RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 HERVK_113P63121 156 aa11.3□□□□□ -0.6
LMX1B-202ENST00000373474 C11orf44Q8N8P7 122 aa11.3□□□□□ -0.6
LMX1B-202ENST00000373474 C20orf78Q9BR46 151 aa11.3□□□□□ -0.6
LMX1B-202ENST00000373474 IGLV3-9A0A075B6K5 115 aa11.3□□□□□ -0.6
LMX1B-202ENST00000373474 F6UB75 175 aa11.3□□□□□ -0.6
LMX1B-202ENST00000373474 OVOL3O00110 214 aa11.3□□□□□ -0.6
LMX1B-202ENST00000373474 KLF5Q13887 457 aaPredicted RBP11.3□□□□□ -0.6
LMX1B-202ENST00000373474 PFN2P35080 140 aa11.3□□□□□ -0.6
LMX1B-202ENST00000373474 PRR25Q96S07 402 aa11.3□□□□□ -0.6
LMX1B-202ENST00000373474 ORMDL1Q9P0S3 153 aa11.3□□□□□ -0.6
LMX1B-202ENST00000373474 K7EMI3 77 aa11.29□□□□□ -0.6
LMX1B-202ENST00000373474 CCL25O15444 150 aa11.29□□□□□ -0.6
LMX1B-202ENST00000373474 LTAP01374 205 aa11.29□□□□□ -0.6
LMX1B-202ENST00000373474 RUSC1-AS1Q66K80 236 aa11.29□□□□□ -0.6
LMX1B-202ENST00000373474 AMTNQ6UX39 209 aa11.29□□□□□ -0.6
LMX1B-202ENST00000373474 ZC2HC1AQ96GY0 325 aa11.29□□□□□ -0.6
LMX1B-202ENST00000373474 SMIM2Q9BVW6 85 aa11.29□□□□□ -0.6
LMX1B-202ENST00000373474 DNAJC13O75165 2243 aa11.29□□□□□ -0.6
LMX1B-202ENST00000373474 A0A0B4J2C4 111 aa11.29□□□□□ -0.6
LMX1B-202ENST00000373474 Q6ZSR3 168 aa11.29□□□□□ -0.6
LMX1B-202ENST00000373474 LINC01356Q8N9X3 169 aa11.29□□□□□ -0.6
LMX1B-202ENST00000373474 TINCRA0A1B0GVN0 87 aa11.29□□□□□ -0.6
LMX1B-202ENST00000373474 SDHAF1A6NFY7 115 aa11.29□□□□□ -0.6
LMX1B-202ENST00000373474 BAALC-AS2P0C853 105 aa11.29□□□□□ -0.6
LMX1B-202ENST00000373474 PSCAO43653 123 aa11.29□□□□□ -0.6
LMX1B-202ENST00000373474 NDUFS7O75251 213 aa11.28□□□□□ -0.6
LMX1B-202ENST00000373474 C8orf86Q6ZUL3 223 aa11.28□□□□□ -0.6
LMX1B-202ENST00000373474 RNF138Q8WVD3 245 aa11.28□□□□□ -0.6
LMX1B-202ENST00000373474 K7EM74 188 aa11.28□□□□□ -0.6
LMX1B-202ENST00000373474 WIPF2Q8TF74 440 aaPredicted RBP11.28□□□□□ -0.6
LMX1B-202ENST00000373474 hADV29S1A0JD25 119 aa11.27□□□□□ -0.6
LMX1B-202ENST00000373474 DKK1O94907 266 aa11.27□□□□□ -0.6
LMX1B-202ENST00000373474 KLF2Q9Y5W3 355 aaPredicted RBP11.27□□□□□ -0.6
LMX1B-202ENST00000373474 PRR30Q53SZ7 412 aaPredicted RBP11.27□□□□□ -0.61
LMX1B-202ENST00000373474 C8orf31Q8N9H6 132 aa11.27□□□□□ -0.61
LMX1B-202ENST00000373474 TEX48A0A1B0GUV7 120 aa11.27□□□□□ -0.61
LMX1B-202ENST00000373474 DIAPH2-AS1Q14236 149 aa11.27□□□□□ -0.61
LMX1B-202ENST00000373474 IGLC1P0CG04 106 aa11.26□□□□□ -0.61
LMX1B-202ENST00000373474 H3BQ85 93 aa11.26□□□□□ -0.61
LMX1B-202ENST00000373474 C11orf53Q8IXP5 236 aa11.26□□□□□ -0.61
LMX1B-202ENST00000373474 KLHL30-AS1Q8NEE0 82 aa11.26□□□□□ -0.61
LMX1B-202ENST00000373474 SVILO95425 2214 aa11.26□□□□□ -0.61
LMX1B-202ENST00000373474 SDK2Q58EX2 2172 aa11.26□□□□□ -0.61
LMX1B-202ENST00000373474 IGHV1-69DA0A0B4J2H0 117 aa11.26□□□□□ -0.61
LMX1B-202ENST00000373474 IGHV1-69P01742 117 aa11.26□□□□□ -0.61
LMX1B-202ENST00000373474 HEATR5AQ86XA9 2040 aa11.26□□□□□ -0.61
LMX1B-202ENST00000373474 TRAV26-2A0A0B4J265 109 aa11.26□□□□□ -0.61
LMX1B-202ENST00000373474 PRSS47A8MTI9 375 aa11.26□□□□□ -0.61
LMX1B-202ENST00000373474 IGLL5B9A064 214 aa11.26□□□□□ -0.61
LMX1B-202ENST00000373474 FGF23Q9GZV9 251 aaPredicted RBP11.26□□□□□ -0.61
LMX1B-202ENST00000373474 NDUFA4O00483 81 aa11.25□□□□□ -0.61
LMX1B-202ENST00000373474 RPL35AP18077 110 aaKnown RBP11.25□□□□□ -0.61
LMX1B-202ENST00000373474 ASPHD1Q5U4P2 390 aa11.25□□□□□ -0.61
LMX1B-202ENST00000373474 FOXI2Q6ZQN5 318 aa11.25□□□□□ -0.61
LMX1B-202ENST00000373474 K7ENP7 123 aa11.25□□□□□ -0.61
LMX1B-202ENST00000373474 LYPD6Q86Y78 171 aa11.25□□□□□ -0.61
LMX1B-202ENST00000373474 DENND4CQ5VZ89 1909 aa11.25□□□□□ -0.61
LMX1B-202ENST00000373474 G3V318 75 aa11.25□□□□□ -0.61
LMX1B-202ENST00000373474 COA6Q5JTJ3 125 aaKnown RBP11.25□□□□□ -0.61
LMX1B-202ENST00000373474 PLA2G2CQ5R387 149 aa11.25□□□□□ -0.61
LMX1B-202ENST00000373474 MSRB2Q9Y3D2 182 aa11.25□□□□□ -0.61
LMX1B-202ENST00000373474 A0A1B0GX51 115 aa11.24□□□□□ -0.61
LMX1B-202ENST00000373474 ZNF747Q9BV97 191 aa11.24□□□□□ -0.61
LMX1B-202ENST00000373474 SPATA25Q9BR10 227 aa11.24□□□□□ -0.61
LMX1B-202ENST00000373474 PTPRZ1P23471 2315 aaPredicted RBP11.24□□□□□ -0.61
LMX1B-202ENST00000373474 GATA3P23771 443 aa11.24□□□□□ -0.61
LMX1B-202ENST00000373474 UBE2E2Q96LR5 201 aa11.24□□□□□ -0.61
LMX1B-202ENST00000373474 TEN1Q86WV5 123 aa11.24□□□□□ -0.61
LMX1B-202ENST00000373474 IGHV1OR15-1A0A075B7D0 117 aa11.24□□□□□ -0.61
LMX1B-202ENST00000373474 MSMBP08118 114 aa11.24□□□□□ -0.61
LMX1B-202ENST00000373474 PSMB8P28062 276 aa11.24□□□□□ -0.61
LMX1B-202ENST00000373474 PLA2G2EQ9NZK7 142 aa11.24□□□□□ -0.61
LMX1B-202ENST00000373474 KAAG1Q9UBP8 84 aa11.24□□□□□ -0.61
LMX1B-202ENST00000373474 FAM215AQ9Y5M1 114 aa11.24□□□□□ -0.61
LMX1B-202ENST00000373474 HERV-K104P63124 156 aa11.23□□□□□ -0.61
LMX1B-202ENST00000373474 ANXA2RQ3ZCQ2 193 aa11.23□□□□□ -0.61
LMX1B-202ENST00000373474 DKK2Q9UBU2 259 aa11.23□□□□□ -0.61
LMX1B-202ENST00000373474 DEFB131AP59861 70 aa11.23□□□□□ -0.61
LMX1B-202ENST00000373474 ASXL3Q9C0F0 2248 aa11.23□□□□□ -0.61
LMX1B-202ENST00000373474 ATP5G1P05496 136 aa11.23□□□□□ -0.61
LMX1B-202ENST00000373474 RHOHQ15669 191 aa11.23□□□□□ -0.61
LMX1B-202ENST00000373474 WFDC9Q8NEX5 89 aa11.22□□□□□ -0.61
LMX1B-202ENST00000373474 FAM236AA0A1B0GUQ0 79 aa11.22□□□□□ -0.61
LMX1B-202ENST00000373474 FAM236BA0A1B0GV22 79 aa11.22□□□□□ -0.61
LMX1B-202ENST00000373474 MP68P56378 58 aa11.22□□□□□ -0.61
LMX1B-202ENST00000373474 ZNF493Q6ZR52 646 aa11.22□□□□□ -0.61
LMX1B-202ENST00000373474 KLK9Q9UKQ9 250 aa11.22□□□□□ -0.61
LMX1B-202ENST00000373474 H0YGX0 51 aa11.22□□□□□ -0.61
LMX1B-202ENST00000373474 SH2D6Q7Z4S9 175 aa11.21□□□□□ -0.61
LMX1B-202ENST00000373474 ATP6V0E2Q8NHE4 81 aa11.21□□□□□ -0.61
LMX1B-202ENST00000373474 CHKB-CPT1BH3BT56 60 aa11.21□□□□□ -0.61
LMX1B-202ENST00000373474 SPINK13Q1W4C9 94 aa11.21□□□□□ -0.61
LMX1B-202ENST00000373474 CDPF1Q6NVV7 123 aa11.21□□□□□ -0.61
LMX1B-202ENST00000373474 LINC01619G3V211 115 aa11.21□□□□□ -0.62
LMX1B-202ENST00000373474 NXPH4O95158 308 aa11.21□□□□□ -0.62
LMX1B-202ENST00000373474 ZNF491Q8N8L2 437 aa11.21□□□□□ -0.62
LMX1B-202ENST00000373474 SNRNP200O75643 2136 aaKnown RBP11.21□□□□□ -0.62
LMX1B-202ENST00000373474 CFHR4Q92496 578 aa11.21□□□□□ -0.62
LMX1B-202ENST00000373474 PRSS29PA6NIE9 313 aa11.2□□□□□ -0.62
LMX1B-202ENST00000373474 Q6ZVH6 145 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms