RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 H3BQ15 152 aa11.89□□□□□ -0.51
H2AFX-201ENST00000375167 CDC34P49427 236 aaPredicted RBP11.89□□□□□ -0.51
H2AFX-201ENST00000375167 RAB5CP51148 216 aa11.89□□□□□ -0.51
H2AFX-201ENST00000375167 DPPA3Q6W0C5 159 aa11.89□□□□□ -0.51
H2AFX-201ENST00000375167 SLC50A1Q9BRV3 221 aa11.89□□□□□ -0.51
H2AFX-201ENST00000375167 ZNF331Q9NQX6 463 aaPredicted RBP11.89□□□□□ -0.51
H2AFX-201ENST00000375167 PKHD1L1Q86WI1 4243 aa11.88□□□□□ -0.51
H2AFX-201ENST00000375167 F6UB75 175 aa11.88□□□□□ -0.51
H2AFX-201ENST00000375167 SIVA1O15304 175 aa11.88□□□□□ -0.51
H2AFX-201ENST00000375167 OR7C2O60412 319 aa11.88□□□□□ -0.51
H2AFX-201ENST00000375167 SNRPCP09234 159 aaKnown RBP11.88□□□□□ -0.51
H2AFX-201ENST00000375167 PDE6HQ13956 83 aa11.88□□□□□ -0.51
H2AFX-201ENST00000375167 PSG3Q16557 428 aa11.88□□□□□ -0.51
H2AFX-201ENST00000375167 C9orf62Q8N4C0 152 aa11.88□□□□□ -0.51
H2AFX-201ENST00000375167 ZNF738Q8NE65 137 aa11.88□□□□□ -0.51
H2AFX-201ENST00000375167 SAT2Q96F10 170 aaPredicted RBP11.88□□□□□ -0.51
H2AFX-201ENST00000375167 KRTAP9-2Q9BYQ4 174 aa11.88□□□□□ -0.51
H2AFX-201ENST00000375167 ZNF705GA8MUZ8 300 aaPredicted RBP11.87□□□□□ -0.51
H2AFX-201ENST00000375167 TEX46H3BTG2 121 aa11.87□□□□□ -0.51
H2AFX-201ENST00000375167 OR5I1Q13606 314 aa11.87□□□□□ -0.51
H2AFX-201ENST00000375167 MIR17HGQ75NE6 70 aa11.87□□□□□ -0.51
H2AFX-201ENST00000375167 PHYHIPLQ96FC7 376 aa11.87□□□□□ -0.51
H2AFX-201ENST00000375167 FAM167A-AS1Q96KT0 104 aa11.87□□□□□ -0.51
H2AFX-201ENST00000375167 SLC25A2Q9BXI2 301 aa11.87□□□□□ -0.51
H2AFX-201ENST00000375167 SH3BGRL3Q9H299 93 aa11.87□□□□□ -0.51
H2AFX-201ENST00000375167 TNFRSF18Q9Y5U5 241 aa11.87□□□□□ -0.51
H2AFX-201ENST00000375167 H3BTX0 84 aa11.86□□□□□ -0.51
H2AFX-201ENST00000375167 SLC17A3O00476 420 aa11.86□□□□□ -0.51
H2AFX-201ENST00000375167 ZNF253O75346 499 aa11.86□□□□□ -0.51
H2AFX-201ENST00000375167 DUSP14O95147 198 aaKnown RBP11.86□□□□□ -0.51
H2AFX-201ENST00000375167 HIST1H1EP10412 219 aaKnown RBP11.86□□□□□ -0.51
H2AFX-201ENST00000375167 TSPOP30536 169 aa11.86□□□□□ -0.51
H2AFX-201ENST00000375167 FAM122CQ6P4D5 195 aa11.86□□□□□ -0.51
H2AFX-201ENST00000375167 NTN5Q8WTR8 489 aaPredicted RBP11.86□□□□□ -0.51
H2AFX-201ENST00000375167 IGF2BP2-AS1Q96M15 143 aa11.86□□□□□ -0.51
H2AFX-201ENST00000375167 PAXXQ9BUH6 204 aa11.86□□□□□ -0.51
H2AFX-201ENST00000375167 OR51M1Q9H341 326 aa11.86□□□□□ -0.51
H2AFX-201ENST00000375167 AAMDCQ9H7C9 122 aa11.86□□□□□ -0.51
H2AFX-201ENST00000375167 FAM30AQ9NZY2 134 aa11.86□□□□□ -0.51
H2AFX-201ENST00000375167 A0A0J9YY99 117 aa11.85□□□□□ -0.51
H2AFX-201ENST00000375167 A8MTW9 85 aa11.85□□□□□ -0.51
H2AFX-201ENST00000375167 PYYP10082 97 aa11.85□□□□□ -0.51
H2AFX-201ENST00000375167 RAB2AP61019 212 aa11.85□□□□□ -0.51
H2AFX-201ENST00000375167 RPUSD4Q96CM3 377 aaKnown RBP11.85□□□□□ -0.51
H2AFX-201ENST00000375167 TRBV19A0A075B6N1 114 aa11.84□□□□□ -0.51
H2AFX-201ENST00000375167 CTXND1A0A1B0GTU2 59 aa11.84□□□□□ -0.51
H2AFX-201ENST00000375167 CXorf1O96002 111 aa11.84□□□□□ -0.51
H2AFX-201ENST00000375167 ASIPP42127 132 aa11.84□□□□□ -0.51
H2AFX-201ENST00000375167 CNN1P51911 297 aaKnown RBP11.84□□□□□ -0.51
H2AFX-201ENST00000375167 UBE2L3P68036 154 aaKnown RBP11.84□□□□□ -0.51
H2AFX-201ENST00000375167 FAM74A1Q5RGS3 127 aa11.84□□□□□ -0.51
H2AFX-201ENST00000375167 OR8A1Q8NGG7 326 aa11.84□□□□□ -0.51
H2AFX-201ENST00000375167 TMEM167BQ9NRX6 74 aa11.84□□□□□ -0.51
H2AFX-201ENST00000375167 PRM2P04554 102 aa11.83□□□□□ -0.52
H2AFX-201ENST00000375167 OR10J6PQ8NGY7 276 aa11.83□□□□□ -0.52
H2AFX-201ENST00000375167 RAB24Q969Q5 203 aa11.83□□□□□ -0.52
H2AFX-201ENST00000375167 PRELID1Q9Y255 219 aa11.83□□□□□ -0.52
H2AFX-201ENST00000375167 DNAH8Q96JB1 4490 aa11.83□□□□□ -0.52
H2AFX-201ENST00000375167 KRTAP9-6A0A140TA67 174 aa11.82□□□□□ -0.52
H2AFX-201ENST00000375167 NDUFB4O95168 129 aa11.82□□□□□ -0.52
H2AFX-201ENST00000375167 NBEAP1P0C6P0 100 aa11.82□□□□□ -0.52
H2AFX-201ENST00000375167 STAG3L2P0CL84 134 aa11.82□□□□□ -0.52
H2AFX-201ENST00000375167 STAG3L3P0CL85 134 aa11.82□□□□□ -0.52
H2AFX-201ENST00000375167 AMTNQ6UX39 209 aa11.82□□□□□ -0.52
H2AFX-201ENST00000375167 BLNKQ8WV28 456 aa11.82□□□□□ -0.52
H2AFX-201ENST00000375167 TMED6Q8WW62 240 aa11.82□□□□□ -0.52
H2AFX-201ENST00000375167 BOLA1Q9Y3E2 137 aa11.82□□□□□ -0.52
H2AFX-201ENST00000375167 PLAC8L1A1L4L8 177 aa11.81□□□□□ -0.52
H2AFX-201ENST00000375167 NPIPB6E9PJ23 425 aa11.81□□□□□ -0.52
H2AFX-201ENST00000375167 H3BNG1 76 aa11.81□□□□□ -0.52
H2AFX-201ENST00000375167 INSP01308 110 aa11.81□□□□□ -0.52
H2AFX-201ENST00000375167 PRB4P10163 310 aaPredicted RBP11.81□□□□□ -0.52
H2AFX-201ENST00000375167 HIST1H1AQ02539 215 aaPredicted RBP11.81□□□□□ -0.52
H2AFX-201ENST00000375167 OR10J4P0C629 311 aa11.8□□□□□ -0.52
H2AFX-201ENST00000375167 PPT1P50897 306 aa11.8□□□□□ -0.52
H2AFX-201ENST00000375167 FXYD5Q96DB9 178 aa11.8□□□□□ -0.52
H2AFX-201ENST00000375167 MRPL53Q96EL3 112 aaKnown RBP11.8□□□□□ -0.52
H2AFX-201ENST00000375167 PRAC2D3DTV9 90 aa11.79□□□□□ -0.52
H2AFX-201ENST00000375167 ARL14EPLP0DKL9 152 aa11.79□□□□□ -0.52
H2AFX-201ENST00000375167 CSN1S1P47710 185 aa11.79□□□□□ -0.52
H2AFX-201ENST00000375167 IQCF2Q8IXL9 164 aa11.79□□□□□ -0.52
H2AFX-201ENST00000375167 FAM213BQ8TBF2 198 aa11.79□□□□□ -0.52
H2AFX-201ENST00000375167 NKX6-2Q9C056 277 aaPredicted RBP11.79□□□□□ -0.52
H2AFX-201ENST00000375167 PPP1R14DQ9NXH3 145 aa11.79□□□□□ -0.52
H2AFX-201ENST00000375167 MAP1LC3B2A6NCE7 125 aa11.79□□□□□ -0.52
H2AFX-201ENST00000375167 H2AFB1P0C5Y9 115 aa11.79□□□□□ -0.52
H2AFX-201ENST00000375167 SULT1A2P50226 295 aa11.79□□□□□ -0.52
H2AFX-201ENST00000375167 CMTM2Q8TAZ6 248 aa11.79□□□□□ -0.52
H2AFX-201ENST00000375167 MAP1LC3BQ9GZQ8 125 aa11.79□□□□□ -0.52
H2AFX-201ENST00000375167 TIMM8BQ9Y5J9 83 aaPredicted RBP11.79□□□□□ -0.52
H2AFX-201ENST00000375167 M0R2Z0 102 aa11.78□□□□□ -0.52
H2AFX-201ENST00000375167 M0R3E3 92 aa11.78□□□□□ -0.52
H2AFX-201ENST00000375167 NXPH4O95158 308 aa11.78□□□□□ -0.52
H2AFX-201ENST00000375167 AZU1P20160 251 aa11.78□□□□□ -0.52
H2AFX-201ENST00000375167 SPINK13Q1W4C9 94 aa11.78□□□□□ -0.52
H2AFX-201ENST00000375167 EXOC3-AS1Q8N2X6 119 aa11.78□□□□□ -0.52
H2AFX-201ENST00000375167 TRAV9-2A0A087WT02 112 aa11.77□□□□□ -0.53
H2AFX-201ENST00000375167 RS1O15537 224 aa11.77□□□□□ -0.53
H2AFX-201ENST00000375167 EIF3GO75821 320 aaKnown RBP eCLIP11.77□□□□□ -0.533e-9■□□□□ 10.9
H2AFX-201ENST00000375167 GCHFRP30047 84 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms