ENST00000375360 LBHQ53QV2 105 aaPredicted RBP14.07□□□□□ -0.16
PTPDC1-202ENST00000375360 IGLV11-55A0A075B6I3 123 aa14.07□□□□□ -0.16
PTPDC1-202ENST00000375360 RASL11AQ6T310 242 aa14.07□□□□□ -0.16
PTPDC1-202ENST00000375360 KMT2EQ8IZD2 1858 aa14.07□□□□□ -0.16
PTPDC1-202ENST00000375360 TRAV9-2A0A087WT02 112 aa14.07□□□□□ -0.16
PTPDC1-202ENST00000375360 C11orf52Q96A22 123 aa14.07□□□□□ -0.16
PTPDC1-202ENST00000375360 PHLDA1Q8WV24 401 aaPredicted RBP14.07□□□□□ -0.16
PTPDC1-202ENST00000375360 SPOCK3Q9BQ16 436 aa14.07□□□□□ -0.16
PTPDC1-202ENST00000375360 IGHV7-4-1A0A0J9YVY3 117 aa14.06□□□□□ -0.16
PTPDC1-202ENST00000375360 TEX22C9J3V5 150 aa14.06□□□□□ -0.16
PTPDC1-202ENST00000375360 APOMO95445 188 aa14.06□□□□□ -0.16
PTPDC1-202ENST00000375360 CD28P10747 220 aa14.06□□□□□ -0.16
PTPDC1-202ENST00000375360 HOXD3P31249 432 aaPredicted RBP14.06□□□□□ -0.16
PTPDC1-202ENST00000375360 ZNF415Q09FC8 603 aa14.06□□□□□ -0.16
PTPDC1-202ENST00000375360 LAGE3Q14657 143 aa14.06□□□□□ -0.16
PTPDC1-202ENST00000375360 SIRPDQ9H106 197 aa14.06□□□□□ -0.16
PTPDC1-202ENST00000375360 CSTL1Q9H114 145 aa14.06□□□□□ -0.16
PTPDC1-202ENST00000375360 INSP01308 110 aa14.06□□□□□ -0.16
PTPDC1-202ENST00000375360 FABP2P12104 132 aa14.06□□□□□ -0.16
PTPDC1-202ENST00000375360 SLAQ13239 276 aa14.06□□□□□ -0.16
PTPDC1-202ENST00000375360 SFTA2Q6UW10 78 aa14.06□□□□□ -0.16
PTPDC1-202ENST00000375360 K7EN84 100 aa14.05□□□□□ -0.16
PTPDC1-202ENST00000375360 C10orf91Q5T1B1 145 aa14.05□□□□□ -0.16
PTPDC1-202ENST00000375360 AJUBAQ96IF1 538 aa14.05□□□□□ -0.16
PTPDC1-202ENST00000375360 MS4A6AQ9H2W1 248 aa14.05□□□□□ -0.16
PTPDC1-202ENST00000375360 ANXA2RQ3ZCQ2 193 aa14.05□□□□□ -0.16
PTPDC1-202ENST00000375360 DYNAPQ8N1N2 210 aa14.05□□□□□ -0.16
PTPDC1-202ENST00000375360 PET117Q6UWS5 81 aa14.05□□□□□ -0.16
PTPDC1-202ENST00000375360 TMEM158Q8WZ71 300 aa14.05□□□□□ -0.16
PTPDC1-202ENST00000375360 AGPAT4-IT1Q9H0P7 198 aa14.05□□□□□ -0.16
PTPDC1-202ENST00000375360 DPM2O94777 84 aa14.05□□□□□ -0.16
PTPDC1-202ENST00000375360 C5orf56Q8N8D9 126 aa14.05□□□□□ -0.16
PTPDC1-202ENST00000375360 ZNF492Q9P255 531 aa14.05□□□□□ -0.16
PTPDC1-202ENST00000375360 CFHR3Q02985 330 aa14.04□□□□□ -0.16
PTPDC1-202ENST00000375360 IGHV3-16A0A0C4DH30 117 aa14.04□□□□□ -0.16
PTPDC1-202ENST00000375360 SMPXQ9UHP9 88 aa14.04□□□□□ -0.16
PTPDC1-202ENST00000375360 PRSS57Q6UWY2 283 aa14.04□□□□□ -0.16
PTPDC1-202ENST00000375360 HCFC1P51610 2035 aa14.04□□□□□ -0.16
PTPDC1-202ENST00000375360 OR13C6PQ8NH95 151 aa14.03□□□□□ -0.16
PTPDC1-202ENST00000375360 MRPL27Q9P0M9 148 aaKnown RBP14.03□□□□□ -0.16
PTPDC1-202ENST00000375360 hDV102S1A0JD36 115 aa14.03□□□□□ -0.16
PTPDC1-202ENST00000375360 LINC01548A6NM66 108 aa14.03□□□□□ -0.16
PTPDC1-202ENST00000375360 C18orf32Q8TCD1 76 aa14.03□□□□□ -0.16
PTPDC1-202ENST00000375360 CMC4P56277 68 aaPredicted RBP14.03□□□□□ -0.16
PTPDC1-202ENST00000375360 TMEM190Q8WZ59 177 aa14.03□□□□□ -0.16
PTPDC1-202ENST00000375360 COX6CP09669 75 aa14.03□□□□□ -0.16
PTPDC1-202ENST00000375360 SMIM12Q96EX1 92 aa14.03□□□□□ -0.16
PTPDC1-202ENST00000375360 LAMTOR2Q9Y2Q5 125 aa14.03□□□□□ -0.16
PTPDC1-202ENST00000375360 TNFRSF6BO95407 300 aa14.02□□□□□ -0.16
PTPDC1-202ENST00000375360 OR2K2Q8NGT1 345 aa14.02□□□□□ -0.16
PTPDC1-202ENST00000375360 CHTOPQ9Y3Y2 248 aaKnown RBP14.02□□□□□ -0.16
PTPDC1-202ENST00000375360 TRAV26-2A0A0B4J265 109 aa14.02□□□□□ -0.17
PTPDC1-202ENST00000375360 A8MWP6 167 aa14.02□□□□□ -0.17
PTPDC1-202ENST00000375360 SLURP1P55000 103 aa14.02□□□□□ -0.17
PTPDC1-202ENST00000375360 RPL36AP83881 106 aaKnown RBP14.02□□□□□ -0.17
PTPDC1-202ENST00000375360 RPL36ALQ969Q0 106 aaKnown RBP14.02□□□□□ -0.17
PTPDC1-202ENST00000375360 CDKN1BP46527 198 aa14.01□□□□□ -0.17
PTPDC1-202ENST00000375360 GFRA4Q9GZZ7 299 aa14.01□□□□□ -0.17
PTPDC1-202ENST00000375360 FAM104BQ5XKR9 115 aa14.01□□□□□ -0.17
PTPDC1-202ENST00000375360 NDUFAF3Q9BU61 184 aa14.01□□□□□ -0.17
PTPDC1-202ENST00000375360 FOXE3Q13461 319 aa14□□□□□ -0.17
PTPDC1-202ENST00000375360 FAM231DQ6ZW35 169 aa14□□□□□ -0.17
PTPDC1-202ENST00000375360 C1QTNF4Q9BXJ3 329 aa14□□□□□ -0.17
PTPDC1-202ENST00000375360 VCYO14598 125 aa14□□□□□ -0.17
PTPDC1-202ENST00000375360 IGKCP01834 107 aa14□□□□□ -0.17
PTPDC1-202ENST00000375360 DEFB1P60022 68 aa14□□□□□ -0.17
PTPDC1-202ENST00000375360 DPH3Q96FX2 82 aa14□□□□□ -0.17
PTPDC1-202ENST00000375360 P0C879 139 aa14□□□□□ -0.17
PTPDC1-202ENST00000375360 FAM167A-AS1Q96KT0 104 aa14□□□□□ -0.17
PTPDC1-202ENST00000375360 XIRP2A4UGR9 3374 aa14□□□□□ -0.17
PTPDC1-202ENST00000375360 RNASE1P07998 156 aaKnown RBP14□□□□□ -0.17
PTPDC1-202ENST00000375360 C1orf159Q96HA4 380 aa14□□□□□ -0.17
PTPDC1-202ENST00000375360 FANCD2OSQ96PS1 177 aa14□□□□□ -0.17
PTPDC1-202ENST00000375360 GP9P14770 177 aa13.99□□□□□ -0.17
PTPDC1-202ENST00000375360 H3BRM9 83 aa13.99□□□□□ -0.17
PTPDC1-202ENST00000375360 LINC00469Q8N7U9 141 aa13.99□□□□□ -0.17
PTPDC1-202ENST00000375360 A0A087WX48 190 aa13.99□□□□□ -0.17
PTPDC1-202ENST00000375360 CT83Q5H943 113 aa13.99□□□□□ -0.17
PTPDC1-202ENST00000375360 FAM231BA6NCW3 169 aa13.98□□□□□ -0.17
PTPDC1-202ENST00000375360 C11orf1Q9H5F2 150 aa13.98□□□□□ -0.17
PTPDC1-202ENST00000375360 BUB3O43684 328 aa13.98□□□□□ -0.17
PTPDC1-202ENST00000375360 TRIOO75962 3097 aa13.98□□□□□ -0.17
PTPDC1-202ENST00000375360 IGHV1OR15-1A0A075B7D0 117 aa13.98□□□□□ -0.17
PTPDC1-202ENST00000375360 SMIM13P0DJ93 91 aa13.98□□□□□ -0.17
PTPDC1-202ENST00000375360 EGR2P11161 476 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms