RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 IGLV11-55A0A075B6I3 123 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 IGHV1-24A0A0C4DH33 117 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 TCRAP04437 139 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 NDPQ00604 133 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 S100A7AQ86SG5 101 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 FAM231BA6NCW3 169 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 LINC01548A6NM66 108 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 H3BRN7 92 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 LEPROTL1O95214 131 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 MFAP4P55083 255 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 TMEM97Q5BJF2 176 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 LINC01545Q5VT33 79 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 Q6ZSV7 163 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 BPIFA4PQ86YQ2 179 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 C5orf56Q8N8D9 126 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 ZNF491Q8N8L2 437 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 Q8N9W7 124 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 FANCD2OSQ96PS1 177 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 MLST8Q9BVC4 326 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 THYN1Q9P016 225 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 TP73-AS1Q9UF72 201 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 MOB4Q9Y3A3 225 aa11.05□□□□□ -0.64
HMGA1-203ENST00000374116 WI2-2373I1.2A0A1W2PRP0 233 aa11.04□□□□□ -0.64
HMGA1-203ENST00000374116 GNG7O60262 68 aa11.04□□□□□ -0.64
HMGA1-203ENST00000374116 LTAP01374 205 aa11.04□□□□□ -0.64
HMGA1-203ENST00000374116 EGR2P11161 476 aaPredicted RBP11.04□□□□□ -0.64
HMGA1-203ENST00000374116 HIST2H2BDQ6DRA6 164 aa11.04□□□□□ -0.64
HMGA1-203ENST00000374116 RNF125Q96EQ8 232 aa11.04□□□□□ -0.64
HMGA1-203ENST00000374116 MDFIQ99750 246 aa11.04□□□□□ -0.64
HMGA1-203ENST00000374116 LINC00527Q9UJ94 153 aa11.04□□□□□ -0.64
HMGA1-203ENST00000374116 A6NDN8 102 aa11.03□□□□□ -0.64
HMGA1-203ENST00000374116 MAP1LC3CQ9BXW4 147 aa11.03□□□□□ -0.64
HMGA1-203ENST00000374116 ZNF492Q9P255 531 aa11.03□□□□□ -0.64
HMGA1-203ENST00000374116 COL6A5A8TX70 2615 aa11.03□□□□□ -0.64
HMGA1-203ENST00000374116 IGHV7-81A0A0B4J1V7 117 aa11.02□□□□□ -0.64
HMGA1-203ENST00000374116 TRBV6-1A0A0K0K1D8 114 aa11.02□□□□□ -0.64
HMGA1-203ENST00000374116 H3BTX0 84 aa11.02□□□□□ -0.64
HMGA1-203ENST00000374116 CA1P00915 261 aaPredicted RBP11.02□□□□□ -0.64
HMGA1-203ENST00000374116 IL4P05112 153 aa11.02□□□□□ -0.64
HMGA1-203ENST00000374116 KLK9Q2XQG4 91 aa11.02□□□□□ -0.64
HMGA1-203ENST00000374116 LYPD1Q8N2G4 141 aa11.02□□□□□ -0.64
HMGA1-203ENST00000374116 ZNF702PQ9H963 129 aa11.02□□□□□ -0.64
HMGA1-203ENST00000374116 HSPB8Q9UJY1 196 aa11.02□□□□□ -0.64
HMGA1-203ENST00000374116 KLK9Q9UKQ9 250 aa11.02□□□□□ -0.64
HMGA1-203ENST00000374116 TRBV19A0A075B6N1 114 aa11.02□□□□□ -0.65
HMGA1-203ENST00000374116 A0A087X0K7 114 aa11.02□□□□□ -0.65
HMGA1-203ENST00000374116 LOC102724200A0A096LPH7 203 aaPredicted RBP11.02□□□□□ -0.65
HMGA1-203ENST00000374116 TMEM189A5PLL7 270 aa11.02□□□□□ -0.65
HMGA1-203ENST00000374116 PRSS47A8MTI9 375 aa11.02□□□□□ -0.65
HMGA1-203ENST00000374116 SCGB2A1O75556 95 aa11.02□□□□□ -0.65
HMGA1-203ENST00000374116 CT83Q5H943 113 aa11.02□□□□□ -0.65
HMGA1-203ENST00000374116 NPFFR1Q9GZQ6 430 aa11.02□□□□□ -0.65
HMGA1-203ENST00000374116 HAX1O00165 279 aa11.01□□□□□ -0.65
HMGA1-203ENST00000374116 HBBP68871 147 aa11.01□□□□□ -0.65
HMGA1-203ENST00000374116 SGK494Q96LW2 274 aa11.01□□□□□ -0.65
HMGA1-203ENST00000374116 AP1S3Q96PC3 154 aa11.01□□□□□ -0.65
HMGA1-203ENST00000374116 PRSS22Q9GZN4 317 aa11.01□□□□□ -0.65
HMGA1-203ENST00000374116 C21orf62Q9NYP8 219 aa11.01□□□□□ -0.65
HMGA1-203ENST00000374116 TENM1Q9UKZ4 2725 aa11.01□□□□□ -0.65
HMGA1-203ENST00000374116 A0A1B0GV72 72 aa11□□□□□ -0.65
HMGA1-203ENST00000374116 F8W735 103 aaPredicted RBP11□□□□□ -0.65
HMGA1-203ENST00000374116 SIVA1O15304 175 aa11□□□□□ -0.65
HMGA1-203ENST00000374116 FGF6P10767 208 aa11□□□□□ -0.65
HMGA1-203ENST00000374116 OR1N2Q8NGR9 330 aa11□□□□□ -0.65
HMGA1-203ENST00000374116 OR2K2Q8NGT1 345 aa11□□□□□ -0.65
HMGA1-203ENST00000374116 LINC01006Q8NI28 216 aa11□□□□□ -0.65
HMGA1-203ENST00000374116 NDFIP1Q9BT67 221 aa11□□□□□ -0.65
HMGA1-203ENST00000374116 RPP21Q9H633 154 aaKnown RBP11□□□□□ -0.65
HMGA1-203ENST00000374116 C19orf71A6NCJ1 209 aa11□□□□□ -0.65
HMGA1-203ENST00000374116 A8MWL6 223 aa11□□□□□ -0.65
HMGA1-203ENST00000374116 FCGR2BP31994 310 aaPredicted RBP11□□□□□ -0.65
HMGA1-203ENST00000374116 LINC00173Q6ZV60 143 aa11□□□□□ -0.65
HMGA1-203ENST00000374116 Q86TA4 180 aa11□□□□□ -0.65
HMGA1-203ENST00000374116 EXOC3-AS1Q8N2X6 119 aa11□□□□□ -0.65
HMGA1-203ENST00000374116 DAZAP1Q96EP5 407 aaKnown RBP11□□□□□ -0.65
HMGA1-203ENST00000374116 HIGD1CA8MV81 97 aa10.99□□□□□ -0.65
HMGA1-203ENST00000374116 MRPS12O15235 138 aaKnown RBP10.99□□□□□ -0.65
HMGA1-203ENST00000374116 P01737 135 aa10.99□□□□□ -0.65
HMGA1-203ENST00000374116 HSD52Q0P140 79 aa10.99□□□□□ -0.65
HMGA1-203ENST00000374116 C16orf54Q6UWD8 224 aa10.99□□□□□ -0.65
HMGA1-203ENST00000374116 C10orf99Q6UWK7 81 aa10.99□□□□□ -0.65
HMGA1-203ENST00000374116 OR10AG1Q8NH19 301 aa10.99□□□□□ -0.65
HMGA1-203ENST00000374116 TMEM158Q8WZ71 300 aa10.99□□□□□ -0.65
HMGA1-203ENST00000374116 SSBP4Q9BWG4 385 aaPredicted RBP10.99□□□□□ -0.65
HMGA1-203ENST00000374116 S4R3C0 116 aa10.99□□□□□ -0.65
HMGA1-203ENST00000374116 K7EQM0 130 aa10.98□□□□□ -0.65
HMGA1-203ENST00000374116 IGLV2-11P01706 119 aa10.98□□□□□ -0.65
HMGA1-203ENST00000374116 PDE6HQ13956 83 aa10.98□□□□□ -0.65
HMGA1-203ENST00000374116 SIGLEC15Q6ZMC9 328 aa10.98□□□□□ -0.65
HMGA1-203ENST00000374116 GOLT1AQ6ZVE7 132 aa10.98□□□□□ -0.65
HMGA1-203ENST00000374116 TMEM75Q8N9X5 138 aa10.98□□□□□ -0.65
HMGA1-203ENST00000374116 OR9G4Q8NGQ1 327 aa10.98□□□□□ -0.65
HMGA1-203ENST00000374116 ZNF414Q96IQ9 312 aa10.98□□□□□ -0.65
HMGA1-203ENST00000374116 GFRA4Q9GZZ7 299 aa10.98□□□□□ -0.65
HMGA1-203ENST00000374116 LINC00322Q6ZN03 302 aaPredicted RBP10.98□□□□□ -0.65
HMGA1-203ENST00000374116 C11orf44Q8N8P7 122 aa10.98□□□□□ -0.65
HMGA1-203ENST00000374116 FAM110DQ8TAY7 271 aaPredicted RBP10.98□□□□□ -0.65
HMGA1-203ENST00000374116 A0A0G2JLM5 398 aa10.97□□□□□ -0.65
HMGA1-203ENST00000374116 A0A1W2PPM0 123 aa10.97□□□□□ -0.65
HMGA1-203ENST00000374116 NPIPB6E9PJ23 425 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms